RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 IL1RAPL2Q9NP60 686 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
TCF4-211ENST00000561992 ACEP12821 1306 aa11.72□□□□□ -0.53
TCF4-211ENST00000561992 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 CTAGE5O15320 804 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.53
TCF4-211ENST00000561992 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
TCF4-211ENST00000561992 CCDC186Q7Z3E2 898 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
TCF4-211ENST00000561992 VPS37CA5D8V6 355 aaPredicted RBP11.71□□□□□ -0.54
TCF4-211ENST00000561992 TUBB4AP04350 444 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 TNNT1P13805 278 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.54
TCF4-211ENST00000561992 CLASRPQ8N2M8 674 aaKnown RBP11.71□□□□□ -0.54
TCF4-211ENST00000561992 SPC24Q8NBT2 197 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 MIS18AQ9NYP9 233 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 TCHHQ07283 1943 aa11.71□□□□□ -0.54
TCF4-211ENST00000561992 SRGAP3O43295 1099 aa11.7□□□□□ -0.54
TCF4-211ENST00000561992 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.54
TCF4-211ENST00000561992 CWC27Q6UX04 472 aaKnown RBP11.7□□□□□ -0.54
TCF4-211ENST00000561992 MPNDQ8N594 471 aa11.7□□□□□ -0.54
TCF4-211ENST00000561992 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
TCF4-211ENST00000561992 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
TCF4-211ENST00000561992 LARGE1O95461 756 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 ME3Q16798 604 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 TSGA10IPQ3SY00 556 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 DRC7Q8IY82 874 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 ZNF397Q8NF99 534 aaPredicted RBP11.69□□□□□ -0.54
TCF4-211ENST00000561992 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
TCF4-211ENST00000561992 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 ANO6Q4KMQ2 910 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
TCF4-211ENST00000561992 CEP170BQ9Y4F5 1589 aaPredicted RBP11.68□□□□□ -0.54
TCF4-211ENST00000561992 FOXO3O43524 673 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 RAD21O60216 631 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 HDGFL1Q5TGJ6 251 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 ATL3Q6DD88 541 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 ZSCAN16Q9H4T2 348 aaPredicted RBP11.68□□□□□ -0.54
TCF4-211ENST00000561992 USP54Q70EL1 1684 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 CCDC66A2RUB6 948 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 LIG1P18858 919 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 ZNF165P49910 485 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 ST3GAL1Q11201 340 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 KRT32Q14532 448 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 TPD52L1Q16890 204 aaPredicted RBP11.68□□□□□ -0.54
TCF4-211ENST00000561992 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 CREB3L3Q68CJ9 461 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 PRPF40BQ6NWY9 871 aaKnown RBP11.68□□□□□ -0.54
TCF4-211ENST00000561992 LUZP1Q86V48 1076 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 LEO1Q8WVC0 666 aaPredicted RBP11.68□□□□□ -0.54
TCF4-211ENST00000561992 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 EYA1Q99502 592 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 DACT1Q9NYF0 836 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 CFAP45Q9UL16 551 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 JCADQ9P266 1359 aa11.68□□□□□ -0.54
TCF4-211ENST00000561992 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 ALDH1L1O75891 902 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 BEND3Q5T5X7 828 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 KRT222Q8N1A0 295 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 KIF18AQ8NI77 898 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 FAM53CQ9NYF3 392 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 NCKAP5LQ9HCH0 1330 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
TCF4-211ENST00000561992 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 BLOC1S2Q6QNY1 142 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 DNAAF4Q8WXU2 420 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
TCF4-211ENST00000561992 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
TCF4-211ENST00000561992 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 KCNJ6P48051 423 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 GSDMDP57764 484 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 PTH1RQ03431 593 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
TCF4-211ENST00000561992 RIMS1Q86UR5 1692 aaKnown RBP11.66□□□□□ -0.54
TCF4-211ENST00000561992 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
TCF4-211ENST00000561992 C16orf45Q96MC5 204 aaPredicted RBP11.66□□□□□ -0.54
TCF4-211ENST00000561992 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
TCF4-211ENST00000561992 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 FAM177BA6PVY3 158 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 MAP4K4O95819 1239 aaPredicted RBP11.65□□□□□ -0.54
TCF4-211ENST00000561992 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
TCF4-211ENST00000561992 STX1AQ16623 288 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 CDC37L1Q7L3B6 337 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 LRRC8AQ8IWT6 810 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 SLC27A2O14975 620 aa11.65□□□□□ -0.54
TCF4-211ENST00000561992 AMPHP49418 695 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms