RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 FANCIQ9NVI1 1328 aa27.88■■■□□ 2.05
SPG7-214ENST00000566371 FER1L6Q2WGJ9 1857 aa27.87■■■□□ 2.05
SPG7-214ENST00000566371 ALDH1B1P30837 517 aa27.87■■■□□ 2.05
SPG7-214ENST00000566371 GPBP1L1Q9HC44 474 aaPredicted RBP27.87■■■□□ 2.05
SPG7-214ENST00000566371 RNF181Q9P0P0 153 aa27.87■■■□□ 2.05
SPG7-214ENST00000566371 LMNB1P20700 586 aa27.86■■■□□ 2.05
SPG7-214ENST00000566371 RASSF7Q02833 373 aa27.86■■■□□ 2.05
SPG7-214ENST00000566371 SLC10A5Q5PT55 438 aa27.86■■■□□ 2.05
SPG7-214ENST00000566371 NFKBIEO00221 500 aa27.85■■■□□ 2.05
SPG7-214ENST00000566371 GOLGA2Q08379 1002 aa27.85■■■□□ 2.05
SPG7-214ENST00000566371 TWISTNBQ3B726 338 aaPredicted RBP27.85■■■□□ 2.05
SPG7-214ENST00000566371 CCER2I3L3R5 266 aa27.84■■■□□ 2.05
SPG7-214ENST00000566371 HOXA10P31260 410 aaPredicted RBP27.84■■■□□ 2.05
SPG7-214ENST00000566371 C7orf43Q8WVR3 580 aa27.84■■■□□ 2.05
SPG7-214ENST00000566371 PHAXQ9H814 394 aaKnown RBP27.84■■■□□ 2.05
SPG7-214ENST00000566371 LTBP3Q9NS15 1303 aa27.84■■■□□ 2.05
SPG7-214ENST00000566371 ZC3H4Q9UPT8 1303 aaKnown RBP27.84■■■□□ 2.05
SPG7-214ENST00000566371 RPGRQ92834 1020 aaKnown RBP27.83■■■□□ 2.05
SPG7-214ENST00000566371 ISCA1Q9BUE6 129 aa27.83■■■□□ 2.05
SPG7-214ENST00000566371 ZNF219Q9P2Y4 722 aaPredicted RBP27.83■■■□□ 2.05
SPG7-214ENST00000566371 ZNF526Q8TF50 670 aaPredicted RBP27.82■■■□□ 2.04
SPG7-214ENST00000566371 STK31Q9BXU1 1019 aa27.82■■■□□ 2.04
SPG7-214ENST00000566371 TRMT112Q9UI30 125 aaKnown RBP27.82■■■□□ 2.04
SPG7-214ENST00000566371 PRELPP51888 382 aa27.81■■■□□ 2.04
SPG7-214ENST00000566371 TRIM28Q13263 835 aaKnown RBP27.81■■■□□ 2.04
SPG7-214ENST00000566371 RIC3Q7Z5B4 369 aa27.81■■■□□ 2.04
SPG7-214ENST00000566371 NLRP3Q96P20 1036 aa27.81■■■□□ 2.04
SPG7-214ENST00000566371 MYH16Q9H6N6 1097 aa27.81■■■□□ 2.04
SPG7-214ENST00000566371 SH3TC1Q8TE82 1336 aa27.81■■■□□ 2.04
SPG7-214ENST00000566371 DDX58O95786 925 aaKnown RBP27.8■■■□□ 2.04
SPG7-214ENST00000566371 TAOK3Q9H2K8 898 aa27.8■■■□□ 2.04
SPG7-214ENST00000566371 TIAM2Q8IVF5 1701 aa27.79■■■□□ 2.04
SPG7-214ENST00000566371 ZNF521Q96K83 1311 aa27.79■■■□□ 2.04
SPG7-214ENST00000566371 CCDC93Q567U6 631 aa27.79■■■□□ 2.04
SPG7-214ENST00000566371 RBM17Q96I25 401 aaKnown RBP27.79■■■□□ 2.04
SPG7-214ENST00000566371 CRAMP1Q96RY5 1269 aa27.79■■■□□ 2.04
SPG7-214ENST00000566371 CCDC88AQ3V6T2 1871 aa27.78■■■□□ 2.04
SPG7-214ENST00000566371 C3orf67Q6ZVT6 689 aa27.78■■■□□ 2.04
SPG7-214ENST00000566371 SPINK5Q9NQ38 1064 aaPredicted RBP27.78■■■□□ 2.04
SPG7-214ENST00000566371 ATP5J2-PTCD1G3V325 749 aa27.77■■■□□ 2.04
SPG7-214ENST00000566371 LAMB2P55268 1798 aa27.77■■■□□ 2.04
SPG7-214ENST00000566371 RTKN2Q8IZC4 609 aa27.76■■■□□ 2.03
SPG7-214ENST00000566371 DICER1Q9UPY3 1922 aaKnown RBP27.76■■■□□ 2.03
SPG7-214ENST00000566371 EXOSC9Q06265 439 aaKnown RBP27.75■■■□□ 2.03
SPG7-214ENST00000566371 SYNE4Q8N205 404 aa27.75■■■□□ 2.03
SPG7-214ENST00000566371 DDX60Q8IY21 1712 aaKnown RBP27.75■■■□□ 2.03
SPG7-214ENST00000566371 CACNA1FO60840 1977 aa27.75■■■□□ 2.03
SPG7-214ENST00000566371 KDM2BQ8NHM5 1336 aa27.74■■■□□ 2.03
SPG7-214ENST00000566371 VAMP4O75379 141 aa27.74■■■□□ 2.03
SPG7-214ENST00000566371 HCLS1P14317 486 aaPredicted RBP27.74■■■□□ 2.03
SPG7-214ENST00000566371 C1QTNF8P60827 252 aa27.74■■■□□ 2.03
SPG7-214ENST00000566371 CC2D2BQ6DHV5 1058 aa27.74■■■□□ 2.03
SPG7-214ENST00000566371 METTL22Q9BUU2 404 aaPredicted RBP27.74■■■□□ 2.03
SPG7-214ENST00000566371 SLC4A2P04920 1241 aa27.73■■■□□ 2.03
SPG7-214ENST00000566371 KSR2Q6VAB6 950 aa27.73■■■□□ 2.03
SPG7-214ENST00000566371 SNED1Q8TER0 1413 aa27.73■■■□□ 2.03
SPG7-214ENST00000566371 TCERG1O14776 1098 aaKnown RBP27.72■■■□□ 2.03
SPG7-214ENST00000566371 FKBP4Q02790 459 aaKnown RBP eCLIP27.72■■■□□ 2.03
SPG7-214ENST00000566371 GRIPAP1Q4V328 841 aa27.72■■■□□ 2.03
SPG7-214ENST00000566371 CCDC191Q8NCU4 936 aa27.72■■■□□ 2.03
SPG7-214ENST00000566371 FAM89AQ96GI7 184 aa27.72■■■□□ 2.03
SPG7-214ENST00000566371 MYD88Q99836 296 aa27.72■■■□□ 2.03
SPG7-214ENST00000566371 MAP3K2Q9Y2U5 619 aa27.72■■■□□ 2.03
SPG7-214ENST00000566371 OLFM4Q6UX06 510 aa27.71■■■□□ 2.03
SPG7-214ENST00000566371 PI4KAP2A4QPH2 592 aa27.7■■■□□ 2.02
SPG7-214ENST00000566371 KIF3CO14782 793 aa27.7■■■□□ 2.02
SPG7-214ENST00000566371 PPEF1O14829 653 aaPredicted RBP27.7■■■□□ 2.02
SPG7-214ENST00000566371 PI4KAP1Q8N8J0 262 aa27.7■■■□□ 2.02
SPG7-214ENST00000566371 ZBTB38Q8NAP3 1195 aaPredicted RBP27.7■■■□□ 2.02
SPG7-214ENST00000566371 ABCC4O15439 1325 aa27.69■■■□□ 2.02
SPG7-214ENST00000566371 ZNF428Q96B54 188 aa27.69■■■□□ 2.02
SPG7-214ENST00000566371 PSMD1Q99460 953 aa27.69■■■□□ 2.02
SPG7-214ENST00000566371 HSP90B1P14625 803 aaKnown RBP27.68■■■□□ 2.02
SPG7-214ENST00000566371 DDX46Q7L014 1031 aaKnown RBP27.68■■■□□ 2.02
SPG7-214ENST00000566371 G2E3Q7L622 706 aa27.68■■■□□ 2.02
SPG7-214ENST00000566371 NMRK2Q9NPI5 230 aa27.68■■■□□ 2.02
SPG7-214ENST00000566371 CWC25Q9NXE8 425 aaPredicted RBP27.68■■■□□ 2.02
SPG7-214ENST00000566371 GLTPD2A6NH11 291 aa27.67■■■□□ 2.02
SPG7-214ENST00000566371 BBOX1O75936 387 aa27.67■■■□□ 2.02
SPG7-214ENST00000566371 FLIIQ13045 1269 aa27.67■■■□□ 2.02
SPG7-214ENST00000566371 IRS4O14654 1257 aaPredicted RBP27.66■■■□□ 2.02
SPG7-214ENST00000566371 NEXNQ0ZGT2 675 aa27.66■■■□□ 2.02
SPG7-214ENST00000566371 SF3B3Q15393 1217 aaKnown RBP27.66■■■□□ 2.02
SPG7-214ENST00000566371 ATP6V0A2Q9Y487 856 aa27.66■■■□□ 2.02
SPG7-214ENST00000566371 E9PSI1 815 aa27.65■■■□□ 2.02
SPG7-214ENST00000566371 PCCAP05165 728 aaPredicted RBP27.65■■■□□ 2.02
SPG7-214ENST00000566371 DIEXFQ68CQ4 756 aaKnown RBP27.65■■■□□ 2.02
SPG7-214ENST00000566371 TMX4Q9H1E5 349 aaPredicted RBP27.65■■■□□ 2.02
SPG7-214ENST00000566371 ZNF277Q9NRM2 450 aaPredicted RBP27.65■■■□□ 2.02
SPG7-214ENST00000566371 GRAPQ13588 217 aa27.64■■■□□ 2.02
SPG7-214ENST00000566371 RTL5Q5HYW3 569 aaPredicted RBP27.64■■■□□ 2.02
SPG7-214ENST00000566371 GRAPLQ8TC17 118 aaPredicted RBP27.64■■■□□ 2.02
SPG7-214ENST00000566371 IGKV5-2P06315 115 aa27.63■■■□□ 2.01
SPG7-214ENST00000566371 FKBP5Q13451 457 aaPredicted RBP27.63■■■□□ 2.01
SPG7-214ENST00000566371 DPY19L2Q6NUT2 758 aa27.63■■■□□ 2.01
SPG7-214ENST00000566371 TMC4Q7Z404 712 aa27.63■■■□□ 2.01
SPG7-214ENST00000566371 IARSP41252 1262 aaKnown RBP27.62■■■□□ 2.01
SPG7-214ENST00000566371 SP8Q8IXZ3 490 aa27.61■■■□□ 2.01
SPG7-214ENST00000566371 CDHR2Q9BYE9 1310 aa27.61■■■□□ 2.01
SPG7-214ENST00000566371 WDR90Q96KV7 1748 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms