RNA–Protein interactions for RNA: ENST00000568502.1

KLHDC4-224, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-224ENST00000568502 USP50Q70EL3 339 aaPredicted RBP16.77■□□□□ 0.28
KLHDC4-224ENST00000568502 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
KLHDC4-224ENST00000568502 NUP98P52948 1817 aa16.76■□□□□ 0.27
KLHDC4-224ENST00000568502 CELF2O95319 508 aaKnown RBP16.76■□□□□ 0.27
KLHDC4-224ENST00000568502 LARGE2Q8N3Y3 721 aa16.76■□□□□ 0.27
KLHDC4-224ENST00000568502 AKAP11Q9UKA4 1901 aa16.76■□□□□ 0.27
KLHDC4-224ENST00000568502 LAMB4A4D0S4 1761 aa16.75■□□□□ 0.27
KLHDC4-224ENST00000568502 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
KLHDC4-224ENST00000568502 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
KLHDC4-224ENST00000568502 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
KLHDC4-224ENST00000568502 SOX10P56693 466 aa16.74■□□□□ 0.27
KLHDC4-224ENST00000568502 CIAPIN1Q6FI81 312 aa16.74■□□□□ 0.27
KLHDC4-224ENST00000568502 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
KLHDC4-224ENST00000568502 ZNF408Q9H9D4 720 aa16.74■□□□□ 0.27
KLHDC4-224ENST00000568502 NPC1L1Q9UHC9 1359 aa16.74■□□□□ 0.27
KLHDC4-224ENST00000568502 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
KLHDC4-224ENST00000568502 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
KLHDC4-224ENST00000568502 ABCC12Q96J65 1359 aa16.73■□□□□ 0.27
KLHDC4-224ENST00000568502 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
KLHDC4-224ENST00000568502 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
KLHDC4-224ENST00000568502 HHIPL1Q96JK4 782 aa16.72■□□□□ 0.27
KLHDC4-224ENST00000568502 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
KLHDC4-224ENST00000568502 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
KLHDC4-224ENST00000568502 KCNQ3O43525 872 aa16.71■□□□□ 0.27
KLHDC4-224ENST00000568502 RPGRQ92834 1020 aaKnown RBP16.71■□□□□ 0.27
KLHDC4-224ENST00000568502 GLIS2Q9BZE0 524 aaPredicted RBP16.71■□□□□ 0.27
KLHDC4-224ENST00000568502 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
KLHDC4-224ENST00000568502 PRPF38BQ5VTL8 546 aaKnown RBP16.7■□□□□ 0.26
KLHDC4-224ENST00000568502 GPRC5DQ9NZD1 345 aa16.7■□□□□ 0.26
KLHDC4-224ENST00000568502 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
KLHDC4-224ENST00000568502 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
KLHDC4-224ENST00000568502 PPIP5K2O43314 1243 aa16.69■□□□□ 0.26
KLHDC4-224ENST00000568502 NOGQ13253 232 aa16.69■□□□□ 0.26
KLHDC4-224ENST00000568502 CRY2Q49AN0 593 aa16.69■□□□□ 0.26
KLHDC4-224ENST00000568502 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
KLHDC4-224ENST00000568502 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
KLHDC4-224ENST00000568502 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
KLHDC4-224ENST00000568502 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
KLHDC4-224ENST00000568502 RGL2O15211 777 aa16.68■□□□□ 0.26
KLHDC4-224ENST00000568502 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
KLHDC4-224ENST00000568502 POLR2AP24928 1970 aaKnown RBP16.68■□□□□ 0.26
KLHDC4-224ENST00000568502 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
KLHDC4-224ENST00000568502 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
KLHDC4-224ENST00000568502 GRIPAP1Q4V328 841 aa16.67■□□□□ 0.26
KLHDC4-224ENST00000568502 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
KLHDC4-224ENST00000568502 NYXQ9GZU5 481 aa16.67■□□□□ 0.26
KLHDC4-224ENST00000568502 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
KLHDC4-224ENST00000568502 HLFQ16534 295 aa16.66■□□□□ 0.26
KLHDC4-224ENST00000568502 AOC3Q16853 763 aa16.66■□□□□ 0.26
KLHDC4-224ENST00000568502 ZIC5Q96T25 663 aa16.66■□□□□ 0.26
KLHDC4-224ENST00000568502 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
KLHDC4-224ENST00000568502 GMPSP49915 693 aaPredicted RBP16.65■□□□□ 0.26
KLHDC4-224ENST00000568502 HUNKP57058 714 aa16.65■□□□□ 0.26
KLHDC4-224ENST00000568502 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
KLHDC4-224ENST00000568502 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
KLHDC4-224ENST00000568502 LAMB2P55268 1798 aa16.64■□□□□ 0.25
KLHDC4-224ENST00000568502 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
KLHDC4-224ENST00000568502 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
KLHDC4-224ENST00000568502 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
KLHDC4-224ENST00000568502 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
KLHDC4-224ENST00000568502 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-224ENST00000568502 CXCL9Q07325 125 aa16.63■□□□□ 0.25
KLHDC4-224ENST00000568502 CDC37L1Q7L3B6 337 aa16.63■□□□□ 0.25
KLHDC4-224ENST00000568502 RBM17Q96I25 401 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-224ENST00000568502 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
KLHDC4-224ENST00000568502 SAGE1Q9NXZ1 904 aa16.62■□□□□ 0.25
KLHDC4-224ENST00000568502 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
KLHDC4-224ENST00000568502 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-224ENST00000568502 TRPM4Q8TD43 1214 aa16.61■□□□□ 0.25
KLHDC4-224ENST00000568502 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
KLHDC4-224ENST00000568502 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
KLHDC4-224ENST00000568502 PGAP2Q9UHJ9 254 aa16.61■□□□□ 0.25
KLHDC4-224ENST00000568502 GPTP24298 496 aa16.6■□□□□ 0.25
KLHDC4-224ENST00000568502 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
KLHDC4-224ENST00000568502 ANKRD36CQ5JPF3 1778 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 TRPA1O75762 1119 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 RGMBQ6NW40 437 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 SUPT20HQ8NEM7 779 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
KLHDC4-224ENST00000568502 RAD17O75943 681 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 MCM10Q7L590 875 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 VPS33BQ9H267 617 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 MAP3K15Q6ZN16 1313 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 DDX60Q8IY21 1712 aaKnown RBP16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 TAF1P21675 1872 aa16.58■□□□□ 0.24
KLHDC4-224ENST00000568502 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 TNIP1Q15025 636 aa16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 C3orf67Q6ZVT6 689 aa16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 GBA2Q9HCG7 927 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 RNF186Q9NXI6 227 aa16.57■□□□□ 0.24
KLHDC4-224ENST00000568502 NUDCQ9Y266 331 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms