RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 ISCA1Q9BUE6 129 aa21.52■■□□□ 1.04
EDC3-216ENST00000569561 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
EDC3-216ENST00000569561 SPINK5Q9NQ38 1064 aaPredicted RBP21.52■■□□□ 1.04
EDC3-216ENST00000569561 SNED1Q8TER0 1413 aa21.52■■□□□ 1.04
EDC3-216ENST00000569561 GTF2E1P29083 439 aaPredicted RBP21.51■■□□□ 1.03
EDC3-216ENST00000569561 UTP14AQ9BVJ6 771 aaKnown RBP21.51■■□□□ 1.03
EDC3-216ENST00000569561 SBF1O95248 1867 aa21.51■■□□□ 1.03
EDC3-216ENST00000569561 LTBP3Q9NS15 1303 aa21.51■■□□□ 1.03
EDC3-216ENST00000569561 HOXA10P31260 410 aaPredicted RBP21.5■■□□□ 1.03
EDC3-216ENST00000569561 CCDC30Q5VVM6 783 aa21.5■■□□□ 1.03
EDC3-216ENST00000569561 RNF181Q9P0P0 153 aa21.5■■□□□ 1.03
EDC3-216ENST00000569561 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
EDC3-216ENST00000569561 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
EDC3-216ENST00000569561 LMNB1P20700 586 aa21.48■■□□□ 1.03
EDC3-216ENST00000569561 TRIM28Q13263 835 aaKnown RBP21.48■■□□□ 1.03
EDC3-216ENST00000569561 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
EDC3-216ENST00000569561 GPBP1L1Q9HC44 474 aaPredicted RBP21.48■■□□□ 1.03
EDC3-216ENST00000569561 ZNF219Q9P2Y4 722 aaPredicted RBP21.48■■□□□ 1.03
EDC3-216ENST00000569561 SYNE4Q8N205 404 aa21.47■■□□□ 1.03
EDC3-216ENST00000569561 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
EDC3-216ENST00000569561 ZC3H4Q9UPT8 1303 aaKnown RBP21.47■■□□□ 1.03
EDC3-216ENST00000569561 CCER2I3L3R5 266 aa21.46■■□□□ 1.03
EDC3-216ENST00000569561 ALDH1B1P30837 517 aa21.46■■□□□ 1.03
EDC3-216ENST00000569561 SOGA3Q5TF21 947 aa21.46■■□□□ 1.03
EDC3-216ENST00000569561 ZNF526Q8TF50 670 aaPredicted RBP21.46■■□□□ 1.03
EDC3-216ENST00000569561 KIF3CO14782 793 aa21.45■■□□□ 1.02
EDC3-216ENST00000569561 OLFM4Q6UX06 510 aa21.45■■□□□ 1.02
EDC3-216ENST00000569561 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
EDC3-216ENST00000569561 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
EDC3-216ENST00000569561 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
EDC3-216ENST00000569561 ATP5J2-PTCD1G3V325 749 aa21.44■■□□□ 1.02
EDC3-216ENST00000569561 VAMP4O75379 141 aa21.44■■□□□ 1.02
EDC3-216ENST00000569561 GOLGA2Q08379 1002 aa21.44■■□□□ 1.02
EDC3-216ENST00000569561 CCDC93Q567U6 631 aa21.44■■□□□ 1.02
EDC3-216ENST00000569561 TAOK3Q9H2K8 898 aa21.44■■□□□ 1.02
EDC3-216ENST00000569561 TRMT112Q9UI30 125 aaKnown RBP21.44■■□□□ 1.02
EDC3-216ENST00000569561 HCLS1P14317 486 aaPredicted RBP21.43■■□□□ 1.02
EDC3-216ENST00000569561 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
EDC3-216ENST00000569561 RIC3Q7Z5B4 369 aa21.43■■□□□ 1.02
EDC3-216ENST00000569561 SLC51AQ86UW1 340 aa21.43■■□□□ 1.02
EDC3-216ENST00000569561 NLRP3Q96P20 1036 aa21.43■■□□□ 1.02
EDC3-216ENST00000569561 EXOSC9Q06265 439 aaKnown RBP21.42■■□□□ 1.02
EDC3-216ENST00000569561 G2E3Q7L622 706 aa21.42■■□□□ 1.02
EDC3-216ENST00000569561 RPGRQ92834 1020 aaKnown RBP21.42■■□□□ 1.02
EDC3-216ENST00000569561 TCERG1O14776 1098 aaKnown RBP21.41■■□□□ 1.02
EDC3-216ENST00000569561 RBM17Q96I25 401 aaKnown RBP21.41■■□□□ 1.02
EDC3-216ENST00000569561 METTL22Q9BUU2 404 aaPredicted RBP21.41■■□□□ 1.02
EDC3-216ENST00000569561 LAMB2P55268 1798 aa21.41■■□□□ 1.02
EDC3-216ENST00000569561 TIAM2Q8IVF5 1701 aa21.41■■□□□ 1.02
EDC3-216ENST00000569561 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
EDC3-216ENST00000569561 ABCC4O15439 1325 aa21.4■■□□□ 1.02
EDC3-216ENST00000569561 FKBP4Q02790 459 aaKnown RBP eCLIP21.4■■□□□ 1.02
EDC3-216ENST00000569561 ZNF428Q96B54 188 aa21.4■■□□□ 1.02
EDC3-216ENST00000569561 FAM89AQ96GI7 184 aa21.4■■□□□ 1.02
EDC3-216ENST00000569561 STK31Q9BXU1 1019 aa21.4■■□□□ 1.02
EDC3-216ENST00000569561 MYH16Q9H6N6 1097 aa21.4■■□□□ 1.02
EDC3-216ENST00000569561 NMRK2Q9NPI5 230 aa21.4■■□□□ 1.02
EDC3-216ENST00000569561 KSR2Q6VAB6 950 aa21.39■■□□□ 1.01
EDC3-216ENST00000569561 MYD88Q99836 296 aa21.39■■□□□ 1.01
EDC3-216ENST00000569561 PI4KAP2A4QPH2 592 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
EDC3-216ENST00000569561 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 IGKV5-2P06315 115 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 CC2D2BQ6DHV5 1058 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 PI4KAP1Q8N8J0 262 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 CCDC191Q8NCU4 936 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 MAP3K2Q9Y2U5 619 aa21.38■■□□□ 1.01
EDC3-216ENST00000569561 GLTPD2A6NH11 291 aa21.37■■□□□ 1.01
EDC3-216ENST00000569561 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
EDC3-216ENST00000569561 ZBTB38Q8NAP3 1195 aaPredicted RBP21.37■■□□□ 1.01
EDC3-216ENST00000569561 PSMD1Q99460 953 aa21.37■■□□□ 1.01
EDC3-216ENST00000569561 DICER1Q9UPY3 1922 aaKnown RBP21.37■■□□□ 1.01
EDC3-216ENST00000569561 PPEF1O14829 653 aaPredicted RBP21.36■■□□□ 1.01
EDC3-216ENST00000569561 FLIIQ13045 1269 aa21.36■■□□□ 1.01
EDC3-216ENST00000569561 KDM2BQ8NHM5 1336 aa21.35■■□□□ 1.01
EDC3-216ENST00000569561 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
EDC3-216ENST00000569561 COL4A1P02462 1669 aa21.35■■□□□ 1.01
EDC3-216ENST00000569561 PCCAP05165 728 aaPredicted RBP21.35■■□□□ 1.01
EDC3-216ENST00000569561 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
EDC3-216ENST00000569561 IRS4O14654 1257 aaPredicted RBP21.34■■□□□ 1.01
EDC3-216ENST00000569561 GRAPQ13588 217 aa21.34■■□□□ 1.01
EDC3-216ENST00000569561 GRAPLQ8TC17 118 aaPredicted RBP21.34■■□□□ 1.01
EDC3-216ENST00000569561 CWC25Q9NXE8 425 aaPredicted RBP21.34■■□□□ 1.01
EDC3-216ENST00000569561 ATP6V0A2Q9Y487 856 aa21.34■■□□□ 1.01
EDC3-216ENST00000569561 COL4A5P29400 1685 aa21.34■■□□□ 1.01
EDC3-216ENST00000569561 GRIPAP1Q4V328 841 aa21.33■■□□□ 1.01
EDC3-216ENST00000569561 RTL5Q5HYW3 569 aaPredicted RBP21.33■■□□□ 1.01
EDC3-216ENST00000569561 POTECB2RU33 542 aa21.32■■□□□ 1
EDC3-216ENST00000569561 BBOX1O75936 387 aa21.32■■□□□ 1
EDC3-216ENST00000569561 CDHR2Q9BYE9 1310 aa21.31■■□□□ 1
EDC3-216ENST00000569561 NEURL1BA8MQ27 555 aa21.31■■□□□ 1
EDC3-216ENST00000569561 E9PSI1 815 aa21.31■■□□□ 1
EDC3-216ENST00000569561 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
EDC3-216ENST00000569561 SLFN5Q08AF3 891 aa21.31■■□□□ 1
EDC3-216ENST00000569561 DDX46Q7L014 1031 aaKnown RBP21.31■■□□□ 1
EDC3-216ENST00000569561 WDR90Q96KV7 1748 aa21.31■■□□□ 1
EDC3-216ENST00000569561 LRRC37AA6NMS7 1700 aa21.3■■□□□ 1
EDC3-216ENST00000569561 CWF19L2Q2TBE0 894 aaKnown RBP21.3■■□□□ 1
EDC3-216ENST00000569561 SP8Q8IXZ3 490 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms