RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TAF1P21675 1872 aa12.55□□□□□ -0.4
NPLOC4-212ENST00000573328 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 CALD1Q05682 793 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
NPLOC4-212ENST00000573328 HOXB7P09629 217 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 GNAI1P63096 354 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 FSTL1Q12841 308 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-212ENST00000573328 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-212ENST00000573328 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
NPLOC4-212ENST00000573328 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
NPLOC4-212ENST00000573328 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
NPLOC4-212ENST00000573328 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-212ENST00000573328 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 ANP32CO43423 234 aa12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 TMX4Q9H1E5 349 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
NPLOC4-212ENST00000573328 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 IARSP41252 1262 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 TCIRG1Q13488 830 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
NPLOC4-212ENST00000573328 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 MYH3P11055 1940 aa12.49□□□□□ -0.41
NPLOC4-212ENST00000573328 ABCC4O15439 1325 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 HTRA3P83110 453 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 PSMD1Q99460 953 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 CACNA1FO60840 1977 aa12.48□□□□□ -0.41
NPLOC4-212ENST00000573328 SNED1Q8TER0 1413 aa12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 SPEF2Q9C093 1822 aa12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 POTECB2RU33 542 aa12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 LRRC37AA6NMS7 1700 aa12.47□□□□□ -0.41
NPLOC4-212ENST00000573328 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-212ENST00000573328 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-212ENST00000573328 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
NPLOC4-212ENST00000573328 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
NPLOC4-212ENST00000573328 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
NPLOC4-212ENST00000573328 TSR2Q969E8 191 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-212ENST00000573328 COL4A5P29400 1685 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 ATP6V0A2Q9Y487 856 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
NPLOC4-212ENST00000573328 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 GRAPQ13588 217 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 DPP8Q6V1X1 898 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 MYD88Q99836 296 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 HACL1Q9UJ83 578 aa12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-212ENST00000573328 FZD9O00144 591 aa12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 AOC3Q16853 763 aa12.43□□□□□ -0.42
NPLOC4-212ENST00000573328 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms