RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 ALYREFQ86V81 257 aaKnown RBP6.18□□□□□ -1.42
CDC27-211ENST00000570740 ELOA3Q8NG57 546 aa6.18□□□□□ -1.42
CDC27-211ENST00000570740 KCNH4Q9UQ05 1017 aa6.18□□□□□ -1.42
CDC27-211ENST00000570740 ADARB2-AS1A8MUL3 147 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 GNB5O14775 395 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 FOXO3O43524 673 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 ITGB2P05107 769 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 COL8A1P27658 744 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 ELOAQ14241 798 aaKnown RBP6.17□□□□□ -1.42
CDC27-211ENST00000570740 IER5Q5VY09 327 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 TNFRSF25Q93038 417 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
CDC27-211ENST00000570740 NOVA2Q9UNW9 492 aaKnown RBP6.17□□□□□ -1.42
CDC27-211ENST00000570740 TGFBR3LH3BV60 316 aa6.16□□□□□ -1.42
CDC27-211ENST00000570740 ALAS2P22557 587 aa6.16□□□□□ -1.42
CDC27-211ENST00000570740 SRPK2P78362 688 aaKnown RBP6.16□□□□□ -1.42
CDC27-211ENST00000570740 NEUROD1Q13562 356 aa6.16□□□□□ -1.42
CDC27-211ENST00000570740 DMGDHQ9UI17 866 aaKnown RBP6.16□□□□□ -1.42
CDC27-211ENST00000570740 BCS1LQ9Y276 419 aa6.16□□□□□ -1.42
CDC27-211ENST00000570740 KRBA1A5PL33 1030 aa6.15□□□□□ -1.42
CDC27-211ENST00000570740 SWI5Q1ZZU3 235 aa6.15□□□□□ -1.42
CDC27-211ENST00000570740 RAB44Q7Z6P3 723 aaPredicted RBP6.15□□□□□ -1.42
CDC27-211ENST00000570740 QTRT2Q9H974 415 aaKnown RBP6.15□□□□□ -1.42
CDC27-211ENST00000570740 ZMIZ1Q9ULJ6 1067 aa6.15□□□□□ -1.42
CDC27-211ENST00000570740 GTF3C3Q9Y5Q9 886 aa6.15□□□□□ -1.42
CDC27-211ENST00000570740 ACIN1Q9UKV3 1341 aaKnown RBP6.15□□□□□ -1.43
CDC27-211ENST00000570740 VTI1AQ96AJ9 217 aa6.14□□□□□ -1.43
CDC27-211ENST00000570740 MYO19Q96H55 970 aa6.14□□□□□ -1.43
CDC27-211ENST00000570740 EFCC1Q9HA90 598 aa6.14□□□□□ -1.43
CDC27-211ENST00000570740 NOP53Q9NZM5 478 aaKnown RBP6.14□□□□□ -1.43
CDC27-211ENST00000570740 KLK14Q9P0G3 267 aa6.14□□□□□ -1.43
CDC27-211ENST00000570740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.13□□□□□ -1.43
CDC27-211ENST00000570740 MSTNO14793 375 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 ATG7O95352 703 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 FAM69CQ0P6D2 419 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 DGKZQ13574 1117 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 BHMTQ93088 406 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 SPOCK3Q9BQ16 436 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 GSX2Q9BZM3 304 aa6.13□□□□□ -1.43
CDC27-211ENST00000570740 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.13□□□□□ -1.43
CDC27-211ENST00000570740 PROCP04070 461 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 INPP5BP32019 993 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 ADH7P40394 386 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 FKBP5Q13451 457 aaPredicted RBP6.12□□□□□ -1.43
CDC27-211ENST00000570740 C11orf91Q3C1V1 193 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 STK32AQ8WU08 396 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 TRIM11Q96F44 468 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 STARD13Q9Y3M8 1113 aa6.12□□□□□ -1.43
CDC27-211ENST00000570740 EPB42P16452 691 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
CDC27-211ENST00000570740 IDH3AP50213 366 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 CCINQ13939 588 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 OCLNQ16625 522 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 PRIMPOLQ96LW4 560 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 PLVAPQ9BX97 442 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 PRDM6Q9NQX0 595 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 SERPINA10Q9UK55 444 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 LRFN2Q9ULH4 789 aa6.11□□□□□ -1.43
CDC27-211ENST00000570740 SHROOM4Q9ULL8 1493 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 M0R082 166 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 PRMT3O60678 531 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 MICAL2O94851 1124 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 ALBP02768 609 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 ARSDP51689 593 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 COL9A3Q14050 684 aaPredicted RBP6.1□□□□□ -1.43
CDC27-211ENST00000570740 SUZ12Q15022 739 aaKnown RBP6.1□□□□□ -1.43
CDC27-211ENST00000570740 C20orf204Q6ZNR8 217 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 MICALL1Q8N3F8 863 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 ZNF417Q8TAU3 575 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 PBXIP1Q96AQ6 731 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 CCDC97Q96F63 343 aaPredicted RBP6.1□□□□□ -1.43
CDC27-211ENST00000570740 ZNF587Q96SQ5 575 aaPredicted RBP6.1□□□□□ -1.43
CDC27-211ENST00000570740 UBE2OQ9C0C9 1292 aaKnown RBP6.1□□□□□ -1.43
CDC27-211ENST00000570740 C11orf16Q9NQ32 467 aa6.1□□□□□ -1.43
CDC27-211ENST00000570740 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.1□□□□□ -1.43
CDC27-211ENST00000570740 COX20Q5RI15 118 aa6.09□□□□□ -1.43
CDC27-211ENST00000570740 TMEM164Q5U3C3 297 aa6.09□□□□□ -1.43
CDC27-211ENST00000570740 IFT43Q96FT9 208 aa6.09□□□□□ -1.43
CDC27-211ENST00000570740 PNMA5Q96PV4 448 aa6.09□□□□□ -1.43
CDC27-211ENST00000570740 UNC13AQ9UPW8 1703 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 SPDYE3A6NKU9 549 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 OPLAHO14841 1288 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 NFKB1P19838 968 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 C8orf86Q6ZUL3 223 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 CLP1Q92989 425 aaKnown RBP6.08□□□□□ -1.44
CDC27-211ENST00000570740 COL26A1Q96A83 441 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
CDC27-211ENST00000570740 SLC6A14Q9UN76 642 aa6.08□□□□□ -1.44
CDC27-211ENST00000570740 ARID3CA6NKF2 412 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 C1QTNF9BB2RNN3 333 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 MAP3K6O95382 1288 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 SPATA31C1P0DKV0 1188 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 NID1P14543 1247 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 TBC1D8BQ0IIM8 1120 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 IGFLR1Q9H665 355 aa6.07□□□□□ -1.44
CDC27-211ENST00000570740 DNAJB12Q9NXW2 375 aaKnown RBP6.07□□□□□ -1.44
CDC27-211ENST00000570740 PTCD1O75127 700 aaKnown RBP6.06□□□□□ -1.44
CDC27-211ENST00000570740 CHRNA4P43681 627 aa6.06□□□□□ -1.44
CDC27-211ENST00000570740 C16orf46Q6P387 395 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms