RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CLP1Q92989 425 aaKnown RBP9.7□□□□□ -0.86
UBR1-205ENST00000564540 MKNK1Q9BUB5 465 aa9.7□□□□□ -0.86
UBR1-205ENST00000564540 KRTAP9-2Q9BYQ4 174 aa9.7□□□□□ -0.86
UBR1-205ENST00000564540 CXXC1Q9P0U4 656 aaPredicted RBP9.7□□□□□ -0.86
UBR1-205ENST00000564540 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
UBR1-205ENST00000564540 ARAFP10398 606 aa9.69□□□□□ -0.86
UBR1-205ENST00000564540 PCBP4P57723 403 aaKnown RBP9.69□□□□□ -0.86
UBR1-205ENST00000564540 PODNQ7Z5L7 613 aa9.69□□□□□ -0.86
UBR1-205ENST00000564540 GALNT6Q8NCL4 622 aa9.69□□□□□ -0.86
UBR1-205ENST00000564540 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
UBR1-205ENST00000564540 GDF2Q9UK05 429 aaPredicted RBP9.69□□□□□ -0.86
UBR1-205ENST00000564540 LRFN2Q9ULH4 789 aa9.69□□□□□ -0.86
UBR1-205ENST00000564540 PRR12Q9ULL5 1215 aa9.69□□□□□ -0.86
UBR1-205ENST00000564540 SHISA8B8ZZ34 492 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 HIF1AQ16665 826 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 Q8N3U1 123 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 GOLGA6L1Q8N7Z2 621 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 PSMG3-AS1Q96PY0 264 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
UBR1-205ENST00000564540 DMGDHQ9UI17 866 aaKnown RBP9.68□□□□□ -0.86
UBR1-205ENST00000564540 CARNS1A5YM72 827 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 COX20Q5RI15 118 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 ZNF468Q5VIY5 522 aaPredicted RBP9.67□□□□□ -0.86
UBR1-205ENST00000564540 SLCO4C1Q6ZQN7 724 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 RAB44Q7Z6P3 723 aaPredicted RBP9.67□□□□□ -0.86
UBR1-205ENST00000564540 NEDD1Q8NHV4 660 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 EDARADDQ8WWZ3 215 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 MYO19Q96H55 970 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 SAP130Q9H0E3 1048 aa9.67□□□□□ -0.86
UBR1-205ENST00000564540 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
UBR1-205ENST00000564540 ATP2B4P23634 1241 aa9.66□□□□□ -0.86
UBR1-205ENST00000564540 ADH6P28332 368 aa9.66□□□□□ -0.86
UBR1-205ENST00000564540 IER5Q5VY09 327 aa9.66□□□□□ -0.86
UBR1-205ENST00000564540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.86
UBR1-205ENST00000564540 KCNH4Q9UQ05 1017 aa9.66□□□□□ -0.86
UBR1-205ENST00000564540 EPXP11678 715 aa9.65□□□□□ -0.86
UBR1-205ENST00000564540 KCNQ4P56696 695 aa9.65□□□□□ -0.86
UBR1-205ENST00000564540 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
UBR1-205ENST00000564540 NAA30Q147X3 362 aaPredicted RBP9.65□□□□□ -0.86
UBR1-205ENST00000564540 C11orf91Q3C1V1 193 aa9.65□□□□□ -0.86
UBR1-205ENST00000564540 SYT9Q86SS6 491 aa9.65□□□□□ -0.86
UBR1-205ENST00000564540 FCHSD1Q86WN1 690 aa9.65□□□□□ -0.86
UBR1-205ENST00000564540 KRTAP9-6A0A140TA67 174 aa9.64□□□□□ -0.87
UBR1-205ENST00000564540 SCNN1AP37088 669 aa9.64□□□□□ -0.87
UBR1-205ENST00000564540 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
UBR1-205ENST00000564540 IDH3AP50213 366 aa9.63□□□□□ -0.87
UBR1-205ENST00000564540 COL26A1Q96A83 441 aa9.63□□□□□ -0.87
UBR1-205ENST00000564540 IFT43Q96FT9 208 aa9.63□□□□□ -0.87
UBR1-205ENST00000564540 AVENQ9NQS1 362 aaPredicted RBP9.63□□□□□ -0.87
UBR1-205ENST00000564540 MICAL2O94851 1124 aa9.62□□□□□ -0.87
UBR1-205ENST00000564540 INPP5BP32019 993 aa9.62□□□□□ -0.87
UBR1-205ENST00000564540 BAG6P46379 1132 aa9.62□□□□□ -0.87
UBR1-205ENST00000564540 C16orf46Q6P387 395 aa9.62□□□□□ -0.87
UBR1-205ENST00000564540 AMPD1P23109 780 aa9.61□□□□□ -0.87
UBR1-205ENST00000564540 FAM26DQ5JW98 314 aa9.61□□□□□ -0.87
UBR1-205ENST00000564540 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
UBR1-205ENST00000564540 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
UBR1-205ENST00000564540 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
UBR1-205ENST00000564540 SNRPNP63162 240 aaKnown RBP9.6□□□□□ -0.87
UBR1-205ENST00000564540 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
UBR1-205ENST00000564540 ETFBKMTQ8IXQ9 262 aa9.6□□□□□ -0.87
UBR1-205ENST00000564540 BHMTQ93088 406 aa9.6□□□□□ -0.87
UBR1-205ENST00000564540 BTBD6Q96KE9 485 aa9.6□□□□□ -0.87
UBR1-205ENST00000564540 TNFRSF10BO14763 440 aa9.59□□□□□ -0.87
UBR1-205ENST00000564540 OPLAHO14841 1288 aa9.59□□□□□ -0.87
UBR1-205ENST00000564540 ARSDP51689 593 aa9.59□□□□□ -0.87
UBR1-205ENST00000564540 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
UBR1-205ENST00000564540 GSX2Q9BZM3 304 aa9.59□□□□□ -0.87
UBR1-205ENST00000564540 RRAGCQ9HB90 399 aa9.59□□□□□ -0.87
UBR1-205ENST00000564540 KRBA1A5PL33 1030 aa9.58□□□□□ -0.88
UBR1-205ENST00000564540 SIN3BO75182 1162 aa9.58□□□□□ -0.88
UBR1-205ENST00000564540 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
UBR1-205ENST00000564540 MDFIQ99750 246 aa9.58□□□□□ -0.88
UBR1-205ENST00000564540 EPB42P16452 691 aa9.57□□□□□ -0.88
UBR1-205ENST00000564540 SSFA2P28290 1259 aa9.57□□□□□ -0.88
UBR1-205ENST00000564540 CHSY3Q70JA7 882 aa9.57□□□□□ -0.88
UBR1-205ENST00000564540 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
UBR1-205ENST00000564540 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
UBR1-205ENST00000564540 BRD2P25440 801 aaKnown RBP9.56□□□□□ -0.88
UBR1-205ENST00000564540 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
UBR1-205ENST00000564540 CCINQ13939 588 aa9.56□□□□□ -0.88
UBR1-205ENST00000564540 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
UBR1-205ENST00000564540 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
UBR1-205ENST00000564540 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
UBR1-205ENST00000564540 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
UBR1-205ENST00000564540 PHLDB3Q6NSJ2 640 aa9.55□□□□□ -0.88
UBR1-205ENST00000564540 KRT25Q7Z3Z0 450 aa9.55□□□□□ -0.88
UBR1-205ENST00000564540 TNFRSF25Q93038 417 aa9.55□□□□□ -0.88
UBR1-205ENST00000564540 IGFLR1Q9H665 355 aa9.55□□□□□ -0.88
UBR1-205ENST00000564540 ADARB2-AS1A8MUL3 147 aa9.54□□□□□ -0.88
UBR1-205ENST00000564540 ZBTB39O15060 712 aa9.54□□□□□ -0.88
UBR1-205ENST00000564540 NFKB1P19838 968 aa9.54□□□□□ -0.88
UBR1-205ENST00000564540 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
UBR1-205ENST00000564540 PNMA5Q96PV4 448 aa9.54□□□□□ -0.88
UBR1-205ENST00000564540 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
UBR1-205ENST00000564540 FURINP09958 794 aa9.53□□□□□ -0.88
UBR1-205ENST00000564540 ADH7P40394 386 aa9.53□□□□□ -0.88
UBR1-205ENST00000564540 DGKGP49619 791 aa9.53□□□□□ -0.88
UBR1-205ENST00000564540 CMTR1Q8N1G2 835 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms