RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 POTECB2RU33 542 aa15.99■□□□□ 0.15
SPG11-219ENST00000559822 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
SPG11-219ENST00000559822 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
SPG11-219ENST00000559822 PSMD1Q99460 953 aa15.99■□□□□ 0.15
SPG11-219ENST00000559822 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
SPG11-219ENST00000559822 TMX4Q9H1E5 349 aaPredicted RBP15.99■□□□□ 0.15
SPG11-219ENST00000559822 ZNF277Q9NRM2 450 aaPredicted RBP15.99■□□□□ 0.15
SPG11-219ENST00000559822 TRIM35Q9UPQ4 493 aa15.99■□□□□ 0.15
SPG11-219ENST00000559822 DDNO94850 711 aaPredicted RBP15.98■□□□□ 0.15
SPG11-219ENST00000559822 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
SPG11-219ENST00000559822 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
SPG11-219ENST00000559822 COPS6Q7L5N1 327 aa15.98■□□□□ 0.15
SPG11-219ENST00000559822 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
SPG11-219ENST00000559822 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
SPG11-219ENST00000559822 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
SPG11-219ENST00000559822 SCN4AP35499 1836 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 ANXA1P04083 346 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
SPG11-219ENST00000559822 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
SPG11-219ENST00000559822 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 NECTIN2Q92692 538 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 ANKRD36CQ5JPF3 1778 aa15.97■□□□□ 0.15
SPG11-219ENST00000559822 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
SPG11-219ENST00000559822 SLC10A5Q5PT55 438 aa15.96■□□□□ 0.15
SPG11-219ENST00000559822 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
SPG11-219ENST00000559822 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
SPG11-219ENST00000559822 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
SPG11-219ENST00000559822 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
SPG11-219ENST00000559822 HTRA3P83110 453 aa15.95■□□□□ 0.14
SPG11-219ENST00000559822 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
SPG11-219ENST00000559822 DBF4Q9UBU7 674 aaPredicted RBP15.95■□□□□ 0.14
SPG11-219ENST00000559822 FZD9O00144 591 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 TCIRG1Q13488 830 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 KRT24Q2M2I5 525 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 LDHDQ86WU2 507 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 HACL1Q9UJ83 578 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
SPG11-219ENST00000559822 EIF6P56537 245 aaKnown RBP15.93■□□□□ 0.14
SPG11-219ENST00000559822 GPC2Q8N158 579 aa15.93■□□□□ 0.14
SPG11-219ENST00000559822 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
SPG11-219ENST00000559822 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
SPG11-219ENST00000559822 HYPKQ9NX55 129 aa15.93■□□□□ 0.14
SPG11-219ENST00000559822 TRMT112Q9UI30 125 aaKnown RBP15.93■□□□□ 0.14
SPG11-219ENST00000559822 SH3TC1Q8TE82 1336 aa15.93■□□□□ 0.14
SPG11-219ENST00000559822 APAF1O14727 1248 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 GNAI1P63096 354 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 DUSP27Q5VZP5 1158 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
SPG11-219ENST00000559822 LARGE2Q8N3Y3 721 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 PLBD2Q8NHP8 589 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 CHMP4AQ9BY43 222 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 IFT57Q9NWB7 429 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
SPG11-219ENST00000559822 BBOX1O75936 387 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 ANKRD13DQ6ZTN6 518 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 C3orf67Q6ZVT6 689 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 DDX46Q7L014 1031 aaKnown RBP15.91■□□□□ 0.14
SPG11-219ENST00000559822 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 VPS33BQ9H267 617 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 ABCC4O15439 1325 aa15.91■□□□□ 0.14
SPG11-219ENST00000559822 TCERG1O14776 1098 aaKnown RBP15.9■□□□□ 0.14
SPG11-219ENST00000559822 ZNF853P0CG23 659 aa15.9■□□□□ 0.14
SPG11-219ENST00000559822 HCLS1P14317 486 aaPredicted RBP15.9■□□□□ 0.14
SPG11-219ENST00000559822 EPHX2P34913 555 aa15.9■□□□□ 0.14
SPG11-219ENST00000559822 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
SPG11-219ENST00000559822 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
SPG11-219ENST00000559822 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
SPG11-219ENST00000559822 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
SPG11-219ENST00000559822 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
SPG11-219ENST00000559822 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
SPG11-219ENST00000559822 TMC4Q7Z404 712 aa15.89■□□□□ 0.13
SPG11-219ENST00000559822 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
SPG11-219ENST00000559822 LAMB2P55268 1798 aa15.88■□□□□ 0.13
SPG11-219ENST00000559822 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
SPG11-219ENST00000559822 SP8Q8IXZ3 490 aa15.88■□□□□ 0.13
SPG11-219ENST00000559822 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
SPG11-219ENST00000559822 GJA3Q9Y6H8 435 aa15.88■□□□□ 0.13
SPG11-219ENST00000559822 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
SPG11-219ENST00000559822 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
SPG11-219ENST00000559822 GRAPQ13588 217 aa15.87■□□□□ 0.13
SPG11-219ENST00000559822 DPP8Q6V1X1 898 aaPredicted RBP15.87■□□□□ 0.13
SPG11-219ENST00000559822 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
SPG11-219ENST00000559822 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
SPG11-219ENST00000559822 RTFDC1Q9BY42 306 aaPredicted RBP15.87■□□□□ 0.13
SPG11-219ENST00000559822 TRIM28Q13263 835 aaKnown RBP15.86■□□□□ 0.13
SPG11-219ENST00000559822 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
SPG11-219ENST00000559822 MPNDQ8N594 471 aa15.86■□□□□ 0.13
SPG11-219ENST00000559822 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
SPG11-219ENST00000559822 AOC3Q16853 763 aa15.85■□□□□ 0.13
SPG11-219ENST00000559822 COL4A5P29400 1685 aa15.85■□□□□ 0.13
SPG11-219ENST00000559822 ADAMTSL1Q8N6G6 1762 aa15.85■□□□□ 0.13
SPG11-219ENST00000559822 ATP5J2-PTCD1G3V325 749 aa15.84■□□□□ 0.13
SPG11-219ENST00000559822 DDX58O95786 925 aaKnown RBP15.84■□□□□ 0.13
SPG11-219ENST00000559822 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
SPG11-219ENST00000559822 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms