RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 DDX21Q9NR30 783 aaKnown RBP eCLIP22.61■■□□□ 1.21
LITAF-211ENST00000572255 HOXA10P31260 410 aaPredicted RBP22.6■■□□□ 1.21
LITAF-211ENST00000572255 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
LITAF-211ENST00000572255 CFAP44Q96MT7 982 aa22.59■■□□□ 1.21
LITAF-211ENST00000572255 ZNF277Q9NRM2 450 aaPredicted RBP22.59■■□□□ 1.21
LITAF-211ENST00000572255 APAF1O14727 1248 aa22.58■■□□□ 1.21
LITAF-211ENST00000572255 HOXB7P09629 217 aa22.58■■□□□ 1.21
LITAF-211ENST00000572255 HDGFL1Q5TGJ6 251 aa22.58■■□□□ 1.21
LITAF-211ENST00000572255 DNAJC5GQ8N7S2 189 aa22.58■■□□□ 1.21
LITAF-211ENST00000572255 UTP14AQ9BVJ6 771 aaKnown RBP22.58■■□□□ 1.21
LITAF-211ENST00000572255 CHPF2Q9P2E5 772 aa22.58■■□□□ 1.21
LITAF-211ENST00000572255 SNED1Q8TER0 1413 aa22.57■■□□□ 1.2
LITAF-211ENST00000572255 DDNO94850 711 aaPredicted RBP22.57■■□□□ 1.2
LITAF-211ENST00000572255 HSP90AB3PQ58FF7 597 aa22.57■■□□□ 1.2
LITAF-211ENST00000572255 C3orf67Q6ZVT6 689 aa22.57■■□□□ 1.2
LITAF-211ENST00000572255 SYNE4Q8N205 404 aa22.56■■□□□ 1.2
LITAF-211ENST00000572255 RBM17Q96I25 401 aaKnown RBP22.56■■□□□ 1.2
LITAF-211ENST00000572255 CRAMP1Q96RY5 1269 aa22.56■■□□□ 1.2
LITAF-211ENST00000572255 MBIPQ9NS73 344 aa22.56■■□□□ 1.2
LITAF-211ENST00000572255 RNF123Q5XPI4 1314 aa22.56■■□□□ 1.2
LITAF-211ENST00000572255 HTRA3P83110 453 aa22.55■■□□□ 1.2
LITAF-211ENST00000572255 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
LITAF-211ENST00000572255 CC2D2BQ6DHV5 1058 aa22.55■■□□□ 1.2
LITAF-211ENST00000572255 NLRP10Q86W26 655 aa22.55■■□□□ 1.2
LITAF-211ENST00000572255 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
LITAF-211ENST00000572255 LAMB2P55268 1798 aa22.54■■□□□ 1.2
LITAF-211ENST00000572255 ZNF853P0CG23 659 aa22.54■■□□□ 1.2
LITAF-211ENST00000572255 IARSP41252 1262 aaKnown RBP22.54■■□□□ 1.2
LITAF-211ENST00000572255 TCIRG1Q13488 830 aa22.54■■□□□ 1.2
LITAF-211ENST00000572255 DUSP27Q5VZP5 1158 aa22.54■■□□□ 1.2
LITAF-211ENST00000572255 PSMD1Q99460 953 aa22.54■■□□□ 1.2
LITAF-211ENST00000572255 DBF4Q9UBU7 674 aaPredicted RBP22.54■■□□□ 1.2
LITAF-211ENST00000572255 PPEF1O14829 653 aaPredicted RBP22.53■■□□□ 1.2
LITAF-211ENST00000572255 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
LITAF-211ENST00000572255 IFT57Q9NWB7 429 aa22.53■■□□□ 1.2
LITAF-211ENST00000572255 ZNF541Q9H0D2 1346 aa22.53■■□□□ 1.2
LITAF-211ENST00000572255 CALD1Q05682 793 aaKnown RBP22.52■■□□□ 1.2
LITAF-211ENST00000572255 SCN4AP35499 1836 aa22.52■■□□□ 1.2
LITAF-211ENST00000572255 GNAI1P63096 354 aa22.51■■□□□ 1.19
LITAF-211ENST00000572255 SLC51AQ86UW1 340 aa22.51■■□□□ 1.19
LITAF-211ENST00000572255 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
LITAF-211ENST00000572255 L3MBTL3Q96JM7 780 aaPredicted RBP22.51■■□□□ 1.19
LITAF-211ENST00000572255 IQCA1LA6NCM1 817 aa22.5■■□□□ 1.19
LITAF-211ENST00000572255 TCERG1O14776 1098 aaKnown RBP22.5■■□□□ 1.19
LITAF-211ENST00000572255 HCLS1P14317 486 aaPredicted RBP22.5■■□□□ 1.19
LITAF-211ENST00000572255 GRIPAP1Q4V328 841 aa22.5■■□□□ 1.19
LITAF-211ENST00000572255 CCDC184Q52MB2 194 aa22.5■■□□□ 1.19
LITAF-211ENST00000572255 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
LITAF-211ENST00000572255 TRMT112Q9UI30 125 aaKnown RBP22.5■■□□□ 1.19
LITAF-211ENST00000572255 FZD9O00144 591 aa22.49■■□□□ 1.19
LITAF-211ENST00000572255 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
LITAF-211ENST00000572255 KLRG1Q96E93 195 aa22.49■■□□□ 1.19
LITAF-211ENST00000572255 ABCC4O15439 1325 aa22.49■■□□□ 1.19
LITAF-211ENST00000572255 SH3TC1Q8TE82 1336 aa22.49■■□□□ 1.19
LITAF-211ENST00000572255 COL4A5P29400 1685 aa22.49■■□□□ 1.19
LITAF-211ENST00000572255 POTEIP0CG38 1075 aa22.48■■□□□ 1.19
LITAF-211ENST00000572255 POTEJP0CG39 1038 aa22.48■■□□□ 1.19
LITAF-211ENST00000572255 JDP2Q8WYK2 163 aa22.48■■□□□ 1.19
LITAF-211ENST00000572255 CHADLQ6NUI6 762 aa22.47■■□□□ 1.19
LITAF-211ENST00000572255 ZNF428Q96B54 188 aa22.47■■□□□ 1.19
LITAF-211ENST00000572255 TAF1DQ9H5J8 278 aaPredicted RBP22.47■■□□□ 1.19
LITAF-211ENST00000572255 ATP6V0A2Q9Y487 856 aa22.47■■□□□ 1.19
LITAF-211ENST00000572255 DDX60Q8IY21 1712 aaKnown RBP22.46■■□□□ 1.19
LITAF-211ENST00000572255 ISCA1Q9BUE6 129 aa22.46■■□□□ 1.19
LITAF-211ENST00000572255 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
LITAF-211ENST00000572255 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
LITAF-211ENST00000572255 LARGE2Q8N3Y3 721 aa22.45■■□□□ 1.18
LITAF-211ENST00000572255 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
LITAF-211ENST00000572255 GPC2Q8N158 579 aa22.44■■□□□ 1.18
LITAF-211ENST00000572255 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
LITAF-211ENST00000572255 HACL1Q9UJ83 578 aa22.44■■□□□ 1.18
LITAF-211ENST00000572255 TAF1P21675 1872 aa22.43■■□□□ 1.18
LITAF-211ENST00000572255 BBOX1O75936 387 aa22.43■■□□□ 1.18
LITAF-211ENST00000572255 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
LITAF-211ENST00000572255 DDX46Q7L014 1031 aaKnown RBP22.43■■□□□ 1.18
LITAF-211ENST00000572255 LDHDQ86WU2 507 aa22.43■■□□□ 1.18
LITAF-211ENST00000572255 GOLGA2Q08379 1002 aa22.42■■□□□ 1.18
LITAF-211ENST00000572255 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
LITAF-211ENST00000572255 PHAXQ9H814 394 aaKnown RBP22.42■■□□□ 1.18
LITAF-211ENST00000572255 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
LITAF-211ENST00000572255 EPHX2P34913 555 aa22.41■■□□□ 1.18
LITAF-211ENST00000572255 TRIM28Q13263 835 aaKnown RBP22.41■■□□□ 1.18
LITAF-211ENST00000572255 GRAPQ13588 217 aa22.41■■□□□ 1.18
LITAF-211ENST00000572255 EAPPQ56P03 285 aaPredicted RBP22.41■■□□□ 1.18
LITAF-211ENST00000572255 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
LITAF-211ENST00000572255 SP8Q8IXZ3 490 aa22.41■■□□□ 1.18
LITAF-211ENST00000572255 JMYQ8N9B5 988 aa22.41■■□□□ 1.18
LITAF-211ENST00000572255 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
LITAF-211ENST00000572255 GJA3Q9Y6H8 435 aa22.41■■□□□ 1.18
LITAF-211ENST00000572255 PPIP5K2O43314 1243 aa22.4■■□□□ 1.18
LITAF-211ENST00000572255 AOC3Q16853 763 aa22.4■■□□□ 1.18
LITAF-211ENST00000572255 NIM1KQ8IY84 436 aa22.4■■□□□ 1.18
LITAF-211ENST00000572255 RTFDC1Q9BY42 306 aaPredicted RBP22.4■■□□□ 1.18
LITAF-211ENST00000572255 ADAMTSL1Q8N6G6 1762 aa22.4■■□□□ 1.18
LITAF-211ENST00000572255 CCDC27Q2M243 656 aa22.39■■□□□ 1.17
LITAF-211ENST00000572255 DPP8Q6V1X1 898 aaPredicted RBP22.39■■□□□ 1.17
LITAF-211ENST00000572255 SUPT20HQ8NEM7 779 aa22.39■■□□□ 1.17
LITAF-211ENST00000572255 VPS33BQ9H267 617 aa22.39■■□□□ 1.17
LITAF-211ENST00000572255 LRRC37AA6NMS7 1700 aa22.38■■□□□ 1.17
LITAF-211ENST00000572255 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms