RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TMEM57Q8N5G2 664 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 CCDC191Q8NCU4 936 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 UBN2Q6ZU65 1347 aa18.7■□□□□ 0.58
SPG7-213ENST00000566221 C1QTNF8P60827 252 aa18.69■□□□□ 0.58
SPG7-213ENST00000566221 CWF19L2Q2TBE0 894 aaKnown RBP18.69■□□□□ 0.58
SPG7-213ENST00000566221 ITPRIPQ8IWB1 547 aa18.69■□□□□ 0.58
SPG7-213ENST00000566221 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
SPG7-213ENST00000566221 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
SPG7-213ENST00000566221 NLRP10Q86W26 655 aa18.68■□□□□ 0.58
SPG7-213ENST00000566221 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
SPG7-213ENST00000566221 PDGFDQ9GZP0 370 aaPredicted RBP18.68■□□□□ 0.58
SPG7-213ENST00000566221 GCKRQ14397 625 aa18.67■□□□□ 0.58
SPG7-213ENST00000566221 NFIXQ14938 502 aa18.67■□□□□ 0.58
SPG7-213ENST00000566221 BICDL1Q6ZP65 573 aa18.67■□□□□ 0.58
SPG7-213ENST00000566221 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
SPG7-213ENST00000566221 PPP1R42Q7Z4L9 355 aa18.66■□□□□ 0.58
SPG7-213ENST00000566221 DDX19BQ9UMR2 479 aa18.66■□□□□ 0.58
SPG7-213ENST00000566221 COG6Q9Y2V7 657 aa18.66■□□□□ 0.58
SPG7-213ENST00000566221 NEFLP07196 543 aa18.65■□□□□ 0.58
SPG7-213ENST00000566221 TM4SF1P30408 202 aa18.65■□□□□ 0.58
SPG7-213ENST00000566221 NYXQ9GZU5 481 aa18.65■□□□□ 0.58
SPG7-213ENST00000566221 MTFR1LQ9H019 292 aa18.65■□□□□ 0.58
SPG7-213ENST00000566221 ANKRD31Q8N7Z5 1873 aa18.65■□□□□ 0.58
SPG7-213ENST00000566221 GRM8O00222 908 aa18.64■□□□□ 0.57
SPG7-213ENST00000566221 UTP14AQ9BVJ6 771 aaKnown RBP18.64■□□□□ 0.57
SPG7-213ENST00000566221 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
SPG7-213ENST00000566221 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
SPG7-213ENST00000566221 KIF13BQ9NQT8 1826 aa18.64■□□□□ 0.57
SPG7-213ENST00000566221 POLRMTO00411 1230 aaKnown RBP18.63■□□□□ 0.57
SPG7-213ENST00000566221 NTSR2O95665 410 aa18.63■□□□□ 0.57
SPG7-213ENST00000566221 PCCAP05165 728 aaPredicted RBP18.63■□□□□ 0.57
SPG7-213ENST00000566221 MMP10P09238 476 aa18.63■□□□□ 0.57
SPG7-213ENST00000566221 DDR1Q08345 913 aa18.63■□□□□ 0.57
SPG7-213ENST00000566221 SUSD4Q5VX71 490 aa18.63■□□□□ 0.57
SPG7-213ENST00000566221 NBPF5PQ86XG9 351 aaPredicted RBP18.63■□□□□ 0.57
SPG7-213ENST00000566221 ZBTB38Q8NAP3 1195 aaPredicted RBP18.63■□□□□ 0.57
SPG7-213ENST00000566221 TRMT112Q9UI30 125 aaKnown RBP18.63■□□□□ 0.57
SPG7-213ENST00000566221 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
SPG7-213ENST00000566221 UTYO14607 1347 aa18.63■□□□□ 0.57
SPG7-213ENST00000566221 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
SPG7-213ENST00000566221 ZBTB7AO95365 584 aa18.62■□□□□ 0.57
SPG7-213ENST00000566221 GNAI3P08754 354 aa18.62■□□□□ 0.57
SPG7-213ENST00000566221 CRBNQ96SW2 442 aa18.62■□□□□ 0.57
SPG7-213ENST00000566221 USP44Q9H0E7 712 aa18.62■□□□□ 0.57
SPG7-213ENST00000566221 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
SPG7-213ENST00000566221 RIC1Q4ADV7 1423 aa18.62■□□□□ 0.57
SPG7-213ENST00000566221 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 FAM177BA6PVY3 158 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 H7C1W4 665 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 NPHP1O15259 732 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 SERPINB2P05120 415 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
SPG7-213ENST00000566221 TPTE2Q6XPS3 522 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 MEIS3Q99687 375 aa18.61■□□□□ 0.57
SPG7-213ENST00000566221 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
SPG7-213ENST00000566221 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
SPG7-213ENST00000566221 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
SPG7-213ENST00000566221 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
SPG7-213ENST00000566221 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
SPG7-213ENST00000566221 POLD1P28340 1107 aa18.59■□□□□ 0.57
SPG7-213ENST00000566221 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
SPG7-213ENST00000566221 CASP7P55210 303 aa18.59■□□□□ 0.57
SPG7-213ENST00000566221 FAM89AQ96GI7 184 aa18.59■□□□□ 0.57
SPG7-213ENST00000566221 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.57
SPG7-213ENST00000566221 ABCC12Q96J65 1359 aa18.58■□□□□ 0.57
SPG7-213ENST00000566221 COL11A2P13942 1736 aaPredicted RBP18.58■□□□□ 0.57
SPG7-213ENST00000566221 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.56
SPG7-213ENST00000566221 ST5P78524 1137 aa18.58■□□□□ 0.56
SPG7-213ENST00000566221 PRR5LQ6MZQ0 368 aa18.58■□□□□ 0.56
SPG7-213ENST00000566221 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
SPG7-213ENST00000566221 AAMPQ13685 434 aa18.57■□□□□ 0.56
SPG7-213ENST00000566221 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
SPG7-213ENST00000566221 RTL5Q5HYW3 569 aaPredicted RBP18.57■□□□□ 0.56
SPG7-213ENST00000566221 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
SPG7-213ENST00000566221 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
SPG7-213ENST00000566221 ATF5Q9Y2D1 282 aaPredicted RBP18.57■□□□□ 0.56
SPG7-213ENST00000566221 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
SPG7-213ENST00000566221 SPEF2Q9C093 1822 aa18.56■□□□□ 0.56
SPG7-213ENST00000566221 GNAI2P04899 355 aa18.56■□□□□ 0.56
SPG7-213ENST00000566221 EXOC6Q8TAG9 804 aa18.56■□□□□ 0.56
SPG7-213ENST00000566221 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
SPG7-213ENST00000566221 CACNA1SQ13698 1873 aa18.55■□□□□ 0.56
SPG7-213ENST00000566221 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
SPG7-213ENST00000566221 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
SPG7-213ENST00000566221 SGIP1Q9BQI5 828 aa18.55■□□□□ 0.56
SPG7-213ENST00000566221 PLA2G12BQ9BX93 195 aa18.55■□□□□ 0.56
SPG7-213ENST00000566221 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
SPG7-213ENST00000566221 PDE8AO60658 829 aa18.54■□□□□ 0.56
SPG7-213ENST00000566221 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
SPG7-213ENST00000566221 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
SPG7-213ENST00000566221 LRRFIP2Q9Y608 721 aaKnown RBP18.54■□□□□ 0.56
SPG7-213ENST00000566221 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
SPG7-213ENST00000566221 TAF1P21675 1872 aa18.52■□□□□ 0.56
SPG7-213ENST00000566221 PTGER2P43116 358 aa18.52■□□□□ 0.56
SPG7-213ENST00000566221 CTSWP56202 376 aa18.52■□□□□ 0.56
SPG7-213ENST00000566221 SYT17Q9BSW7 474 aa18.52■□□□□ 0.56
SPG7-213ENST00000566221 FHDC1Q9C0D6 1143 aaPredicted RBP18.52■□□□□ 0.56
SPG7-213ENST00000566221 BICC1Q9H694 974 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms