RNA–Protein interactions for RNA: ENST00000563674.1

SH2B1-209, Transcript of SH2B adaptor protein 1, humanhuman

TSL 3

Gene SH2B1, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-209ENST00000563674 RIC1Q4ADV7 1423 aa29.77■■■□□ 2.36
SH2B1-209ENST00000563674 ZNF853P0CG23 659 aa29.76■■■□□ 2.35
SH2B1-209ENST00000563674 VEGFAP15692 232 aaPredicted RBP29.76■■■□□ 2.35
SH2B1-209ENST00000563674 RBM17Q96I25 401 aaKnown RBP29.76■■■□□ 2.35
SH2B1-209ENST00000563674 NLRP3Q96P20 1036 aa29.76■■■□□ 2.35
SH2B1-209ENST00000563674 RNF123Q5XPI4 1314 aa29.75■■■□□ 2.35
SH2B1-209ENST00000563674 FKBP4Q02790 459 aaKnown RBP eCLIP29.75■■■□□ 2.35
SH2B1-209ENST00000563674 TCIRG1Q13488 830 aa29.75■■■□□ 2.35
SH2B1-209ENST00000563674 CC2D2BQ6DHV5 1058 aa29.75■■■□□ 2.35
SH2B1-209ENST00000563674 CHMP4AQ9BY43 222 aa29.75■■■□□ 2.35
SH2B1-209ENST00000563674 HYPKQ9NX55 129 aa29.74■■■□□ 2.35
SH2B1-209ENST00000563674 ARFGEF2Q9Y6D5 1785 aa29.73■■■□□ 2.35
SH2B1-209ENST00000563674 HOXA10P31260 410 aaPredicted RBP29.73■■■□□ 2.35
SH2B1-209ENST00000563674 FSTL1Q12841 308 aa29.73■■■□□ 2.35
SH2B1-209ENST00000563674 FER1L6Q2WGJ9 1857 aa29.72■■■□□ 2.35
SH2B1-209ENST00000563674 PLBD2Q8NHP8 589 aa29.72■■■□□ 2.35
SH2B1-209ENST00000563674 TMX4Q9H1E5 349 aaPredicted RBP29.72■■■□□ 2.35
SH2B1-209ENST00000563674 MRS2Q9HD23 443 aa29.72■■■□□ 2.35
SH2B1-209ENST00000563674 APLP1P51693 650 aa29.71■■■□□ 2.35
SH2B1-209ENST00000563674 GRIPAP1Q4V328 841 aa29.71■■■□□ 2.35
SH2B1-209ENST00000563674 CCDC184Q52MB2 194 aa29.71■■■□□ 2.35
SH2B1-209ENST00000563674 SLC10A5Q5PT55 438 aa29.71■■■□□ 2.35
SH2B1-209ENST00000563674 ANKRD13DQ6ZTN6 518 aa29.71■■■□□ 2.35
SH2B1-209ENST00000563674 CRAMP1Q96RY5 1269 aa29.71■■■□□ 2.35
SH2B1-209ENST00000563674 TNRC6CQ9HCJ0 1690 aaKnown RBP29.7■■■□□ 2.35
SH2B1-209ENST00000563674 NLRP10Q86W26 655 aa29.7■■■□□ 2.35
SH2B1-209ENST00000563674 TRMT112Q9UI30 125 aaKnown RBP29.7■■■□□ 2.35
SH2B1-209ENST00000563674 CACNA1SQ13698 1873 aa29.7■■■□□ 2.34
SH2B1-209ENST00000563674 CCDC88AQ3V6T2 1871 aa29.68■■■□□ 2.34
SH2B1-209ENST00000563674 SMC1BQ8NDV3 1235 aa29.68■■■□□ 2.34
SH2B1-209ENST00000563674 OLFM4Q6UX06 510 aa29.67■■■□□ 2.34
SH2B1-209ENST00000563674 SYNE4Q8N205 404 aa29.67■■■□□ 2.34
SH2B1-209ENST00000563674 ZNF277Q9NRM2 450 aaPredicted RBP29.67■■■□□ 2.34
SH2B1-209ENST00000563674 TIAM2Q8IVF5 1701 aa29.67■■■□□ 2.34
SH2B1-209ENST00000563674 SH3TC1Q8TE82 1336 aa29.67■■■□□ 2.34
SH2B1-209ENST00000563674 ELL2O00472 640 aaPredicted RBP29.66■■■□□ 2.34
SH2B1-209ENST00000563674 CCDC27Q2M243 656 aa29.66■■■□□ 2.34
SH2B1-209ENST00000563674 PSMD1Q99460 953 aa29.66■■■□□ 2.34
SH2B1-209ENST00000563674 PPEF1O14829 653 aaPredicted RBP29.65■■■□□ 2.34
SH2B1-209ENST00000563674 GOLGA2Q08379 1002 aa29.65■■■□□ 2.34
SH2B1-209ENST00000563674 IARSP41252 1262 aaKnown RBP29.64■■■□□ 2.34
SH2B1-209ENST00000563674 C3orf67Q6ZVT6 689 aa29.63■■■□□ 2.33
SH2B1-209ENST00000563674 RIC3Q7Z5B4 369 aa29.63■■■□□ 2.33
SH2B1-209ENST00000563674 DICER1Q9UPY3 1922 aaKnown RBP29.63■■■□□ 2.33
SH2B1-209ENST00000563674 DDNO94850 711 aaPredicted RBP29.62■■■□□ 2.33
SH2B1-209ENST00000563674 HCLS1P14317 486 aaPredicted RBP29.62■■■□□ 2.33
SH2B1-209ENST00000563674 NCBP3Q53F19 620 aaKnown RBP29.62■■■□□ 2.33
SH2B1-209ENST00000563674 CCDC30Q5VVM6 783 aa29.62■■■□□ 2.33
SH2B1-209ENST00000563674 JDP2Q8WYK2 163 aa29.62■■■□□ 2.33
SH2B1-209ENST00000563674 TCERG1O14776 1098 aaKnown RBP29.61■■■□□ 2.33
SH2B1-209ENST00000563674 DDX46Q7L014 1031 aaKnown RBP29.61■■■□□ 2.33
SH2B1-209ENST00000563674 C8orf58Q8NAV2 365 aa29.61■■■□□ 2.33
SH2B1-209ENST00000563674 ISCA1Q9BUE6 129 aa29.61■■■□□ 2.33
SH2B1-209ENST00000563674 IQCA1LA6NCM1 817 aa29.6■■■□□ 2.33
SH2B1-209ENST00000563674 WWC1Q8IX03 1113 aa29.6■■■□□ 2.33
SH2B1-209ENST00000563674 ATP5J2-PTCD1G3V325 749 aa29.59■■■□□ 2.33
SH2B1-209ENST00000563674 BBOX1O75936 387 aa29.59■■■□□ 2.33
SH2B1-209ENST00000563674 DDX58O95786 925 aaKnown RBP29.59■■■□□ 2.33
SH2B1-209ENST00000563674 POTECB2RU33 542 aa29.58■■■□□ 2.33
SH2B1-209ENST00000563674 ANKRD36CQ5JPF3 1778 aa29.57■■■□□ 2.32
SH2B1-209ENST00000563674 WDR90Q96KV7 1748 aa29.57■■■□□ 2.32
SH2B1-209ENST00000563674 ABCC4O15439 1325 aa29.57■■■□□ 2.32
SH2B1-209ENST00000563674 TRIM28Q13263 835 aaKnown RBP29.57■■■□□ 2.32
SH2B1-209ENST00000563674 ATP6V0A2Q9Y487 856 aa29.57■■■□□ 2.32
SH2B1-209ENST00000563674 IL16Q14005 1332 aa29.56■■■□□ 2.32
SH2B1-209ENST00000563674 PHAXQ9H814 394 aaKnown RBP29.56■■■□□ 2.32
SH2B1-209ENST00000563674 HSP90B1P14625 803 aaKnown RBP29.55■■■□□ 2.32
SH2B1-209ENST00000563674 EIF6P56537 245 aaKnown RBP29.55■■■□□ 2.32
SH2B1-209ENST00000563674 LARGE2Q8N3Y3 721 aa29.55■■■□□ 2.32
SH2B1-209ENST00000563674 SUPT20HQ8NEM7 779 aa29.55■■■□□ 2.32
SH2B1-209ENST00000563674 TSR2Q969E8 191 aaKnown RBP29.55■■■□□ 2.32
SH2B1-209ENST00000563674 L3MBTL3Q96JM7 780 aaPredicted RBP29.55■■■□□ 2.32
SH2B1-209ENST00000563674 STK31Q9BXU1 1019 aa29.55■■■□□ 2.32
SH2B1-209ENST00000563674 FZD9O00144 591 aa29.54■■■□□ 2.32
SH2B1-209ENST00000563674 GRAPQ13588 217 aa29.54■■■□□ 2.32
SH2B1-209ENST00000563674 GRAPLQ8TC17 118 aaPredicted RBP29.54■■■□□ 2.32
SH2B1-209ENST00000563674 FAM89AQ96GI7 184 aa29.54■■■□□ 2.32
SH2B1-209ENST00000563674 SNED1Q8TER0 1413 aa29.54■■■□□ 2.32
SH2B1-209ENST00000563674 TMC4Q7Z404 712 aa29.53■■■□□ 2.32
SH2B1-209ENST00000563674 SP8Q8IXZ3 490 aa29.53■■■□□ 2.32
SH2B1-209ENST00000563674 ZNF428Q96B54 188 aa29.53■■■□□ 2.32
SH2B1-209ENST00000563674 ZNF541Q9H0D2 1346 aa29.52■■■□□ 2.32
SH2B1-209ENST00000563674 TSPYL6Q8N831 410 aa29.52■■■□□ 2.32
SH2B1-209ENST00000563674 MYD88Q99836 296 aa29.52■■■□□ 2.32
SH2B1-209ENST00000563674 VPS33BQ9H267 617 aa29.52■■■□□ 2.32
SH2B1-209ENST00000563674 IRS4O14654 1257 aaPredicted RBP29.5■■■□□ 2.31
SH2B1-209ENST00000563674 TWISTNBQ3B726 338 aaPredicted RBP29.5■■■□□ 2.31
SH2B1-209ENST00000563674 DPP8Q6V1X1 898 aaPredicted RBP29.5■■■□□ 2.31
SH2B1-209ENST00000563674 NIM1KQ8IY84 436 aa29.5■■■□□ 2.31
SH2B1-209ENST00000563674 GPC2Q8N158 579 aa29.5■■■□□ 2.31
SH2B1-209ENST00000563674 SALL2Q9Y467 1007 aaPredicted RBP29.5■■■□□ 2.31
SH2B1-209ENST00000563674 CEP350Q5VT06 3117 aa29.49■■■□□ 2.31
SH2B1-209ENST00000563674 PPIP5K2O43314 1243 aa29.49■■■□□ 2.31
SH2B1-209ENST00000563674 SF3B3Q15393 1217 aaKnown RBP29.49■■■□□ 2.31
SH2B1-209ENST00000563674 RTL5Q5HYW3 569 aaPredicted RBP29.49■■■□□ 2.31
SH2B1-209ENST00000563674 CHADLQ6NUI6 762 aa29.49■■■□□ 2.31
SH2B1-209ENST00000563674 WDR63Q8IWG1 891 aa29.49■■■□□ 2.31
SH2B1-209ENST00000563674 MPNDQ8N594 471 aa29.49■■■□□ 2.31
SH2B1-209ENST00000563674 CCDC191Q8NCU4 936 aa29.49■■■□□ 2.31
SH2B1-209ENST00000563674 HACL1Q9UJ83 578 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms