RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
RNF40-208ENST00000565995 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
RNF40-208ENST00000565995 HSPA8P11142 646 aaKnown RBP17.03■□□□□ 0.32
RNF40-208ENST00000565995 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
RNF40-208ENST00000565995 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.32
RNF40-208ENST00000565995 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
RNF40-208ENST00000565995 GTF2E1P29083 439 aaPredicted RBP17.01■□□□□ 0.31
RNF40-208ENST00000565995 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
RNF40-208ENST00000565995 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
RNF40-208ENST00000565995 TAF1P21675 1872 aa17.01■□□□□ 0.31
RNF40-208ENST00000565995 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
RNF40-208ENST00000565995 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
RNF40-208ENST00000565995 FAM177BA6PVY3 158 aa17■□□□□ 0.31
RNF40-208ENST00000565995 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
RNF40-208ENST00000565995 SCNN1DP51172 638 aa17■□□□□ 0.31
RNF40-208ENST00000565995 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
RNF40-208ENST00000565995 USP50Q70EL3 339 aaPredicted RBP17■□□□□ 0.31
RNF40-208ENST00000565995 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
RNF40-208ENST00000565995 VPS33BQ9H267 617 aa17■□□□□ 0.31
RNF40-208ENST00000565995 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
RNF40-208ENST00000565995 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
RNF40-208ENST00000565995 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
RNF40-208ENST00000565995 CST9Q5W186 159 aa16.98■□□□□ 0.31
RNF40-208ENST00000565995 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
RNF40-208ENST00000565995 ZNF34Q8IZ26 560 aa16.98■□□□□ 0.31
RNF40-208ENST00000565995 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
RNF40-208ENST00000565995 LMOD1P29536 600 aaPredicted RBP16.97■□□□□ 0.31
RNF40-208ENST00000565995 EPS15P42566 896 aa16.97■□□□□ 0.31
RNF40-208ENST00000565995 ECE1P42892 770 aa16.97■□□□□ 0.31
RNF40-208ENST00000565995 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
RNF40-208ENST00000565995 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
RNF40-208ENST00000565995 ABT1Q9ULW3 272 aaKnown RBP16.97■□□□□ 0.31
RNF40-208ENST00000565995 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.31
RNF40-208ENST00000565995 RGS19P49795 217 aa16.96■□□□□ 0.31
RNF40-208ENST00000565995 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
RNF40-208ENST00000565995 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
RNF40-208ENST00000565995 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
RNF40-208ENST00000565995 RBM17Q96I25 401 aaKnown RBP16.96■□□□□ 0.31
RNF40-208ENST00000565995 CAPNS2Q96L46 248 aa16.96■□□□□ 0.31
RNF40-208ENST00000565995 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.31
RNF40-208ENST00000565995 NTSR2O95665 410 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 MAP2K2P36507 400 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 SLC10A5Q5PT55 438 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 SUSD4Q5VX71 490 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 TLL2Q9Y6L7 1015 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 AKAP11Q9UKA4 1901 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
RNF40-208ENST00000565995 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
RNF40-208ENST00000565995 SLC34A2O95436 690 aa16.94■□□□□ 0.3
RNF40-208ENST00000565995 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■■■□ 23.2
RNF40-208ENST00000565995 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
RNF40-208ENST00000565995 KIF6Q6ZMV9 814 aa16.94■□□□□ 0.3
RNF40-208ENST00000565995 HHIPL1Q96JK4 782 aa16.94■□□□□ 0.3
RNF40-208ENST00000565995 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
RNF40-208ENST00000565995 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
RNF40-208ENST00000565995 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
RNF40-208ENST00000565995 ADARB2Q9NS39 739 aaKnown RBP16.93■□□□□ 0.3
RNF40-208ENST00000565995 GPRC5DQ9NZD1 345 aa16.93■□□□□ 0.3
RNF40-208ENST00000565995 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
RNF40-208ENST00000565995 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
RNF40-208ENST00000565995 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
RNF40-208ENST00000565995 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
RNF40-208ENST00000565995 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
RNF40-208ENST00000565995 PLEKHF1Q96S99 279 aa16.92■□□□□ 0.3
RNF40-208ENST00000565995 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
RNF40-208ENST00000565995 GPTP24298 496 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 CYP4F22Q6NT55 531 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 C3orf67Q6ZVT6 689 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 LRP10Q7Z4F1 713 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
RNF40-208ENST00000565995 TRAF5O00463 557 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 CXCL9Q07325 125 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 SAPCD2Q86UD0 394 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 ZC3H15Q8WU90 426 aaKnown RBP16.9■□□□□ 0.3
RNF40-208ENST00000565995 ZBTB3Q9H5J0 574 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 ZNRF3Q9ULT6 936 aa16.9■□□□□ 0.3
RNF40-208ENST00000565995 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
RNF40-208ENST00000565995 CA12O43570 354 aa16.89■□□□□ 0.29
RNF40-208ENST00000565995 BBOX1O75936 387 aa16.89■□□□□ 0.29
RNF40-208ENST00000565995 MYL6BP14649 208 aa16.89■□□□□ 0.29
RNF40-208ENST00000565995 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
RNF40-208ENST00000565995 SP8Q8IXZ3 490 aa16.89■□□□□ 0.29
RNF40-208ENST00000565995 PDIA6Q15084 440 aa16.88■□□□□ 0.29
RNF40-208ENST00000565995 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
RNF40-208ENST00000565995 AOC3Q16853 763 aa16.88■□□□□ 0.29
RNF40-208ENST00000565995 PSME4Q14997 1843 aa16.88■□□□□ 0.29
RNF40-208ENST00000565995 DUOX1Q9NRD9 1551 aa16.87■□□□□ 0.29
RNF40-208ENST00000565995 NEFMP07197 916 aa16.87■□□□□ 0.29
RNF40-208ENST00000565995 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
RNF40-208ENST00000565995 ABCC4O15439 1325 aa16.87■□□□□ 0.29
RNF40-208ENST00000565995 AOC2O75106 756 aa16.86■□□□□ 0.29
RNF40-208ENST00000565995 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
RNF40-208ENST00000565995 MLLT1Q03111 559 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms