RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 RUFY2Q8WXA3 655 aa19.87■□□□□ 0.77
LITAF-209ENST00000571688 KCND1Q9NSA2 647 aa19.86■□□□□ 0.77
LITAF-209ENST00000571688 NAP1L2Q9ULW6 460 aaPredicted RBP19.86■□□□□ 0.77
LITAF-209ENST00000571688 LRRC37A3O60309 1634 aa19.86■□□□□ 0.77
LITAF-209ENST00000571688 TULP2O00295 520 aa19.86■□□□□ 0.77
LITAF-209ENST00000571688 ARID5BQ14865 1188 aa19.86■□□□□ 0.77
LITAF-209ENST00000571688 NECTIN1Q15223 517 aa19.86■□□□□ 0.77
LITAF-209ENST00000571688 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
LITAF-209ENST00000571688 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
LITAF-209ENST00000571688 ZNF446Q9NWS9 450 aa19.86■□□□□ 0.77
LITAF-209ENST00000571688 NCKAP5LQ9HCH0 1330 aa19.85■□□□□ 0.77
LITAF-209ENST00000571688 SLU7O95391 586 aaKnown RBP19.85■□□□□ 0.77
LITAF-209ENST00000571688 RNF20Q5VTR2 975 aa19.85■□□□□ 0.77
LITAF-209ENST00000571688 CCDC61Q9Y6R9 512 aa19.85■□□□□ 0.77
LITAF-209ENST00000571688 SKILP12757 684 aa19.85■□□□□ 0.77
LITAF-209ENST00000571688 CCZ1BP86790 482 aa19.85■□□□□ 0.77
LITAF-209ENST00000571688 CCZ1P86791 482 aaPredicted RBP19.85■□□□□ 0.77
LITAF-209ENST00000571688 PGBD1Q96JS3 809 aa19.85■□□□□ 0.77
LITAF-209ENST00000571688 ST7Q9NRC1 585 aa19.84■□□□□ 0.77
LITAF-209ENST00000571688 TFIP11Q9UBB9 837 aaKnown RBP19.84■□□□□ 0.77
LITAF-209ENST00000571688 TTC41PQ6P2S7 1318 aa19.84■□□□□ 0.77
LITAF-209ENST00000571688 NALCNQ8IZF0 1738 aa19.84■□□□□ 0.77
LITAF-209ENST00000571688 HSP90AB2PQ58FF8 381 aa19.84■□□□□ 0.77
LITAF-209ENST00000571688 ERICH4A6NGS2 130 aa19.83■□□□□ 0.77
LITAF-209ENST00000571688 VGLL3A8MV65 326 aa19.83■□□□□ 0.77
LITAF-209ENST00000571688 GLRX3O76003 335 aaKnown RBP19.83■□□□□ 0.77
LITAF-209ENST00000571688 CCAR2Q8N163 923 aaKnown RBP19.83■□□□□ 0.77
LITAF-209ENST00000571688 OVOS2A0A0J9YW53 1432 aa19.83■□□□□ 0.77
LITAF-209ENST00000571688 OVOS2Q6IE36 1432 aa19.83■□□□□ 0.77
LITAF-209ENST00000571688 GOLGA6L19H0YKK7 550 aa19.83■□□□□ 0.76
LITAF-209ENST00000571688 IPO4Q8TEX9 1081 aaKnown RBP19.83■□□□□ 0.76
LITAF-209ENST00000571688 MAP3K19Q56UN5 1328 aa19.83■□□□□ 0.76
LITAF-209ENST00000571688 H2AFXP16104 143 aaPredicted RBP19.82■□□□□ 0.76
LITAF-209ENST00000571688 CCDC69A6NI79 296 aa19.82■□□□□ 0.76
LITAF-209ENST00000571688 ZKSCAN1P17029 563 aaPredicted RBP19.82■□□□□ 0.76
LITAF-209ENST00000571688 CYP2C19P33261 490 aa19.82■□□□□ 0.76
LITAF-209ENST00000571688 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
LITAF-209ENST00000571688 DDX54Q8TDD1 881 aaKnown RBP19.82■□□□□ 0.76
LITAF-209ENST00000571688 KIF2AO00139 706 aaPredicted RBP19.81■□□□□ 0.76
LITAF-209ENST00000571688 BMS1Q14692 1282 aaKnown RBP19.81■□□□□ 0.76
LITAF-209ENST00000571688 LARP1Q6PKG0 1096 aaKnown RBP19.81■□□□□ 0.76
LITAF-209ENST00000571688 GIGYF1O75420 1035 aaPredicted RBP19.81■□□□□ 0.76
LITAF-209ENST00000571688 CREB3L3Q68CJ9 461 aa19.81■□□□□ 0.76
LITAF-209ENST00000571688 C11orf57Q6ZUT1 292 aaPredicted RBP19.81■□□□□ 0.76
LITAF-209ENST00000571688 NECTIN2Q92692 538 aa19.81■□□□□ 0.76
LITAF-209ENST00000571688 DNAJC2Q99543 621 aaKnown RBP19.81■□□□□ 0.76
LITAF-209ENST00000571688 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
LITAF-209ENST00000571688 SRGAP3O43295 1099 aa19.8■□□□□ 0.76
LITAF-209ENST00000571688 NOL10Q9BSC4 688 aaKnown RBP19.8■□□□□ 0.76
LITAF-209ENST00000571688 L2HGDHQ9H9P8 463 aa19.8■□□□□ 0.76
LITAF-209ENST00000571688 RBM8AQ9Y5S9 174 aaKnown RBP19.8■□□□□ 0.76
LITAF-209ENST00000571688 CAPN2P17655 700 aa19.8■□□□□ 0.76
LITAF-209ENST00000571688 TRMT1Q9NXH9 659 aaKnown RBP19.8■□□□□ 0.76
LITAF-209ENST00000571688 ADCY9O60503 1353 aa19.79■□□□□ 0.76
LITAF-209ENST00000571688 RAPGEF3O95398 923 aa19.79■□□□□ 0.76
LITAF-209ENST00000571688 USP16Q9Y5T5 823 aa19.79■□□□□ 0.76
LITAF-209ENST00000571688 PSMA5P28066 241 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 COL9A3Q14050 684 aaPredicted RBP19.78■□□□□ 0.76
LITAF-209ENST00000571688 FBXO31Q5XUX0 539 aaPredicted RBP19.78■□□□□ 0.76
LITAF-209ENST00000571688 ALDH8A1Q9H2A2 487 aaPredicted RBP19.78■□□□□ 0.76
LITAF-209ENST00000571688 FHOD1Q9Y613 1164 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 KDRP35968 1356 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 ANKRD1Q15327 319 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 STX1AQ16623 288 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 HSP90AB4PQ58FF6 505 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 MAP4K1Q92918 833 aa19.78■□□□□ 0.76
LITAF-209ENST00000571688 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
LITAF-209ENST00000571688 NRXN3Q9Y4C0 1643 aa19.76■□□□□ 0.75
LITAF-209ENST00000571688 SLC27A2O14975 620 aa19.76■□□□□ 0.75
LITAF-209ENST00000571688 RESTQ13127 1097 aa19.76■□□□□ 0.75
LITAF-209ENST00000571688 FILIP1Q7Z7B0 1213 aa19.76■□□□□ 0.75
LITAF-209ENST00000571688 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
LITAF-209ENST00000571688 NEO1Q92859 1461 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 USP31Q70CQ4 1352 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 CTAGE5O15320 804 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
LITAF-209ENST00000571688 TOB2Q14106 344 aaPredicted RBP19.75■□□□□ 0.75
LITAF-209ENST00000571688 ERCC6LQ2NKX8 1250 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 CCDC93Q567U6 631 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 DHX40Q8IX18 779 aaKnown RBP19.75■□□□□ 0.75
LITAF-209ENST00000571688 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.75■□□□□ 0.75
LITAF-209ENST00000571688 MYH15Q9Y2K3 1946 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 A2ML1A8K2U0 1454 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 CLCN6P51797 869 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 GSDMDP57764 484 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 ECHDC1Q9NTX5 307 aa19.75■□□□□ 0.75
LITAF-209ENST00000571688 RPS6KB1P23443 525 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 HNRNPH2P55795 449 aaKnown RBP19.74■□□□□ 0.75
LITAF-209ENST00000571688 SNW1Q13573 536 aaKnown RBP19.74■□□□□ 0.75
LITAF-209ENST00000571688 BLOC1S2Q6QNY1 142 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 EVI5LQ96CN4 794 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 NPHP4O75161 1426 aaPredicted RBP19.74■□□□□ 0.75
LITAF-209ENST00000571688 RICTORQ6R327 1708 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 NBPF7P0C2Y1 421 aaPredicted RBP19.74■□□□□ 0.75
LITAF-209ENST00000571688 GTF3C6Q969F1 213 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 TSPYL1Q9H0U9 437 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
LITAF-209ENST00000571688 SNRKQ9NRH2 765 aa19.74■□□□□ 0.75
LITAF-209ENST00000571688 BECN2A8MW95 431 aa19.73■□□□□ 0.75
LITAF-209ENST00000571688 NPHP1O15259 732 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms