RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 FOXO4P98177 505 aa23.82■■□□□ 1.4
PKD1-230ENST00000565639 NLRP10Q86W26 655 aa23.82■■□□□ 1.4
PKD1-230ENST00000565639 ZBTB38Q8NAP3 1195 aaPredicted RBP23.82■■□□□ 1.4
PKD1-230ENST00000565639 OTUD7AQ8TE49 926 aaPredicted RBP23.82■■□□□ 1.4
PKD1-230ENST00000565639 FBXO41Q8TF61 875 aa23.82■■□□□ 1.4
PKD1-230ENST00000565639 CCNL1Q9UK58 526 aaPredicted RBP23.82■■□□□ 1.4
PKD1-230ENST00000565639 SALL3Q9BXA9 1300 aa23.82■■□□□ 1.4
PKD1-230ENST00000565639 ZNF34Q8IZ26 560 aa23.82■■□□□ 1.4
PKD1-230ENST00000565639 CAMTA2O94983 1202 aa23.81■■□□□ 1.4
PKD1-230ENST00000565639 OS9Q13438 667 aaPredicted RBP23.8■■□□□ 1.4
PKD1-230ENST00000565639 PLA2G12BQ9BX93 195 aa23.8■■□□□ 1.4
PKD1-230ENST00000565639 COPRSQ9NQ92 184 aa23.8■■□□□ 1.4
PKD1-230ENST00000565639 PA2G4Q9UQ80 394 aaKnown RBP23.8■■□□□ 1.4
PKD1-230ENST00000565639 CDHR2Q9BYE9 1310 aa23.8■■□□□ 1.4
PKD1-230ENST00000565639 RGL2O15211 777 aa23.8■■□□□ 1.4
PKD1-230ENST00000565639 TTC22Q5TAA0 569 aa23.8■■□□□ 1.4
PKD1-230ENST00000565639 LMBR1LQ6UX01 489 aa23.8■■□□□ 1.4
PKD1-230ENST00000565639 RFX5P48382 616 aaPredicted RBP23.79■■□□□ 1.4
PKD1-230ENST00000565639 PDE1AP54750 535 aa23.79■■□□□ 1.4
PKD1-230ENST00000565639 G3BP1Q13283 466 aaKnown RBP eCLIP23.79■■□□□ 1.4
PKD1-230ENST00000565639 GPTP24298 496 aa23.78■■□□□ 1.4
PKD1-230ENST00000565639 RPS6KA4O75676 772 aa23.78■■□□□ 1.4
PKD1-230ENST00000565639 KCNQ4P56696 695 aa23.78■■□□□ 1.4
PKD1-230ENST00000565639 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
PKD1-230ENST00000565639 STAP2Q9UGK3 403 aa23.78■■□□□ 1.4
PKD1-230ENST00000565639 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
PKD1-230ENST00000565639 MX1P20591 662 aa23.77■■□□□ 1.4
PKD1-230ENST00000565639 BCL11AQ9H165 835 aa23.77■■□□□ 1.4
PKD1-230ENST00000565639 IL1RAPL2Q9NP60 686 aa23.77■■□□□ 1.4
PKD1-230ENST00000565639 BCORQ6W2J9 1755 aa23.77■■□□□ 1.4
PKD1-230ENST00000565639 GSPT1P15170 499 aaKnown RBP23.76■■□□□ 1.39
PKD1-230ENST00000565639 RXRBP28702 533 aa23.76■■□□□ 1.39
PKD1-230ENST00000565639 PTPN12Q05209 780 aaKnown RBP23.76■■□□□ 1.39
PKD1-230ENST00000565639 CLEC4GQ6UXB4 293 aa23.76■■□□□ 1.39
PKD1-230ENST00000565639 ZNF652Q9Y2D9 606 aa23.76■■□□□ 1.39
PKD1-230ENST00000565639 AOX1Q06278 1338 aa23.76■■□□□ 1.39
PKD1-230ENST00000565639 FAM89AQ96GI7 184 aa23.76■■□□□ 1.39
PKD1-230ENST00000565639 UBN2Q6ZU65 1347 aa23.76■■□□□ 1.39
PKD1-230ENST00000565639 PARP10Q53GL7 1025 aa23.75■■□□□ 1.39
PKD1-230ENST00000565639 CLASRPQ8N2M8 674 aaKnown RBP23.74■■□□□ 1.39
PKD1-230ENST00000565639 TRMT112Q9UI30 125 aaKnown RBP23.74■■□□□ 1.39
PKD1-230ENST00000565639 SASH1O94885 1247 aa23.73■■□□□ 1.39
PKD1-230ENST00000565639 KLHDC4Q8TBB5 520 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 TRIM37O94972 964 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 CSF1RP07333 972 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 SLC27A3Q5K4L6 730 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 AK7Q96M32 723 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 SIL1Q9H173 461 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 CHMP3Q9Y3E7 222 aa23.72■■□□□ 1.39
PKD1-230ENST00000565639 RTCBQ9Y3I0 505 aaKnown RBP23.72■■□□□ 1.39
PKD1-230ENST00000565639 C4BP0C0L5 1744 aa23.71■■□□□ 1.39
PKD1-230ENST00000565639 GNPATO15228 680 aa23.71■■□□□ 1.39
PKD1-230ENST00000565639 HMGB2P26583 209 aaKnown RBP23.71■■□□□ 1.39
PKD1-230ENST00000565639 USP42Q9H9J4 1324 aaKnown RBP23.71■■□□□ 1.39
PKD1-230ENST00000565639 SEC24BO95487 1268 aa23.71■■□□□ 1.39
PKD1-230ENST00000565639 SCN7AQ01118 1682 aa23.71■■□□□ 1.39
PKD1-230ENST00000565639 NARFQ9UHQ1 456 aa23.71■■□□□ 1.39
PKD1-230ENST00000565639 IRS4O14654 1257 aaPredicted RBP23.7■■□□□ 1.38
PKD1-230ENST00000565639 ANP32AP39687 249 aaKnown RBP23.7■■□□□ 1.38
PKD1-230ENST00000565639 NUTM1Q86Y26 1132 aa23.7■■□□□ 1.38
PKD1-230ENST00000565639 CDC45O75419 566 aa23.69■■□□□ 1.38
PKD1-230ENST00000565639 SUSD4Q5VX71 490 aa23.69■■□□□ 1.38
PKD1-230ENST00000565639 UTP14AQ9BVJ6 771 aaKnown RBP23.69■■□□□ 1.38
PKD1-230ENST00000565639 NIP7Q9Y221 180 aaKnown RBP eCLIP23.69■■□□□ 1.38
PKD1-230ENST00000565639 TTC41PQ6P2S7 1318 aa23.69■■□□□ 1.38
PKD1-230ENST00000565639 SDSP20132 328 aa23.69■■□□□ 1.38
PKD1-230ENST00000565639 UPF2Q9HAU5 1272 aaKnown RBP23.69■■□□□ 1.38
PKD1-230ENST00000565639 LRRC4BQ9NT99 713 aa23.69■■□□□ 1.38
PKD1-230ENST00000565639 RGS17Q9UGC6 210 aaPredicted RBP23.69■■□□□ 1.38
PKD1-230ENST00000565639 SH3TC1Q8TE82 1336 aa23.68■■□□□ 1.38
PKD1-230ENST00000565639 PDE8AO60658 829 aa23.68■■□□□ 1.38
PKD1-230ENST00000565639 SYNE4Q8N205 404 aa23.68■■□□□ 1.38
PKD1-230ENST00000565639 FBXO3Q9UK99 471 aa23.68■■□□□ 1.38
PKD1-230ENST00000565639 MYH3P11055 1940 aa23.68■■□□□ 1.38
PKD1-230ENST00000565639 HSP90B1P14625 803 aaKnown RBP23.67■■□□□ 1.38
PKD1-230ENST00000565639 CCDC57Q2TAC2 916 aa23.67■■□□□ 1.38
PKD1-230ENST00000565639 EIF5BO60841 1220 aaKnown RBP23.67■■□□□ 1.38
PKD1-230ENST00000565639 CIAO1O76071 339 aa23.67■■□□□ 1.38
PKD1-230ENST00000565639 IFIT2P09913 472 aaKnown RBP23.67■■□□□ 1.38
PKD1-230ENST00000565639 CTSWP56202 376 aa23.67■■□□□ 1.38
PKD1-230ENST00000565639 TTLL11Q8NHH1 800 aa23.67■■□□□ 1.38
PKD1-230ENST00000565639 TUBGCP6Q96RT7 1819 aa23.66■■□□□ 1.38
PKD1-230ENST00000565639 TBC1D9Q6ZT07 1266 aa23.66■■□□□ 1.38
PKD1-230ENST00000565639 AACSQ86V21 672 aa23.66■■□□□ 1.38
PKD1-230ENST00000565639 NTSR2O95665 410 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 IL15P40933 162 aaPredicted RBP23.65■■□□□ 1.38
PKD1-230ENST00000565639 TSHZ3Q63HK5 1081 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 GPATCH3Q96I76 525 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 EYA2O00167 538 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 ZPR1O75312 459 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 ADRA2BP18089 450 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 IFIT5Q13325 482 aaKnown RBP23.65■■□□□ 1.38
PKD1-230ENST00000565639 PI4K2BQ8TCG2 481 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 EAF2Q96CJ1 260 aaPredicted RBP23.65■■□□□ 1.38
PKD1-230ENST00000565639 BCL2L12Q9HB09 334 aa23.65■■□□□ 1.38
PKD1-230ENST00000565639 ATG9AQ7Z3C6 839 aa23.64■■□□□ 1.38
PKD1-230ENST00000565639 ARHGEF1Q92888 912 aaKnown RBP23.64■■□□□ 1.38
PKD1-230ENST00000565639 ERC2O15083 957 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 USPL1Q5W0Q7 1092 aa23.63■■□□□ 1.37
PKD1-230ENST00000565639 ECHDC1Q9NTX5 307 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms