RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 IDH3AP50213 366 aa11.29□□□□□ -0.6
SMG1-204ENST00000561940 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
SMG1-204ENST00000561940 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
SMG1-204ENST00000561940 USP20Q9Y2K6 914 aa11.29□□□□□ -0.6
SMG1-204ENST00000561940 MICAL2O94851 1124 aa11.28□□□□□ -0.6
SMG1-204ENST00000561940 FAM26DQ5JW98 314 aa11.28□□□□□ -0.6
SMG1-204ENST00000561940 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
SMG1-204ENST00000561940 GALNT6Q8NCL4 622 aa11.28□□□□□ -0.6
SMG1-204ENST00000561940 KLF15Q9UIH9 416 aa11.28□□□□□ -0.6
SMG1-204ENST00000561940 FAM181BA6NEQ2 426 aa11.27□□□□□ -0.61
SMG1-204ENST00000561940 TREML1Q86YW5 311 aa11.27□□□□□ -0.61
SMG1-204ENST00000561940 COL26A1Q96A83 441 aa11.27□□□□□ -0.61
SMG1-204ENST00000561940 ADAMTS8Q9UP79 889 aa11.27□□□□□ -0.61
SMG1-204ENST00000561940 ARHGEF15O94989 841 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 BRD1O95696 1058 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 SPEM2Q0P670 501 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 IER5Q5VY09 327 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 ETFBKMTQ8IXQ9 262 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
SMG1-204ENST00000561940 OIP5O43482 229 aa11.25□□□□□ -0.61
SMG1-204ENST00000561940 ARAFP10398 606 aa11.25□□□□□ -0.61
SMG1-204ENST00000561940 INPP5BP32019 993 aa11.25□□□□□ -0.61
SMG1-204ENST00000561940 SYT9Q86SS6 491 aa11.25□□□□□ -0.61
SMG1-204ENST00000561940 GOLGA6L1Q8N7Z2 621 aa11.25□□□□□ -0.61
SMG1-204ENST00000561940 EDARADDQ8WWZ3 215 aa11.25□□□□□ -0.61
SMG1-204ENST00000561940 SHISA8B8ZZ34 492 aa11.24□□□□□ -0.61
SMG1-204ENST00000561940 TNFRSF10BO14763 440 aa11.24□□□□□ -0.61
SMG1-204ENST00000561940 OPLAHO14841 1288 aa11.24□□□□□ -0.61
SMG1-204ENST00000561940 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
SMG1-204ENST00000561940 GRNP28799 593 aaKnown RBP11.24□□□□□ -0.61
SMG1-204ENST00000561940 BHMTQ93088 406 aa11.24□□□□□ -0.61
SMG1-204ENST00000561940 GDF2Q9UK05 429 aaPredicted RBP11.24□□□□□ -0.61
SMG1-204ENST00000561940 KCNQ4P56696 695 aa11.23□□□□□ -0.61
SMG1-204ENST00000561940 ZNF468Q5VIY5 522 aaPredicted RBP11.23□□□□□ -0.61
SMG1-204ENST00000561940 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
SMG1-204ENST00000561940 ZBTB39O15060 712 aa11.22□□□□□ -0.61
SMG1-204ENST00000561940 ADH6P28332 368 aa11.22□□□□□ -0.61
SMG1-204ENST00000561940 ARSDP51689 593 aa11.22□□□□□ -0.61
SMG1-204ENST00000561940 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
SMG1-204ENST00000561940 CMTR1Q8N1G2 835 aaKnown RBP11.22□□□□□ -0.61
SMG1-204ENST00000561940 GZF1Q9H116 711 aaPredicted RBP11.22□□□□□ -0.61
SMG1-204ENST00000561940 IGFLR1Q9H665 355 aa11.22□□□□□ -0.61
SMG1-204ENST00000561940 ENAMQ9NRM1 1142 aa11.22□□□□□ -0.61
SMG1-204ENST00000561940 KCNA1Q09470 495 aa11.21□□□□□ -0.61
SMG1-204ENST00000561940 MTMR3Q13615 1198 aa11.21□□□□□ -0.61
SMG1-204ENST00000561940 KRT25Q7Z3Z0 450 aa11.21□□□□□ -0.61
SMG1-204ENST00000561940 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
SMG1-204ENST00000561940 STIM2Q9P246 746 aa11.21□□□□□ -0.61
SMG1-204ENST00000561940 MARSP56192 900 aaKnown RBP11.2□□□□□ -0.62
SMG1-204ENST00000561940 TBC1D8BQ0IIM8 1120 aa11.2□□□□□ -0.62
SMG1-204ENST00000561940 SLCO4C1Q6ZQN7 724 aa11.2□□□□□ -0.62
SMG1-204ENST00000561940 GSX2Q9BZM3 304 aa11.2□□□□□ -0.62
SMG1-204ENST00000561940 RTCBQ9Y3I0 505 aaKnown RBP11.2□□□□□ -0.62
SMG1-204ENST00000561940 EPB42P16452 691 aa11.19□□□□□ -0.62
SMG1-204ENST00000561940 AMPD1P23109 780 aa11.19□□□□□ -0.62
SMG1-204ENST00000561940 PNMA5Q96PV4 448 aa11.19□□□□□ -0.62
SMG1-204ENST00000561940 ANO2Q9NQ90 1003 aa11.19□□□□□ -0.62
SMG1-204ENST00000561940 ABL1P00519 1130 aa11.18□□□□□ -0.62
SMG1-204ENST00000561940 EPXP11678 715 aa11.18□□□□□ -0.62
SMG1-204ENST00000561940 NEUROD1Q13562 356 aa11.18□□□□□ -0.62
SMG1-204ENST00000561940 CCINQ13939 588 aa11.18□□□□□ -0.62
SMG1-204ENST00000561940 RRAGCQ9HB90 399 aa11.18□□□□□ -0.62
SMG1-204ENST00000561940 AVENQ9NQS1 362 aaPredicted RBP11.18□□□□□ -0.62
SMG1-204ENST00000561940 IVNS1ABPQ9Y6Y0 642 aa11.18□□□□□ -0.62
SMG1-204ENST00000561940 SASH3O75995 380 aa11.17□□□□□ -0.62
SMG1-204ENST00000561940 NFKB1P19838 968 aa11.17□□□□□ -0.62
SMG1-204ENST00000561940 TARSP26639 723 aaKnown RBP11.17□□□□□ -0.62
SMG1-204ENST00000561940 ATCAYQ86WG3 371 aa11.17□□□□□ -0.62
SMG1-204ENST00000561940 BTBD6Q96KE9 485 aa11.17□□□□□ -0.62
SMG1-204ENST00000561940 ZAP70P43403 619 aa11.16□□□□□ -0.62
SMG1-204ENST00000561940 GPR152Q8TDT2 470 aa11.16□□□□□ -0.62
SMG1-204ENST00000561940 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
SMG1-204ENST00000561940 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.62
SMG1-204ENST00000561940 SIN3BO75182 1162 aa11.15□□□□□ -0.62
SMG1-204ENST00000561940 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
SMG1-204ENST00000561940 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
SMG1-204ENST00000561940 XYLBO75191 536 aa11.14□□□□□ -0.63
SMG1-204ENST00000561940 SNRPNP63162 240 aaKnown RBP11.14□□□□□ -0.63
SMG1-204ENST00000561940 ZNF211Q13398 564 aaPredicted RBP11.14□□□□□ -0.63
SMG1-204ENST00000561940 UBE2OQ9C0C9 1292 aaKnown RBP11.14□□□□□ -0.63
SMG1-204ENST00000561940 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
SMG1-204ENST00000561940 KCNMB2Q9Y691 235 aa11.14□□□□□ -0.63
SMG1-204ENST00000561940 MPSTP25325 297 aa11.13□□□□□ -0.63
SMG1-204ENST00000561940 CHSY3Q70JA7 882 aa11.13□□□□□ -0.63
SMG1-204ENST00000561940 ABTB2Q8N961 1025 aa11.13□□□□□ -0.63
SMG1-204ENST00000561940 ZFATQ9P243 1243 aa11.13□□□□□ -0.63
SMG1-204ENST00000561940 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
SMG1-204ENST00000561940 ELOA3DA6NLF2 546 aaPredicted RBP11.12□□□□□ -0.63
SMG1-204ENST00000561940 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
SMG1-204ENST00000561940 ALAS2P22557 587 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 SERPINB4P48594 390 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 ELOA3BQ3SY89 546 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 TMCO4Q5TGY1 634 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 B4GALNT3Q6L9W6 998 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 ELOA3Q8NG57 546 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 MTMR7Q9Y216 660 aa11.12□□□□□ -0.63
SMG1-204ENST00000561940 ADH7P40394 386 aa11.11□□□□□ -0.63
SMG1-204ENST00000561940 AAMPQ13685 434 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms