RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 NLRP10Q86W26 655 aa23.49■■□□□ 1.35
SIN3A-212ENST00000568919 NMRK2Q9NPI5 230 aa23.49■■□□□ 1.35
SIN3A-212ENST00000568919 FER1L6Q2WGJ9 1857 aa23.49■■□□□ 1.35
SIN3A-212ENST00000568919 ARFGEF2Q9Y6D5 1785 aa23.48■■□□□ 1.35
SIN3A-212ENST00000568919 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
SIN3A-212ENST00000568919 TNRC6CQ9HCJ0 1690 aaKnown RBP23.48■■□□□ 1.35
SIN3A-212ENST00000568919 HOXA10P31260 410 aaPredicted RBP23.47■■□□□ 1.35
SIN3A-212ENST00000568919 FAM9BQ8IZU0 186 aa23.47■■□□□ 1.35
SIN3A-212ENST00000568919 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
SIN3A-212ENST00000568919 TAOK3Q9H2K8 898 aa23.47■■□□□ 1.35
SIN3A-212ENST00000568919 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
SIN3A-212ENST00000568919 LTBP3Q9NS15 1303 aa23.47■■□□□ 1.35
SIN3A-212ENST00000568919 RIC1Q4ADV7 1423 aa23.47■■□□□ 1.35
SIN3A-212ENST00000568919 CCDC93Q567U6 631 aa23.46■■□□□ 1.35
SIN3A-212ENST00000568919 OLFM4Q6UX06 510 aa23.46■■□□□ 1.35
SIN3A-212ENST00000568919 C3orf67Q6ZVT6 689 aa23.46■■□□□ 1.35
SIN3A-212ENST00000568919 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
SIN3A-212ENST00000568919 RPGRQ92834 1020 aaKnown RBP23.46■■□□□ 1.35
SIN3A-212ENST00000568919 NLRP3Q96P20 1036 aa23.46■■□□□ 1.35
SIN3A-212ENST00000568919 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
SIN3A-212ENST00000568919 ZC3H4Q9UPT8 1303 aaKnown RBP23.46■■□□□ 1.35
SIN3A-212ENST00000568919 IL16Q14005 1332 aa23.45■■□□□ 1.34
SIN3A-212ENST00000568919 SYNE4Q8N205 404 aa23.45■■□□□ 1.34
SIN3A-212ENST00000568919 RNF123Q5XPI4 1314 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 CCDC30Q5VVM6 783 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 RBM17Q96I25 401 aaKnown RBP23.44■■□□□ 1.34
SIN3A-212ENST00000568919 CRAMP1Q96RY5 1269 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 CHMP4AQ9BY43 222 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 RRAGCQ9HB90 399 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 TRMT112Q9UI30 125 aaKnown RBP23.44■■□□□ 1.34
SIN3A-212ENST00000568919 ANKRD36CQ5JPF3 1778 aa23.44■■□□□ 1.34
SIN3A-212ENST00000568919 GLTPD2A6NH11 291 aa23.43■■□□□ 1.34
SIN3A-212ENST00000568919 WDR63Q8IWG1 891 aa23.43■■□□□ 1.34
SIN3A-212ENST00000568919 RTKN2Q8IZC4 609 aa23.43■■□□□ 1.34
SIN3A-212ENST00000568919 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
SIN3A-212ENST00000568919 ZNF428Q96B54 188 aa23.42■■□□□ 1.34
SIN3A-212ENST00000568919 DICER1Q9UPY3 1922 aaKnown RBP23.41■■□□□ 1.34
SIN3A-212ENST00000568919 HCLS1P14317 486 aaPredicted RBP23.41■■□□□ 1.34
SIN3A-212ENST00000568919 FKBP4Q02790 459 aaKnown RBP eCLIP23.41■■□□□ 1.34
SIN3A-212ENST00000568919 RIC3Q7Z5B4 369 aa23.41■■□□□ 1.34
SIN3A-212ENST00000568919 SH3TC1Q8TE82 1336 aa23.4■■□□□ 1.34
SIN3A-212ENST00000568919 TOMM70O94826 608 aa23.4■■□□□ 1.34
SIN3A-212ENST00000568919 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
SIN3A-212ENST00000568919 TRIM28Q13263 835 aaKnown RBP23.4■■□□□ 1.34
SIN3A-212ENST00000568919 TWISTNBQ3B726 338 aaPredicted RBP23.39■■□□□ 1.33
SIN3A-212ENST00000568919 DPY19L2Q6NUT2 758 aa23.39■■□□□ 1.33
SIN3A-212ENST00000568919 CC2D2BQ6DHV5 1058 aa23.38■■□□□ 1.33
SIN3A-212ENST00000568919 FAM89AQ96GI7 184 aa23.38■■□□□ 1.33
SIN3A-212ENST00000568919 ZNF277Q9NRM2 450 aaPredicted RBP23.38■■□□□ 1.33
SIN3A-212ENST00000568919 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
SIN3A-212ENST00000568919 TIAM2Q8IVF5 1701 aa23.36■■□□□ 1.33
SIN3A-212ENST00000568919 FANCIQ9NVI1 1328 aa23.35■■□□□ 1.33
SIN3A-212ENST00000568919 PPEF1O14829 653 aaPredicted RBP23.35■■□□□ 1.33
SIN3A-212ENST00000568919 C16orf71Q8IYS4 520 aaPredicted RBP23.35■■□□□ 1.33
SIN3A-212ENST00000568919 PSMD1Q99460 953 aa23.35■■□□□ 1.33
SIN3A-212ENST00000568919 MYD88Q99836 296 aa23.35■■□□□ 1.33
SIN3A-212ENST00000568919 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
SIN3A-212ENST00000568919 ABCC4O15439 1325 aa23.34■■□□□ 1.33
SIN3A-212ENST00000568919 DDX58O95786 925 aaKnown RBP23.34■■□□□ 1.33
SIN3A-212ENST00000568919 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
SIN3A-212ENST00000568919 GRIPAP1Q4V328 841 aa23.34■■□□□ 1.33
SIN3A-212ENST00000568919 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
SIN3A-212ENST00000568919 METTL22Q9BUU2 404 aaPredicted RBP23.34■■□□□ 1.33
SIN3A-212ENST00000568919 SPINK5Q9NQ38 1064 aaPredicted RBP23.34■■□□□ 1.33
SIN3A-212ENST00000568919 SNED1Q8TER0 1413 aa23.33■■□□□ 1.33
SIN3A-212ENST00000568919 LAMB2P55268 1798 aa23.33■■□□□ 1.33
SIN3A-212ENST00000568919 POTECB2RU33 542 aa23.33■■□□□ 1.33
SIN3A-212ENST00000568919 BBOX1O75936 387 aa23.33■■□□□ 1.33
SIN3A-212ENST00000568919 SLC4A2P04920 1241 aa23.33■■□□□ 1.33
SIN3A-212ENST00000568919 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
SIN3A-212ENST00000568919 DDX46Q7L014 1031 aaKnown RBP23.33■■□□□ 1.33
SIN3A-212ENST00000568919 RBM46Q8TBY0 533 aaKnown RBP23.33■■□□□ 1.33
SIN3A-212ENST00000568919 ATP6V0A2Q9Y487 856 aa23.33■■□□□ 1.33
SIN3A-212ENST00000568919 VAMP4O75379 141 aa23.32■■□□□ 1.32
SIN3A-212ENST00000568919 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
SIN3A-212ENST00000568919 HSPA6P17066 643 aa23.32■■□□□ 1.32
SIN3A-212ENST00000568919 IARSP41252 1262 aaKnown RBP23.32■■□□□ 1.32
SIN3A-212ENST00000568919 EXOSC9Q06265 439 aaKnown RBP23.32■■□□□ 1.32
SIN3A-212ENST00000568919 KSR2Q6VAB6 950 aa23.32■■□□□ 1.32
SIN3A-212ENST00000568919 G2E3Q7L622 706 aa23.32■■□□□ 1.32
SIN3A-212ENST00000568919 MAP3K2Q9Y2U5 619 aa23.32■■□□□ 1.32
SIN3A-212ENST00000568919 PI4KAP2A4QPH2 592 aa23.31■■□□□ 1.32
SIN3A-212ENST00000568919 SF3B3Q15393 1217 aaKnown RBP23.31■■□□□ 1.32
SIN3A-212ENST00000568919 PI4KAP1Q8N8J0 262 aa23.31■■□□□ 1.32
SIN3A-212ENST00000568919 ZBTB38Q8NAP3 1195 aaPredicted RBP23.31■■□□□ 1.32
SIN3A-212ENST00000568919 CCDC191Q8NCU4 936 aa23.31■■□□□ 1.32
SIN3A-212ENST00000568919 IRS4O14654 1257 aaPredicted RBP23.3■■□□□ 1.32
SIN3A-212ENST00000568919 GRAPQ13588 217 aa23.3■■□□□ 1.32
SIN3A-212ENST00000568919 SP8Q8IXZ3 490 aa23.3■■□□□ 1.32
SIN3A-212ENST00000568919 GRAPLQ8TC17 118 aaPredicted RBP23.3■■□□□ 1.32
SIN3A-212ENST00000568919 TMX4Q9H1E5 349 aaPredicted RBP23.3■■□□□ 1.32
SIN3A-212ENST00000568919 CWC25Q9NXE8 425 aaPredicted RBP23.29■■□□□ 1.32
SIN3A-212ENST00000568919 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
SIN3A-212ENST00000568919 MYH16Q9H6N6 1097 aa23.28■■□□□ 1.32
SIN3A-212ENST00000568919 TAF1P21675 1872 aa23.28■■□□□ 1.32
SIN3A-212ENST00000568919 FZD9O00144 591 aa23.27■■□□□ 1.32
SIN3A-212ENST00000568919 PCCAP05165 728 aaPredicted RBP23.27■■□□□ 1.32
SIN3A-212ENST00000568919 FSTL1Q12841 308 aa23.27■■□□□ 1.32
SIN3A-212ENST00000568919 JARID2Q92833 1246 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms