RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 HOXA10P31260 410 aaPredicted RBP19.67■□□□□ 0.74
SCAMP2-209ENST00000567638 KRT24Q2M2I5 525 aa19.67■□□□□ 0.74
SCAMP2-209ENST00000567638 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
SCAMP2-209ENST00000567638 RPGRQ92834 1020 aaKnown RBP19.67■□□□□ 0.74
SCAMP2-209ENST00000567638 ZNF277Q9NRM2 450 aaPredicted RBP19.67■□□□□ 0.74
SCAMP2-209ENST00000567638 HTRA3P83110 453 aa19.66■□□□□ 0.74
SCAMP2-209ENST00000567638 COPS6Q7L5N1 327 aa19.66■□□□□ 0.74
SCAMP2-209ENST00000567638 DDX21Q9NR30 783 aaKnown RBP eCLIP19.66■□□□□ 0.74
SCAMP2-209ENST00000567638 XAGE3Q8WTP9 111 aa19.65■□□□□ 0.74
SCAMP2-209ENST00000567638 HOXB7P09629 217 aa19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 IARSP41252 1262 aaKnown RBP19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 AIMP1Q12904 312 aaKnown RBP19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 HSP90AB3PQ58FF7 597 aa19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 CC2D2BQ6DHV5 1058 aa19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 PSMD1Q99460 953 aa19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 UTP14AQ9BVJ6 771 aaKnown RBP19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 DDX60Q8IY21 1712 aaKnown RBP19.64■□□□□ 0.73
SCAMP2-209ENST00000567638 ZNF541Q9H0D2 1346 aa19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 C3orf67Q6ZVT6 689 aa19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 SYNE4Q8N205 404 aa19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 RBM17Q96I25 401 aaKnown RBP19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 L3MBTL3Q96JM7 780 aaPredicted RBP19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 CRAMP1Q96RY5 1269 aa19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 CHPF2Q9P2E5 772 aa19.63■□□□□ 0.73
SCAMP2-209ENST00000567638 SLC10A5Q5PT55 438 aa19.62■□□□□ 0.73
SCAMP2-209ENST00000567638 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
SCAMP2-209ENST00000567638 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
SCAMP2-209ENST00000567638 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
SCAMP2-209ENST00000567638 TAF1P21675 1872 aa19.62■□□□□ 0.73
SCAMP2-209ENST00000567638 COL4A5P29400 1685 aa19.62■□□□□ 0.73
SCAMP2-209ENST00000567638 IQCA1LA6NCM1 817 aa19.61■□□□□ 0.73
SCAMP2-209ENST00000567638 PPEF1O14829 653 aaPredicted RBP19.61■□□□□ 0.73
SCAMP2-209ENST00000567638 NLRP10Q86W26 655 aa19.61■□□□□ 0.73
SCAMP2-209ENST00000567638 ADAMTSL1Q8N6G6 1762 aa19.61■□□□□ 0.73
SCAMP2-209ENST00000567638 APAF1O14727 1248 aa19.6■□□□□ 0.73
SCAMP2-209ENST00000567638 TCIRG1Q13488 830 aa19.6■□□□□ 0.73
SCAMP2-209ENST00000567638 GRIPAP1Q4V328 841 aa19.6■□□□□ 0.73
SCAMP2-209ENST00000567638 MBIPQ9NS73 344 aa19.6■□□□□ 0.73
SCAMP2-209ENST00000567638 FZD9O00144 591 aa19.59■□□□□ 0.73
SCAMP2-209ENST00000567638 CHADLQ6NUI6 762 aa19.59■□□□□ 0.73
SCAMP2-209ENST00000567638 DBF4Q9UBU7 674 aaPredicted RBP19.59■□□□□ 0.73
SCAMP2-209ENST00000567638 ZNF853P0CG23 659 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 POTEIP0CG38 1075 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 POTEJP0CG39 1038 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 DUSP27Q5VZP5 1158 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 SLC51AQ86UW1 340 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 JMYQ8N9B5 988 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 LRRC37AA6NMS7 1700 aa19.58■□□□□ 0.72
SCAMP2-209ENST00000567638 ABCC4O15439 1325 aa19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 SH3TC1Q8TE82 1336 aa19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 JDP2Q8WYK2 163 aa19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 TAF1DQ9H5J8 278 aaPredicted RBP19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 TRMT112Q9UI30 125 aaKnown RBP19.57■□□□□ 0.72
SCAMP2-209ENST00000567638 GNAI1P63096 354 aa19.56■□□□□ 0.72
SCAMP2-209ENST00000567638 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
SCAMP2-209ENST00000567638 HYPKQ9NX55 129 aa19.56■□□□□ 0.72
SCAMP2-209ENST00000567638 LTBP1Q14766 1721 aa19.56■□□□□ 0.72
SCAMP2-209ENST00000567638 HCLS1P14317 486 aaPredicted RBP19.55■□□□□ 0.72
SCAMP2-209ENST00000567638 ANKRD13DQ6ZTN6 518 aa19.55■□□□□ 0.72
SCAMP2-209ENST00000567638 LDHDQ86WU2 507 aa19.55■□□□□ 0.72
SCAMP2-209ENST00000567638 GPC2Q8N158 579 aa19.55■□□□□ 0.72
SCAMP2-209ENST00000567638 HACL1Q9UJ83 578 aa19.55■□□□□ 0.72
SCAMP2-209ENST00000567638 ATP6V0A2Q9Y487 856 aa19.55■□□□□ 0.72
SCAMP2-209ENST00000567638 LARGE2Q8N3Y3 721 aa19.54■□□□□ 0.72
SCAMP2-209ENST00000567638 TMX4Q9H1E5 349 aaPredicted RBP19.54■□□□□ 0.72
SCAMP2-209ENST00000567638 EIF6P56537 245 aaKnown RBP19.53■□□□□ 0.72
SCAMP2-209ENST00000567638 ISCA1Q9BUE6 129 aa19.53■□□□□ 0.72
SCAMP2-209ENST00000567638 BBOX1O75936 387 aa19.52■□□□□ 0.72
SCAMP2-209ENST00000567638 EPHX2P34913 555 aa19.52■□□□□ 0.72
SCAMP2-209ENST00000567638 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.72
SCAMP2-209ENST00000567638 CCDC184Q52MB2 194 aa19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 EAPPQ56P03 285 aaPredicted RBP19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 IFFO2Q5TF58 517 aa19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 SP8Q8IXZ3 490 aa19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 ZNF428Q96B54 188 aa19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 DUOX1Q9NRD9 1551 aa19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
SCAMP2-209ENST00000567638 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 ELL2O00472 640 aaPredicted RBP19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 PPIP5K2O43314 1243 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 GRAPQ13588 217 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 PNMA8AQ86V59 439 aaPredicted RBP19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 NIM1KQ8IY84 436 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 SUPT20HQ8NEM7 779 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 RTFDC1Q9BY42 306 aaPredicted RBP19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 VPS33BQ9H267 617 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 CREBZFQ9NS37 354 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 GJA3Q9Y6H8 435 aa19.5■□□□□ 0.71
SCAMP2-209ENST00000567638 AOC3Q16853 763 aa19.49■□□□□ 0.71
SCAMP2-209ENST00000567638 FAM89AQ96GI7 184 aa19.49■□□□□ 0.71
SCAMP2-209ENST00000567638 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
SCAMP2-209ENST00000567638 COL4A1P02462 1669 aa19.49■□□□□ 0.71
SCAMP2-209ENST00000567638 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms