RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 PSMD1Q99460 953 aa14.11□□□□□ -0.15
TPM1-227ENST00000560970 MKRN1Q9UHC7 482 aaKnown RBP14.11□□□□□ -0.15
TPM1-227ENST00000560970 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
TPM1-227ENST00000560970 RNF123Q5XPI4 1314 aa14.11□□□□□ -0.15
TPM1-227ENST00000560970 ANP32CO43423 234 aa14.1□□□□□ -0.15
TPM1-227ENST00000560970 EIF4A1P60842 406 aaKnown RBP14.1□□□□□ -0.15
TPM1-227ENST00000560970 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
TPM1-227ENST00000560970 CCDC146Q8IYE0 955 aa14.1□□□□□ -0.15
TPM1-227ENST00000560970 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
TPM1-227ENST00000560970 DUOX1Q9NRD9 1551 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 FZD9O00144 591 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 MYL6BP14649 208 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 EPHX2P34913 555 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 WDR43Q15061 677 aaKnown RBP eCLIP14.09□□□□□ -0.15
TPM1-227ENST00000560970 EAPPQ56P03 285 aaPredicted RBP14.09□□□□□ -0.15
TPM1-227ENST00000560970 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 TTLL7Q6ZT98 887 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 GPC2Q8N158 579 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 THUMPD2Q9BTF0 503 aaKnown RBP14.09□□□□□ -0.15
TPM1-227ENST00000560970 ZBTB3Q9H5J0 574 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 ADAMTS8Q9UP79 889 aa14.09□□□□□ -0.15
TPM1-227ENST00000560970 CAPN15O75808 1086 aa14.08□□□□□ -0.16
TPM1-227ENST00000560970 NTSR2O95665 410 aa14.08□□□□□ -0.16
TPM1-227ENST00000560970 GPTP24298 496 aa14.08□□□□□ -0.16
TPM1-227ENST00000560970 PNMA8AQ86V59 439 aaPredicted RBP14.08□□□□□ -0.16
TPM1-227ENST00000560970 SYNE4Q8N205 404 aa14.08□□□□□ -0.16
TPM1-227ENST00000560970 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
TPM1-227ENST00000560970 PSME4Q14997 1843 aa14.08□□□□□ -0.16
TPM1-227ENST00000560970 TMEM88BA6NKF7 163 aa14.07□□□□□ -0.16
TPM1-227ENST00000560970 PPEF1O14829 653 aaPredicted RBP14.07□□□□□ -0.16
TPM1-227ENST00000560970 GRIPAP1Q4V328 841 aa14.07□□□□□ -0.16
TPM1-227ENST00000560970 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
TPM1-227ENST00000560970 RRP7AQ9Y3A4 280 aaKnown RBP14.07□□□□□ -0.16
TPM1-227ENST00000560970 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
TPM1-227ENST00000560970 TSPYL4Q9UJ04 414 aa14.06□□□□□ -0.16
TPM1-227ENST00000560970 SPEF2Q9C093 1822 aa14.06□□□□□ -0.16
TPM1-227ENST00000560970 MYH3P11055 1940 aa14.05□□□□□ -0.16
TPM1-227ENST00000560970 ITGBL1O95965 494 aaPredicted RBP14.05□□□□□ -0.16
TPM1-227ENST00000560970 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
TPM1-227ENST00000560970 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
TPM1-227ENST00000560970 EIF6P56537 245 aaKnown RBP14.05□□□□□ -0.16
TPM1-227ENST00000560970 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
TPM1-227ENST00000560970 SUSD4Q5VX71 490 aa14.05□□□□□ -0.16
TPM1-227ENST00000560970 GIGYF2Q6Y7W6 1299 aaKnown RBP14.05□□□□□ -0.16
TPM1-227ENST00000560970 ZNF34Q8IZ26 560 aa14.05□□□□□ -0.16
TPM1-227ENST00000560970 RBM17Q96I25 401 aaKnown RBP14.05□□□□□ -0.16
TPM1-227ENST00000560970 CRAMP1Q96RY5 1269 aa14.05□□□□□ -0.16
TPM1-227ENST00000560970 PPP1R42Q7Z4L9 355 aa14.04□□□□□ -0.16
TPM1-227ENST00000560970 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
TPM1-227ENST00000560970 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
TPM1-227ENST00000560970 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
TPM1-227ENST00000560970 FOXN1O15353 648 aa14.03□□□□□ -0.16
TPM1-227ENST00000560970 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
TPM1-227ENST00000560970 LRP10Q7Z4F1 713 aa14.03□□□□□ -0.16
TPM1-227ENST00000560970 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
TPM1-227ENST00000560970 MRS2Q9HD23 443 aa14.03□□□□□ -0.16
TPM1-227ENST00000560970 GJA3Q9Y6H8 435 aa14.03□□□□□ -0.16
TPM1-227ENST00000560970 ABCC4O15439 1325 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 VEGFBP49765 207 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 SCNN1DP51172 638 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 RIPK4P57078 832 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 MAP1SQ66K74 1059 aaPredicted RBP14.02□□□□□ -0.17
TPM1-227ENST00000560970 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 SLC51AQ86UW1 340 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 NIM1KQ8IY84 436 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
TPM1-227ENST00000560970 COL4A1P02462 1669 aa14.01□□□□□ -0.17
TPM1-227ENST00000560970 PPIP5K2O43314 1243 aa14.01□□□□□ -0.17
TPM1-227ENST00000560970 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
TPM1-227ENST00000560970 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
TPM1-227ENST00000560970 TMX4Q9H1E5 349 aaPredicted RBP14.01□□□□□ -0.17
TPM1-227ENST00000560970 PRDM10Q9NQV6 1147 aa14.01□□□□□ -0.17
TPM1-227ENST00000560970 CDHR2Q9BYE9 1310 aa14□□□□□ -0.17
TPM1-227ENST00000560970 CTCFP49711 727 aaPredicted RBP14□□□□□ -0.17
TPM1-227ENST00000560970 PDIA6Q15084 440 aa14□□□□□ -0.17
TPM1-227ENST00000560970 NEUROD2Q15784 382 aa14□□□□□ -0.17
TPM1-227ENST00000560970 HSP90AB3PQ58FF7 597 aa14□□□□□ -0.17
TPM1-227ENST00000560970 NLRP3Q96P20 1036 aa14□□□□□ -0.17
TPM1-227ENST00000560970 ABT1Q9ULW3 272 aaKnown RBP14□□□□□ -0.17
TPM1-227ENST00000560970 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
TPM1-227ENST00000560970 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
TPM1-227ENST00000560970 ANXA1P04083 346 aa13.99□□□□□ -0.17
TPM1-227ENST00000560970 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
TPM1-227ENST00000560970 AOC3Q16853 763 aa13.99□□□□□ -0.17
TPM1-227ENST00000560970 SUPT20HQ8NEM7 779 aa13.99□□□□□ -0.17
TPM1-227ENST00000560970 DDX21Q9NR30 783 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM1-227ENST00000560970 SCN9AQ15858 1988 aa13.99□□□□□ -0.17
TPM1-227ENST00000560970 ZNF646O15015 1829 aaPredicted RBP13.99□□□□□ -0.17
TPM1-227ENST00000560970 APAF1O14727 1248 aa13.98□□□□□ -0.17
TPM1-227ENST00000560970 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
TPM1-227ENST00000560970 USP50Q70EL3 339 aaPredicted RBP13.98□□□□□ -0.17
TPM1-227ENST00000560970 VPS33BQ9H267 617 aa13.98□□□□□ -0.17
TPM1-227ENST00000560970 WDR33Q9C0J8 1336 aaKnown RBP13.97□□□□□ -0.17
TPM1-227ENST00000560970 POLR2AP24928 1970 aaKnown RBP13.97□□□□□ -0.17
TPM1-227ENST00000560970 EPS15P42566 896 aa13.97□□□□□ -0.17
TPM1-227ENST00000560970 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
TPM1-227ENST00000560970 SLC10A5Q5PT55 438 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms