RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ERBB4Q15303 1308 aa19.43■□□□□ 0.7
NPLOC4-207ENST00000572346 PASKQ96RG2 1323 aa19.43■□□□□ 0.7
NPLOC4-207ENST00000572346 GIGYF2Q6Y7W6 1299 aaKnown RBP19.42■□□□□ 0.7
NPLOC4-207ENST00000572346 ZNF34Q8IZ26 560 aa19.42■□□□□ 0.7
NPLOC4-207ENST00000572346 TSPYL4Q9UJ04 414 aa19.42■□□□□ 0.7
NPLOC4-207ENST00000572346 HACL1Q9UJ83 578 aa19.42■□□□□ 0.7
NPLOC4-207ENST00000572346 HOXA10P31260 410 aaPredicted RBP19.41■□□□□ 0.7
NPLOC4-207ENST00000572346 EAPPQ56P03 285 aaPredicted RBP19.41■□□□□ 0.7
NPLOC4-207ENST00000572346 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
NPLOC4-207ENST00000572346 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
NPLOC4-207ENST00000572346 MKRN1Q9UHC7 482 aaKnown RBP19.41■□□□□ 0.7
NPLOC4-207ENST00000572346 ADAMTSL1Q8N6G6 1762 aa19.41■□□□□ 0.7
NPLOC4-207ENST00000572346 NTSR2O95665 410 aa19.4■□□□□ 0.7
NPLOC4-207ENST00000572346 LRP10Q7Z4F1 713 aa19.4■□□□□ 0.7
NPLOC4-207ENST00000572346 TNS4Q8IZW8 715 aa19.4■□□□□ 0.7
NPLOC4-207ENST00000572346 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
NPLOC4-207ENST00000572346 ITGBL1O95965 494 aaPredicted RBP19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 EPHX2P34913 555 aa19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 RIPK4P57078 832 aa19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 PDIA6Q15084 440 aa19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 GPC2Q8N158 579 aa19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 JDP2Q8WYK2 163 aa19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 COL4A5P29400 1685 aa19.39■□□□□ 0.69
NPLOC4-207ENST00000572346 EIF2S2P20042 333 aaKnown RBP19.38■□□□□ 0.69
NPLOC4-207ENST00000572346 CRAMP1Q96RY5 1269 aa19.38■□□□□ 0.69
NPLOC4-207ENST00000572346 CLEC11AQ9Y240 323 aa19.38■□□□□ 0.69
NPLOC4-207ENST00000572346 CNTNAP1P78357 1384 aa19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 PARP10Q53GL7 1025 aa19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 C3orf67Q6ZVT6 689 aa19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 PPP1R42Q7Z4L9 355 aa19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 SLC51AQ86UW1 340 aa19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 PNMA8AQ86V59 439 aaPredicted RBP19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
NPLOC4-207ENST00000572346 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 ANXA1P04083 346 aa19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 PROSER3Q2NL68 480 aa19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 GRIPAP1Q4V328 841 aa19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
NPLOC4-207ENST00000572346 TMEM88BA6NKF7 163 aa19.35■□□□□ 0.69
NPLOC4-207ENST00000572346 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
NPLOC4-207ENST00000572346 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
NPLOC4-207ENST00000572346 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
NPLOC4-207ENST00000572346 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 MAP1SQ66K74 1059 aaPredicted RBP19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 LARGE2Q8N3Y3 721 aa19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 UTP14AQ9BVJ6 771 aaKnown RBP19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 GJA3Q9Y6H8 435 aa19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 ANKRD36CQ5JPF3 1778 aa19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 LTBP1Q14766 1721 aa19.34■□□□□ 0.69
NPLOC4-207ENST00000572346 CAPN15O75808 1086 aa19.33■□□□□ 0.68
NPLOC4-207ENST00000572346 SLC10A5Q5PT55 438 aa19.33■□□□□ 0.68
NPLOC4-207ENST00000572346 CNTROBQ8N137 903 aa19.33■□□□□ 0.68
NPLOC4-207ENST00000572346 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
NPLOC4-207ENST00000572346 COPS6Q7L5N1 327 aa19.32■□□□□ 0.68
NPLOC4-207ENST00000572346 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
NPLOC4-207ENST00000572346 VEGFBP49765 207 aa19.31■□□□□ 0.68
NPLOC4-207ENST00000572346 SCNN1DP51172 638 aa19.31■□□□□ 0.68
NPLOC4-207ENST00000572346 ATP6V0A2Q9Y487 856 aa19.31■□□□□ 0.68
NPLOC4-207ENST00000572346 LAMB2P55268 1798 aa19.31■□□□□ 0.68
NPLOC4-207ENST00000572346 ABCC4O15439 1325 aa19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 LMOD1P29536 600 aaPredicted RBP19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 NEUROD2Q15784 382 aa19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 NIM1KQ8IY84 436 aa19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 XAGE3Q8WTP9 111 aa19.3■□□□□ 0.68
NPLOC4-207ENST00000572346 FOXN1O15353 648 aa19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 PPIP5K2O43314 1243 aa19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 EPS15P42566 896 aa19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 KRT24Q2M2I5 525 aa19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 NLRP10Q86W26 655 aa19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 MIER1Q8N108 512 aa19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 TMX4Q9H1E5 349 aaPredicted RBP19.29■□□□□ 0.68
NPLOC4-207ENST00000572346 CHL1O00533 1208 aa19.28■□□□□ 0.68
NPLOC4-207ENST00000572346 TCIRG1Q13488 830 aa19.28■□□□□ 0.68
NPLOC4-207ENST00000572346 AOC3Q16853 763 aa19.28■□□□□ 0.68
NPLOC4-207ENST00000572346 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
NPLOC4-207ENST00000572346 DDX21Q9NR30 783 aaKnown RBP eCLIP19.28■□□□□ 0.68
NPLOC4-207ENST00000572346 RASSF10A6NK89 507 aa19.27■□□□□ 0.68
NPLOC4-207ENST00000572346 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
NPLOC4-207ENST00000572346 HCLS1P14317 486 aaPredicted RBP19.27■□□□□ 0.68
NPLOC4-207ENST00000572346 RTFDC1Q9BY42 306 aaPredicted RBP19.27■□□□□ 0.68
NPLOC4-207ENST00000572346 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.68
NPLOC4-207ENST00000572346 BBOX1O75936 387 aa19.26■□□□□ 0.67
NPLOC4-207ENST00000572346 DEFB115Q30KQ5 88 aa19.26■□□□□ 0.67
NPLOC4-207ENST00000572346 TRMT112Q9UI30 125 aaKnown RBP19.26■□□□□ 0.67
NPLOC4-207ENST00000572346 SH3TC1Q8TE82 1336 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 TAF1P21675 1872 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 USP50Q70EL3 339 aaPredicted RBP19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 SP8Q8IXZ3 490 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 SUPT20HQ8NEM7 779 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 LAS1LQ9Y4W2 734 aaKnown RBP19.25■□□□□ 0.67
NPLOC4-207ENST00000572346 FMR1Q06787 632 aaKnown RBP eCLIP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms