RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 SLX4Q8IY92 1834 aa15.86■□□□□ 0.13
SPG7-211ENST00000565370 KLRG2A4D1S0 409 aaPredicted RBP15.85■□□□□ 0.13
SPG7-211ENST00000565370 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
SPG7-211ENST00000565370 C21orf2O43822 256 aa15.85■□□□□ 0.13
SPG7-211ENST00000565370 LMNB1P20700 586 aa15.85■□□□□ 0.13
SPG7-211ENST00000565370 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
SPG7-211ENST00000565370 SUSD4Q5VX71 490 aa15.85■□□□□ 0.13
SPG7-211ENST00000565370 STK31Q9BXU1 1019 aa15.85■□□□□ 0.13
SPG7-211ENST00000565370 ZNF219Q9P2Y4 722 aaPredicted RBP15.85■□□□□ 0.13
SPG7-211ENST00000565370 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 CRY2Q49AN0 593 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 WDR63Q8IWG1 891 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 TAOK3Q9H2K8 898 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 LTBP3Q9NS15 1303 aa15.84■□□□□ 0.13
SPG7-211ENST00000565370 LAMB2P55268 1798 aa15.83■□□□□ 0.12
SPG7-211ENST00000565370 NFKBIEO00221 500 aa15.83■□□□□ 0.12
SPG7-211ENST00000565370 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
SPG7-211ENST00000565370 SALL2Q9Y467 1007 aaPredicted RBP15.83■□□□□ 0.12
SPG7-211ENST00000565370 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.12
SPG7-211ENST00000565370 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.12
SPG7-211ENST00000565370 FANCIQ9NVI1 1328 aa15.83■□□□□ 0.12
SPG7-211ENST00000565370 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
SPG7-211ENST00000565370 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
SPG7-211ENST00000565370 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
SPG7-211ENST00000565370 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
SPG7-211ENST00000565370 RBM17Q96I25 401 aaKnown RBP15.82■□□□□ 0.12
SPG7-211ENST00000565370 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
SPG7-211ENST00000565370 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
SPG7-211ENST00000565370 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
SPG7-211ENST00000565370 DICER1Q9UPY3 1922 aaKnown RBP15.82■□□□□ 0.12
SPG7-211ENST00000565370 MYH16Q9H6N6 1097 aa15.81■□□□□ 0.12
SPG7-211ENST00000565370 TMX4Q9H1E5 349 aaPredicted RBP15.8■□□□□ 0.12
SPG7-211ENST00000565370 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
SPG7-211ENST00000565370 RTKN2Q8IZC4 609 aa15.79■□□□□ 0.12
SPG7-211ENST00000565370 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
SPG7-211ENST00000565370 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
SPG7-211ENST00000565370 CACNA1FO60840 1977 aa15.78■□□□□ 0.12
SPG7-211ENST00000565370 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
SPG7-211ENST00000565370 HSP90B1P14625 803 aaKnown RBP15.78■□□□□ 0.12
SPG7-211ENST00000565370 HOXA10P31260 410 aaPredicted RBP15.78■□□□□ 0.12
SPG7-211ENST00000565370 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.12
SPG7-211ENST00000565370 CC2D2BQ6DHV5 1058 aa15.78■□□□□ 0.12
SPG7-211ENST00000565370 C16orf71Q8IYS4 520 aaPredicted RBP15.78■□□□□ 0.12
SPG7-211ENST00000565370 DNAJC5GQ8N7S2 189 aa15.78■□□□□ 0.12
SPG7-211ENST00000565370 CRAMP1Q96RY5 1269 aa15.78■□□□□ 0.12
SPG7-211ENST00000565370 ISCA1Q9BUE6 129 aa15.78■□□□□ 0.12
SPG7-211ENST00000565370 CCER2I3L3R5 266 aa15.77■□□□□ 0.12
SPG7-211ENST00000565370 APLP1P51693 650 aa15.77■□□□□ 0.12
SPG7-211ENST00000565370 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.12
SPG7-211ENST00000565370 SLC10A5Q5PT55 438 aa15.77■□□□□ 0.12
SPG7-211ENST00000565370 C7orf43Q8WVR3 580 aa15.77■□□□□ 0.12
SPG7-211ENST00000565370 ATP5J2-PTCD1G3V325 749 aa15.76■□□□□ 0.11
SPG7-211ENST00000565370 NEXNQ0ZGT2 675 aa15.76■□□□□ 0.11
SPG7-211ENST00000565370 MYD88Q99836 296 aa15.76■□□□□ 0.11
SPG7-211ENST00000565370 ABCC4O15439 1325 aa15.75■□□□□ 0.11
SPG7-211ENST00000565370 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
SPG7-211ENST00000565370 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
SPG7-211ENST00000565370 DPY19L2Q6NUT2 758 aa15.75■□□□□ 0.11
SPG7-211ENST00000565370 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
SPG7-211ENST00000565370 CCDC191Q8NCU4 936 aa15.75■□□□□ 0.11
SPG7-211ENST00000565370 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
SPG7-211ENST00000565370 TOMM70O94826 608 aa15.74■□□□□ 0.11
SPG7-211ENST00000565370 PRELPP51888 382 aa15.74■□□□□ 0.11
SPG7-211ENST00000565370 C3orf67Q6ZVT6 689 aa15.74■□□□□ 0.11
SPG7-211ENST00000565370 PSMD1Q99460 953 aa15.74■□□□□ 0.11
SPG7-211ENST00000565370 METTL22Q9BUU2 404 aaPredicted RBP15.74■□□□□ 0.11
SPG7-211ENST00000565370 NMRK2Q9NPI5 230 aa15.74■□□□□ 0.11
SPG7-211ENST00000565370 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
SPG7-211ENST00000565370 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
SPG7-211ENST00000565370 KSR2Q6VAB6 950 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 ZBTB38Q8NAP3 1195 aaPredicted RBP15.73■□□□□ 0.11
SPG7-211ENST00000565370 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 MAP3K2Q9Y2U5 619 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 SNED1Q8TER0 1413 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 WDR90Q96KV7 1748 aa15.73■□□□□ 0.11
SPG7-211ENST00000565370 LRRC37AA6NMS7 1700 aa15.72■□□□□ 0.11
SPG7-211ENST00000565370 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
SPG7-211ENST00000565370 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
SPG7-211ENST00000565370 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
SPG7-211ENST00000565370 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
SPG7-211ENST00000565370 FLIIQ13045 1269 aa15.72■□□□□ 0.11
SPG7-211ENST00000565370 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
SPG7-211ENST00000565370 GRAPQ13588 217 aa15.72■□□□□ 0.11
SPG7-211ENST00000565370 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
SPG7-211ENST00000565370 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
SPG7-211ENST00000565370 ZNF277Q9NRM2 450 aaPredicted RBP15.72■□□□□ 0.11
SPG7-211ENST00000565370 ZNF521Q96K83 1311 aa15.71■□□□□ 0.11
SPG7-211ENST00000565370 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
SPG7-211ENST00000565370 HTRA3P83110 453 aa15.71■□□□□ 0.11
SPG7-211ENST00000565370 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.11
SPG7-211ENST00000565370 OLFM4Q6UX06 510 aa15.71■□□□□ 0.11
SPG7-211ENST00000565370 ZNF428Q96B54 188 aa15.71■□□□□ 0.11
SPG7-211ENST00000565370 E9PSI1 815 aa15.7■□□□□ 0.1
SPG7-211ENST00000565370 BBOX1O75936 387 aa15.7■□□□□ 0.1
SPG7-211ENST00000565370 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms