RNA–Protein interactions for RNA: ENST00000564764.5

RNPS1-211, Transcript of RNA binding protein with serine rich domain 1, human

TSL 3

Gene RNPS1, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-211	ENST00000564764	ERFE	Q4G0M1	354 aa		13.77	□□□□□ -0.21
RNPS1-211	ENST00000564764	SLC10A5	Q5PT55	438 aa		13.77	□□□□□ -0.21
RNPS1-211	ENST00000564764	NUTM1	Q86Y26	1132 aa		13.77	□□□□□ -0.21
RNPS1-211	ENST00000564764	TAOK3	Q9H2K8	898 aa		13.77	□□□□□ -0.21
RNPS1-211	ENST00000564764	MRS2	Q9HD23	443 aa		13.77	□□□□□ -0.21
RNPS1-211	ENST00000564764	HYPK	Q9NX55	129 aa		13.77	□□□□□ -0.21
RNPS1-211	ENST00000564764	SNED1	Q8TER0	1413 aa		13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	IL16	Q14005	1332 aa		13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	TCIRG1	Q13488	830 aa		13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	CCDC93	Q567U6	631 aa		13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	PLBD2	Q8NHP8	589 aa		13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	NECTIN2	Q92692	538 aa		13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	UTP14A	Q9BVJ6	771 aa	Known RBP	13.76	□□□□□ -0.21
RNPS1-211	ENST00000564764	GLTPD2	A6NH11	291 aa		13.75	□□□□□ -0.21
RNPS1-211	ENST00000564764	TOMM70	O94826	608 aa		13.75	□□□□□ -0.21
RNPS1-211	ENST00000564764	NLRP10	Q86W26	655 aa		13.75	□□□□□ -0.21
RNPS1-211	ENST00000564764	WWC1	Q8IX03	1113 aa		13.75	□□□□□ -0.21
RNPS1-211	ENST00000564764	NMRK2	Q9NPI5	230 aa		13.75	□□□□□ -0.21
RNPS1-211	ENST00000564764	AIMP1	Q12904	312 aa	Known RBP	13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	GRIPAP1	Q4V328	841 aa		13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	CC2D2B	Q6DHV5	1058 aa		13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	ANKRD13D	Q6ZTN6	518 aa		13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	RTKN2	Q8IZC4	609 aa		13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	NLRP3	Q96P20	1036 aa		13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	CRAMP1	Q96RY5	1269 aa		13.74	□□□□□ -0.21
RNPS1-211	ENST00000564764	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
RNPS1-211	ENST00000564764	TRIM28	Q13263	835 aa	Known RBP	13.73	□□□□□ -0.21
RNPS1-211	ENST00000564764	RPGR	Q92834	1020 aa	Known RBP	13.73	□□□□□ -0.21
RNPS1-211	ENST00000564764	ISCA1	Q9BUE6	129 aa		13.73	□□□□□ -0.21
RNPS1-211	ENST00000564764	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.73	□□□□□ -0.21
RNPS1-211	ENST00000564764	WDR90	Q96KV7	1748 aa		13.73	□□□□□ -0.21
RNPS1-211	ENST00000564764	SH3TC1	Q8TE82	1336 aa		13.72	□□□□□ -0.21
RNPS1-211	ENST00000564764	C8orf58	Q8NAV2	365 aa		13.72	□□□□□ -0.21
RNPS1-211	ENST00000564764	RBM46	Q8TBY0	533 aa	Known RBP	13.72	□□□□□ -0.21
RNPS1-211	ENST00000564764	RBM17	Q96I25	401 aa	Known RBP	13.72	□□□□□ -0.21
RNPS1-211	ENST00000564764	PSMD1	Q99460	953 aa		13.72	□□□□□ -0.21
RNPS1-211	ENST00000564764	HSPA6	P17066	643 aa		13.71	□□□□□ -0.21
RNPS1-211	ENST00000564764	CCDC30	Q5VVM6	783 aa		13.71	□□□□□ -0.21
RNPS1-211	ENST00000564764	DPY19L2	Q6NUT2	758 aa		13.71	□□□□□ -0.21
RNPS1-211	ENST00000564764	WDR63	Q8IWG1	891 aa		13.71	□□□□□ -0.21
RNPS1-211	ENST00000564764	LAMB2	P55268	1798 aa		13.71	□□□□□ -0.22
RNPS1-211	ENST00000564764	FSTL1	Q12841	308 aa		13.7	□□□□□ -0.22
RNPS1-211	ENST00000564764	C3orf67	Q6ZVT6	689 aa		13.7	□□□□□ -0.22
RNPS1-211	ENST00000564764	RRAGC	Q9HB90	399 aa		13.7	□□□□□ -0.22
RNPS1-211	ENST00000564764	TRMT112	Q9UI30	125 aa	Known RBP	13.7	□□□□□ -0.22
RNPS1-211	ENST00000564764	VEGFA	P15692	232 aa	Predicted RBP	13.69	□□□□□ -0.22
RNPS1-211	ENST00000564764	GOLGA2	Q08379	1002 aa		13.69	□□□□□ -0.22
RNPS1-211	ENST00000564764	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.69	□□□□□ -0.22
RNPS1-211	ENST00000564764	TSPYL6	Q8N831	410 aa		13.69	□□□□□ -0.22
RNPS1-211	ENST00000564764	DDX60	Q8IY21	1712 aa	Known RBP	13.69	□□□□□ -0.22
RNPS1-211	ENST00000564764	ELL2	O00472	640 aa	Predicted RBP	13.68	□□□□□ -0.22
RNPS1-211	ENST00000564764	PPEF1	O14829	653 aa	Predicted RBP	13.68	□□□□□ -0.22
RNPS1-211	ENST00000564764	OLFM4	Q6UX06	510 aa		13.68	□□□□□ -0.22
RNPS1-211	ENST00000564764	RIC3	Q7Z5B4	369 aa		13.68	□□□□□ -0.22
RNPS1-211	ENST00000564764	TSR2	Q969E8	191 aa	Known RBP	13.68	□□□□□ -0.22
RNPS1-211	ENST00000564764	PHAX	Q9H814	394 aa	Known RBP	13.68	□□□□□ -0.22
RNPS1-211	ENST00000564764	ABCC4	O15439	1325 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	POTEC	B2RU33	542 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	BBOX1	O75936	387 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	DDX58	O95786	925 aa	Known RBP	13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	HCLS1	P14317	486 aa	Predicted RBP	13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	IARS	P41252	1262 aa	Known RBP	13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	SF3B3	Q15393	1217 aa	Known RBP	13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	TMC4	Q7Z404	712 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	SYNE4	Q8N205	404 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	VPS33B	Q9H267	617 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	ATP6V0A2	Q9Y487	856 aa		13.67	□□□□□ -0.22
RNPS1-211	ENST00000564764	FANCI	Q9NVI1	1328 aa		13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	CACNA1F	O60840	1977 aa		13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	FZD9	O00144	591 aa		13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	HSP90B1	P14625	803 aa	Known RBP	13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	GRAP	Q13588	217 aa		13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	TWISTNB	Q3B726	338 aa	Predicted RBP	13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	CCDC191	Q8NCU4	936 aa		13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	GRAPL	Q8TC17	118 aa	Predicted RBP	13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.66	□□□□□ -0.22
RNPS1-211	ENST00000564764	SCN4A	P35499	1836 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	ATP5J2-PTCD1	G3V325	749 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	APLP1	P51693	650 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	DDX46	Q7L014	1031 aa	Known RBP	13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	SP8	Q8IXZ3	490 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	SMC1B	Q8NDV3	1235 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	FAM89A	Q96GI7	184 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	METTL22	Q9BUU2	404 aa	Predicted RBP	13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	STK31	Q9BXU1	1019 aa		13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	TMX4	Q9H1E5	349 aa	Predicted RBP	13.65	□□□□□ -0.22
RNPS1-211	ENST00000564764	LRRC37A	A6NMS7	1700 aa		13.64	□□□□□ -0.23
RNPS1-211	ENST00000564764	KSR2	Q6VAB6	950 aa		13.64	□□□□□ -0.23
RNPS1-211	ENST00000564764	IQCA1L	A6NCM1	817 aa		13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	IRS4	O14654	1257 aa	Predicted RBP	13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	DDN	O94850	711 aa	Predicted RBP	13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	PCCA	P05165	728 aa	Predicted RBP	13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	FAM9B	Q8IZU0	186 aa		13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	SUPT20H	Q8NEM7	779 aa		13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	JDP2	Q8WYK2	163 aa		13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	MYD88	Q99836	296 aa		13.63	□□□□□ -0.23
RNPS1-211	ENST00000564764	CWC25	Q9NXE8	425 aa	Predicted RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms