RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
CTDNEP1-202ENST00000570380 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 DIAPH1O60610 1272 aaKnown RBP14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 SOX10P56693 466 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 SLC51AQ86UW1 340 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 LARGE2Q8N3Y3 721 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 GLIS2Q9BZE0 524 aaPredicted RBP14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 GPRC5DQ9NZD1 345 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 KNSTRNQ9Y448 316 aa14.13□□□□□ -0.15
CTDNEP1-202ENST00000570380 CEMIPQ8WUJ3 1361 aa14.12□□□□□ -0.15
CTDNEP1-202ENST00000570380 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
CTDNEP1-202ENST00000570380 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
CTDNEP1-202ENST00000570380 ABCC12Q96J65 1359 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 NBPF26B4DH59 902 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 RGL2O15211 777 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 HLFQ16534 295 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 NBPF10Q6P3W6 841 aaKnown RBP14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 NBPF15Q8N660 670 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 PGAP2Q9UHJ9 254 aa14.11□□□□□ -0.15
CTDNEP1-202ENST00000570380 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
CTDNEP1-202ENST00000570380 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
CTDNEP1-202ENST00000570380 NIM1KQ8IY84 436 aa14.1□□□□□ -0.15
CTDNEP1-202ENST00000570380 ZNF408Q9H9D4 720 aa14.1□□□□□ -0.15
CTDNEP1-202ENST00000570380 HOXA10P31260 410 aaPredicted RBP14.09□□□□□ -0.15
CTDNEP1-202ENST00000570380 NOGQ13253 232 aa14.09□□□□□ -0.15
CTDNEP1-202ENST00000570380 GRIPAP1Q4V328 841 aa14.09□□□□□ -0.15
CTDNEP1-202ENST00000570380 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
CTDNEP1-202ENST00000570380 TCERG1O14776 1098 aaKnown RBP14.08□□□□□ -0.16
CTDNEP1-202ENST00000570380 PPIP5K2O43314 1243 aa14.08□□□□□ -0.16
CTDNEP1-202ENST00000570380 SNRPA1P09661 255 aaKnown RBP14.08□□□□□ -0.16
CTDNEP1-202ENST00000570380 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
CTDNEP1-202ENST00000570380 HIRAP54198 1017 aaPredicted RBP14.08□□□□□ -0.16
CTDNEP1-202ENST00000570380 CXCL9Q07325 125 aa14.08□□□□□ -0.16
CTDNEP1-202ENST00000570380 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
CTDNEP1-202ENST00000570380 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
CTDNEP1-202ENST00000570380 GMPSP49915 693 aaPredicted RBP14.07□□□□□ -0.16
CTDNEP1-202ENST00000570380 AOC3Q16853 763 aa14.07□□□□□ -0.16
CTDNEP1-202ENST00000570380 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
CTDNEP1-202ENST00000570380 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
CTDNEP1-202ENST00000570380 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 HUNKP57058 714 aa14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 CDC37L1Q7L3B6 337 aa14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 ZC3H15Q8WU90 426 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 NYXQ9GZU5 481 aa14.06□□□□□ -0.16
CTDNEP1-202ENST00000570380 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 U2SURPO15042 1029 aaKnown RBP14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 PHACTR3Q96KR7 559 aa14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 SAGE1Q9NXZ1 904 aa14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 ZNRF3Q9ULT6 936 aa14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 TIMELESSQ9UNS1 1208 aa14.05□□□□□ -0.16
CTDNEP1-202ENST00000570380 USP48Q86UV5 1035 aa14.04□□□□□ -0.16
CTDNEP1-202ENST00000570380 RBM17Q96I25 401 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-202ENST00000570380 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
CTDNEP1-202ENST00000570380 LAMB2P55268 1798 aa14.04□□□□□ -0.16
CTDNEP1-202ENST00000570380 SHTN1A0MZ66 631 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 TRPA1O75762 1119 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 RGMBQ6NW40 437 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 CDHR2Q9BYE9 1310 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 TAF1P21675 1872 aa14.03□□□□□ -0.16
CTDNEP1-202ENST00000570380 UBN2Q6ZU65 1347 aa14.02□□□□□ -0.17
CTDNEP1-202ENST00000570380 ERVV-1B6SEH8 477 aa14.02□□□□□ -0.17
CTDNEP1-202ENST00000570380 SUSD4Q5VX71 490 aa14.02□□□□□ -0.17
CTDNEP1-202ENST00000570380 NGEFQ8N5V2 710 aa14.02□□□□□ -0.17
CTDNEP1-202ENST00000570380 BCL2L13Q9BXK5 485 aa14.02□□□□□ -0.17
CTDNEP1-202ENST00000570380 ATP6V0A2Q9Y487 856 aa14.02□□□□□ -0.17
CTDNEP1-202ENST00000570380 IBTKQ9P2D0 1353 aaPredicted RBP14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 RAD17O75943 681 aa14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 GPTP24298 496 aa14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 MCM10Q7L590 875 aa14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 CNOT7Q9UIV1 285 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-202ENST00000570380 MAP3K15Q6ZN16 1313 aa14□□□□□ -0.17
CTDNEP1-202ENST00000570380 PRKAR2BP31323 418 aa14□□□□□ -0.17
CTDNEP1-202ENST00000570380 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
CTDNEP1-202ENST00000570380 CTU1Q7Z7A3 348 aaKnown RBP14□□□□□ -0.17
CTDNEP1-202ENST00000570380 SUPT20HQ8NEM7 779 aa14□□□□□ -0.17
CTDNEP1-202ENST00000570380 CCDC102AQ96A19 550 aa14□□□□□ -0.17
CTDNEP1-202ENST00000570380 ANKRD36CQ5JPF3 1778 aa14□□□□□ -0.17
CTDNEP1-202ENST00000570380 YDJCA8MPS7 323 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 H7C1D1 291 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 PER1O15534 1290 aaPredicted RBP13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 NTSR2O95665 410 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 KIAA2012Q0VF49 1180 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 TNIP1Q15025 636 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
CTDNEP1-202ENST00000570380 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms