RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 CCDC125Q86Z20 511 aa16.1■□□□□ 0.17
COTL1-202ENST00000561707 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
COTL1-202ENST00000561707 BCORQ6W2J9 1755 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 ADRA2BP18089 450 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
COTL1-202ENST00000561707 SSFA2P28290 1259 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 EPHA10Q5JZY3 1008 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 SUSD4Q5VX71 490 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
COTL1-202ENST00000561707 ANKRD44Q8N8A2 993 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
COTL1-202ENST00000561707 NIP7Q9Y221 180 aaKnown RBP eCLIP16.09■□□□□ 0.17
COTL1-202ENST00000561707 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
COTL1-202ENST00000561707 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
COTL1-202ENST00000561707 ATP8B2P98198 1209 aa16.08■□□□□ 0.16
COTL1-202ENST00000561707 UPF1Q92900 1129 aaKnown RBP eCLIP16.08■□□□□ 0.164e-32■□□□□ 9.2
COTL1-202ENST00000561707 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
COTL1-202ENST00000561707 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
COTL1-202ENST00000561707 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
COTL1-202ENST00000561707 USP42Q9H9J4 1324 aaKnown RBP16.08■□□□□ 0.16
COTL1-202ENST00000561707 MSH5O43196 834 aa16.07■□□□□ 0.16
COTL1-202ENST00000561707 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
COTL1-202ENST00000561707 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
COTL1-202ENST00000561707 EP400Q96L91 3159 aa16.07■□□□□ 0.16
COTL1-202ENST00000561707 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
COTL1-202ENST00000561707 PNMA6EA0A0J9YXQ4 647 aa16.06■□□□□ 0.16
COTL1-202ENST00000561707 PCCAP05165 728 aaPredicted RBP16.06■□□□□ 0.16
COTL1-202ENST00000561707 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
COTL1-202ENST00000561707 SLC15A2Q16348 729 aa16.06■□□□□ 0.16
COTL1-202ENST00000561707 STK32BQ9NY57 414 aa16.06■□□□□ 0.16
COTL1-202ENST00000561707 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
COTL1-202ENST00000561707 GYS1P13807 737 aa16.05■□□□□ 0.16
COTL1-202ENST00000561707 FOXO4P98177 505 aa16.05■□□□□ 0.16
COTL1-202ENST00000561707 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
COTL1-202ENST00000561707 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
COTL1-202ENST00000561707 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
COTL1-202ENST00000561707 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
COTL1-202ENST00000561707 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
COTL1-202ENST00000561707 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
COTL1-202ENST00000561707 RGL2O15211 777 aa16.04■□□□□ 0.16
COTL1-202ENST00000561707 NFIXQ14938 502 aa16.04■□□□□ 0.16
COTL1-202ENST00000561707 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
COTL1-202ENST00000561707 SETDB2Q96T68 719 aa16.04■□□□□ 0.16
COTL1-202ENST00000561707 HDAC5Q9UQL6 1122 aa16.04■□□□□ 0.16
COTL1-202ENST00000561707 CENPQQ7L2Z9 268 aaPredicted RBP16.03■□□□□ 0.16
COTL1-202ENST00000561707 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
COTL1-202ENST00000561707 IRS4O14654 1257 aaPredicted RBP16.02■□□□□ 0.16
COTL1-202ENST00000561707 NTSR2O95665 410 aa16.02■□□□□ 0.16
COTL1-202ENST00000561707 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
COTL1-202ENST00000561707 TM4SF1P30408 202 aa16.02■□□□□ 0.16
COTL1-202ENST00000561707 POLA2Q14181 598 aa16.02■□□□□ 0.16
COTL1-202ENST00000561707 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
COTL1-202ENST00000561707 FLAD1Q8NFF5 587 aa16.02■□□□□ 0.16
COTL1-202ENST00000561707 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
COTL1-202ENST00000561707 ERFEQ4G0M1 354 aa16.01■□□□□ 0.15
COTL1-202ENST00000561707 SKAP1Q86WV1 359 aa16.01■□□□□ 0.15
COTL1-202ENST00000561707 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
COTL1-202ENST00000561707 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
COTL1-202ENST00000561707 PDGFDQ9GZP0 370 aaPredicted RBP16.01■□□□□ 0.15
COTL1-202ENST00000561707 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
COTL1-202ENST00000561707 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
COTL1-202ENST00000561707 CDHR2Q9BYE9 1310 aa16■□□□□ 0.15
COTL1-202ENST00000561707 MTX1Q13505 466 aa16■□□□□ 0.15
COTL1-202ENST00000561707 CCDC85AQ96PX6 553 aaPredicted RBP16■□□□□ 0.15
COTL1-202ENST00000561707 PLA2G12BQ9BX93 195 aa16■□□□□ 0.15
COTL1-202ENST00000561707 HMMRO75330 724 aa15.99■□□□□ 0.15
COTL1-202ENST00000561707 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
COTL1-202ENST00000561707 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
COTL1-202ENST00000561707 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
COTL1-202ENST00000561707 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
COTL1-202ENST00000561707 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
COTL1-202ENST00000561707 PA2G4Q9UQ80 394 aaKnown RBP15.99■□□□□ 0.15
COTL1-202ENST00000561707 CHMP3Q9Y3E7 222 aa15.99■□□□□ 0.15
COTL1-202ENST00000561707 APBB1O00213 710 aa15.98■□□□□ 0.15
COTL1-202ENST00000561707 PDE8AO60658 829 aa15.98■□□□□ 0.15
COTL1-202ENST00000561707 CSF1RP07333 972 aa15.98■□□□□ 0.15
COTL1-202ENST00000561707 DDR1Q08345 913 aa15.98■□□□□ 0.15
COTL1-202ENST00000561707 KLHDC4Q8TBB5 520 aa15.98■□□□□ 0.15
COTL1-202ENST00000561707 SERPINB2P05120 415 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
COTL1-202ENST00000561707 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
COTL1-202ENST00000561707 SLC10A5Q5PT55 438 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 ANKRD45Q5TZF3 282 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 TPTE2Q6XPS3 522 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 TTLL11Q8NHH1 800 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 EXOC6BQ9Y2D4 811 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 MYH3P11055 1940 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 QSER1Q2KHR3 1735 aa15.97■□□□□ 0.15
COTL1-202ENST00000561707 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
COTL1-202ENST00000561707 SURF6O75683 361 aaKnown RBP15.96■□□□□ 0.15
COTL1-202ENST00000561707 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
COTL1-202ENST00000561707 POLRMTO00411 1230 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms