RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
AC004449.1-201ENST00000564240 ABCC12Q96J65 1359 aa21.48■■□□□ 1.03
AC004449.1-201ENST00000564240 POTEIP0CG38 1075 aa21.47■■□□□ 1.03
AC004449.1-201ENST00000564240 POTEJP0CG39 1038 aa21.47■■□□□ 1.03
AC004449.1-201ENST00000564240 UTP14AQ9BVJ6 771 aaKnown RBP21.47■■□□□ 1.03
AC004449.1-201ENST00000564240 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
AC004449.1-201ENST00000564240 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
AC004449.1-201ENST00000564240 CRY2Q49AN0 593 aa21.46■■□□□ 1.03
AC004449.1-201ENST00000564240 RUNDC1Q96C34 613 aa21.46■■□□□ 1.03
AC004449.1-201ENST00000564240 TAF1DQ9H5J8 278 aaPredicted RBP21.46■■□□□ 1.03
AC004449.1-201ENST00000564240 HACL1Q9UJ83 578 aa21.46■■□□□ 1.03
AC004449.1-201ENST00000564240 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
AC004449.1-201ENST00000564240 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
AC004449.1-201ENST00000564240 GJA3Q9Y6H8 435 aa21.45■■□□□ 1.02
AC004449.1-201ENST00000564240 ZNF541Q9H0D2 1346 aa21.45■■□□□ 1.02
AC004449.1-201ENST00000564240 NTSR2O95665 410 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 HOXA10P31260 410 aaPredicted RBP21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 PDIA6Q15084 440 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 PROSER3Q2NL68 480 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 LDHDQ86WU2 507 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 LARGE2Q8N3Y3 721 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 L3MBTL3Q96JM7 780 aaPredicted RBP21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 CRAMP1Q96RY5 1269 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 PSMD1Q99460 953 aa21.44■■□□□ 1.02
AC004449.1-201ENST00000564240 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
AC004449.1-201ENST00000564240 GRIPAP1Q4V328 841 aa21.43■■□□□ 1.02
AC004449.1-201ENST00000564240 HSP90AB3PQ58FF7 597 aa21.43■■□□□ 1.02
AC004449.1-201ENST00000564240 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
AC004449.1-201ENST00000564240 EPHX2P34913 555 aa21.42■■□□□ 1.02
AC004449.1-201ENST00000564240 IBTKQ9P2D0 1353 aaPredicted RBP21.42■■□□□ 1.02
AC004449.1-201ENST00000564240 MKRN1Q9UHC7 482 aaKnown RBP21.42■■□□□ 1.02
AC004449.1-201ENST00000564240 FZD9O00144 591 aa21.41■■□□□ 1.02
AC004449.1-201ENST00000564240 CREBZFQ9NS37 354 aa21.41■■□□□ 1.02
AC004449.1-201ENST00000564240 ADAMTS8Q9UP79 889 aa21.41■■□□□ 1.02
AC004449.1-201ENST00000564240 RNF123Q5XPI4 1314 aa21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 CHL1O00533 1208 aa21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 LMOD1P29536 600 aaPredicted RBP21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 C3orf67Q6ZVT6 689 aa21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 PNMA8AQ86V59 439 aaPredicted RBP21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 GPC2Q8N158 579 aa21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 TRMT112Q9UI30 125 aaKnown RBP21.4■■□□□ 1.02
AC004449.1-201ENST00000564240 KRT24Q2M2I5 525 aa21.39■■□□□ 1.01
AC004449.1-201ENST00000564240 SLC10A5Q5PT55 438 aa21.39■■□□□ 1.01
AC004449.1-201ENST00000564240 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.01
AC004449.1-201ENST00000564240 HSPA1AP0DMV8 641 aaKnown RBP21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 HSPA1BP0DMV9 641 aaKnown RBP21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 HCLS1P14317 486 aaPredicted RBP21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 TCIRG1Q13488 830 aa21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 COL13A1Q5TAT6 717 aaPredicted RBP21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 LRP10Q7Z4F1 713 aa21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 NIM1KQ8IY84 436 aa21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 ZNF428Q96B54 188 aa21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
AC004449.1-201ENST00000564240 SCN4AP35499 1836 aa21.37■■□□□ 1.01
AC004449.1-201ENST00000564240 PPIP5K2O43314 1243 aa21.37■■□□□ 1.01
AC004449.1-201ENST00000564240 DDX46Q7L014 1031 aaKnown RBP21.37■■□□□ 1.01
AC004449.1-201ENST00000564240 NLRP10Q86W26 655 aa21.37■■□□□ 1.01
AC004449.1-201ENST00000564240 CHPF2Q9P2E5 772 aa21.37■■□□□ 1.01
AC004449.1-201ENST00000564240 SUPT20HQ8NEM7 779 aa21.36■■□□□ 1.01
AC004449.1-201ENST00000564240 RIC1Q4ADV7 1423 aa21.36■■□□□ 1.01
AC004449.1-201ENST00000564240 TMEM88BA6NKF7 163 aa21.35■■□□□ 1.01
AC004449.1-201ENST00000564240 BBOX1O75936 387 aa21.35■■□□□ 1.01
AC004449.1-201ENST00000564240 MAP1SQ66K74 1059 aaPredicted RBP21.35■■□□□ 1.01
AC004449.1-201ENST00000564240 CNTROBQ8N137 903 aa21.35■■□□□ 1.01
AC004449.1-201ENST00000564240 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
AC004449.1-201ENST00000564240 SH3TC1Q8TE82 1336 aa21.34■■□□□ 1.01
AC004449.1-201ENST00000564240 AOC3Q16853 763 aa21.34■■□□□ 1.01
AC004449.1-201ENST00000564240 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
AC004449.1-201ENST00000564240 ANKRD13DQ6ZTN6 518 aa21.34■■□□□ 1.01
AC004449.1-201ENST00000564240 DBF4Q9UBU7 674 aaPredicted RBP21.34■■□□□ 1.01
AC004449.1-201ENST00000564240 ABCC4O15439 1325 aa21.33■■□□□ 1.01
AC004449.1-201ENST00000564240 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
AC004449.1-201ENST00000564240 TNS4Q8IZW8 715 aa21.33■■□□□ 1.01
AC004449.1-201ENST00000564240 MPNDQ8N594 471 aa21.33■■□□□ 1.01
AC004449.1-201ENST00000564240 ITGBL1O95965 494 aaPredicted RBP21.32■■□□□ 1
AC004449.1-201ENST00000564240 DUSP27Q5VZP5 1158 aa21.32■■□□□ 1
AC004449.1-201ENST00000564240 SP8Q8IXZ3 490 aa21.32■■□□□ 1
AC004449.1-201ENST00000564240 PLBD2Q8NHP8 589 aa21.32■■□□□ 1
AC004449.1-201ENST00000564240 CFAP44Q96MT7 982 aa21.32■■□□□ 1
AC004449.1-201ENST00000564240 PASKQ96RG2 1323 aa21.31■■□□□ 1
AC004449.1-201ENST00000564240 CAPN15O75808 1086 aa21.31■■□□□ 1
AC004449.1-201ENST00000564240 EPS15P42566 896 aa21.31■■□□□ 1
AC004449.1-201ENST00000564240 VPS33BQ9H267 617 aa21.31■■□□□ 1
AC004449.1-201ENST00000564240 PRKRIP1Q9H875 184 aaPredicted RBP21.31■■□□□ 1
AC004449.1-201ENST00000564240 HYPKQ9NX55 129 aa21.31■■□□□ 1
AC004449.1-201ENST00000564240 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
AC004449.1-201ENST00000564240 HOXB7P09629 217 aa21.3■■□□□ 1
AC004449.1-201ENST00000564240 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
AC004449.1-201ENST00000564240 APAF1O14727 1248 aa21.29■■□□□ 1
AC004449.1-201ENST00000564240 GRAPQ13588 217 aa21.29■■□□□ 1
AC004449.1-201ENST00000564240 RTL5Q5HYW3 569 aaPredicted RBP21.29■■□□□ 1
AC004449.1-201ENST00000564240 RIC3Q7Z5B4 369 aa21.29■■□□□ 1
AC004449.1-201ENST00000564240 GRAPLQ8TC17 118 aaPredicted RBP21.29■■□□□ 1
AC004449.1-201ENST00000564240 MBIPQ9NS73 344 aa21.29■■□□□ 1
AC004449.1-201ENST00000564240 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
AC004449.1-201ENST00000564240 ABT1Q9ULW3 272 aaKnown RBP21.29■■□□□ 1
AC004449.1-201ENST00000564240 CALD1Q05682 793 aaKnown RBP21.28■■□□□ 1
AC004449.1-201ENST00000564240 DEFB115Q30KQ5 88 aa21.28■■□□□ 1
AC004449.1-201ENST00000564240 FAM89AQ96GI7 184 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms