RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.5
SMG1-205ENST00000561947 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
SMG1-205ENST00000561947 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
SMG1-205ENST00000561947 LRP6O75581 1613 aa11.9□□□□□ -0.51
SMG1-205ENST00000561947 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
SMG1-205ENST00000561947 TRAK2O60296 914 aa11.89□□□□□ -0.51
SMG1-205ENST00000561947 NUCB2P80303 420 aa11.89□□□□□ -0.51
SMG1-205ENST00000561947 KIAA1211Q6ZU35 1233 aa11.89□□□□□ -0.51
SMG1-205ENST00000561947 FOXO4P98177 505 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 CLEC17AQ6ZS10 378 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 PIGBQ92521 554 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 HIP1O00291 1037 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
SMG1-205ENST00000561947 PTMSP20962 102 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 CCDC191Q8NCU4 936 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 TMX3Q96JJ7 454 aa11.88□□□□□ -0.51
SMG1-205ENST00000561947 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
SMG1-205ENST00000561947 TNNI3KQ59H18 835 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 LMBR1LQ6UX01 489 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 ZGPATQ8N5A5 531 aaKnown RBP11.87□□□□□ -0.51
SMG1-205ENST00000561947 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 FPGT-TNNI3KV9GXZ4 949 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.87□□□□□ -0.51
SMG1-205ENST00000561947 TFCP2Q12800 502 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 SNX14Q9Y5W7 946 aa11.87□□□□□ -0.51
SMG1-205ENST00000561947 CUL4AQ13619 759 aa11.86□□□□□ -0.51
SMG1-205ENST00000561947 DNAJC10Q8IXB1 793 aa11.86□□□□□ -0.51
SMG1-205ENST00000561947 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
SMG1-205ENST00000561947 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
SMG1-205ENST00000561947 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
SMG1-205ENST00000561947 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
SMG1-205ENST00000561947 BCL9O00512 1426 aa11.86□□□□□ -0.51
SMG1-205ENST00000561947 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
SMG1-205ENST00000561947 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
SMG1-205ENST00000561947 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
SMG1-205ENST00000561947 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
SMG1-205ENST00000561947 ATP5JP18859 108 aa11.85□□□□□ -0.51
SMG1-205ENST00000561947 NMIQ13287 307 aaPredicted RBP11.85□□□□□ -0.51
SMG1-205ENST00000561947 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
SMG1-205ENST00000561947 PHLPP1O60346 1717 aa11.85□□□□□ -0.51
SMG1-205ENST00000561947 STARD3NLO95772 234 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 PTH1RQ03431 593 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
SMG1-205ENST00000561947 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 GOLGA6L22H0YM25 854 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 EXOC5O00471 708 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 PKP1Q13835 747 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 KCNB2Q92953 911 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 FAM227BQ96M60 508 aa11.84□□□□□ -0.51
SMG1-205ENST00000561947 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.51
SMG1-205ENST00000561947 NOL8Q76FK4 1167 aaKnown RBP11.83□□□□□ -0.51
SMG1-205ENST00000561947 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.51
SMG1-205ENST00000561947 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 TRIM28Q13263 835 aaKnown RBP11.83□□□□□ -0.52
SMG1-205ENST00000561947 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 TTC14Q96N46 770 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
SMG1-205ENST00000561947 RFX7Q2KHR2 1363 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 MED23Q9ULK4 1368 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 DBNDD2Q9BQY9 259 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
SMG1-205ENST00000561947 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
SMG1-205ENST00000561947 IL15P40933 162 aaPredicted RBP11.82□□□□□ -0.52
SMG1-205ENST00000561947 ZDHHC9Q9Y397 364 aa11.82□□□□□ -0.52
SMG1-205ENST00000561947 MAP3K15Q6ZN16 1313 aa11.82□□□□□ -0.52
SMG1-205ENST00000561947 NECTIN1Q15223 517 aa11.82□□□□□ -0.52
SMG1-205ENST00000561947 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
SMG1-205ENST00000561947 CDCA7Q9BWT1 371 aaPredicted RBP11.82□□□□□ -0.52
SMG1-205ENST00000561947 EYA2O00167 538 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 CIAO1O76071 339 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 L1TD1Q5T7N2 865 aaKnown RBP11.81□□□□□ -0.52
SMG1-205ENST00000561947 MAP4K1Q92918 833 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 HAUS7Q99871 368 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 TM6SF1Q9BZW5 370 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
SMG1-205ENST00000561947 JCADQ9P266 1359 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 ZNF609O15014 1411 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
SMG1-205ENST00000561947 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
SMG1-205ENST00000561947 AK2P54819 239 aa11.81□□□□□ -0.52
SMG1-205ENST00000561947 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
SMG1-205ENST00000561947 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
SMG1-205ENST00000561947 CASTP20810 708 aaKnown RBP11.8□□□□□ -0.52
SMG1-205ENST00000561947 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
SMG1-205ENST00000561947 GIGYF2Q6Y7W6 1299 aaKnown RBP11.8□□□□□ -0.52
SMG1-205ENST00000561947 PLA2G12BQ9BX93 195 aa11.8□□□□□ -0.52
SMG1-205ENST00000561947 SPATA31A1Q5TZJ5 1347 aa11.8□□□□□ -0.52
SMG1-205ENST00000561947 NUP98P52948 1817 aa11.8□□□□□ -0.52
SMG1-205ENST00000561947 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
SMG1-205ENST00000561947 LRRC24Q50LG9 513 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms