RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 LNPKQ9C0E8 428 aa17.83■□□□□ 0.44
RABGGTA-209ENST00000559551 RTL5Q5HYW3 569 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-209ENST00000559551 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
RABGGTA-209ENST00000559551 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
RABGGTA-209ENST00000559551 ZNF34Q8IZ26 560 aa17.82■□□□□ 0.44
RABGGTA-209ENST00000559551 EXOC6BQ9Y2D4 811 aa17.82■□□□□ 0.44
RABGGTA-209ENST00000559551 SRGAP3O43295 1099 aa17.81■□□□□ 0.44
RABGGTA-209ENST00000559551 HMMRO75330 724 aa17.81■□□□□ 0.44
RABGGTA-209ENST00000559551 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
RABGGTA-209ENST00000559551 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
RABGGTA-209ENST00000559551 TUBGCP6Q96RT7 1819 aa17.81■□□□□ 0.44
RABGGTA-209ENST00000559551 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
RABGGTA-209ENST00000559551 FOXO4P98177 505 aa17.8■□□□□ 0.44
RABGGTA-209ENST00000559551 RABL6Q3YEC7 729 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-209ENST00000559551 BCL2L12Q9HB09 334 aa17.8■□□□□ 0.44
RABGGTA-209ENST00000559551 GNPATO15228 680 aa17.79■□□□□ 0.44
RABGGTA-209ENST00000559551 SMARCA5O60264 1052 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-209ENST00000559551 DDX60Q8IY21 1712 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-209ENST00000559551 APBB1O00213 710 aa17.79■□□□□ 0.44
RABGGTA-209ENST00000559551 RGPD3A6NKT7 1758 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-209ENST00000559551 RGPD4Q7Z3J3 1758 aa17.79■□□□□ 0.44
RABGGTA-209ENST00000559551 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 FAM89AQ96GI7 184 aa17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 PA2G4Q9UQ80 394 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 RFX5P48382 616 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 TXNRD1Q16881 649 aa17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-209ENST00000559551 COL24A1Q17RW2 1714 aa17.77■□□□□ 0.44
RABGGTA-209ENST00000559551 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.44
RABGGTA-209ENST00000559551 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.44
RABGGTA-209ENST00000559551 OTUD7AQ8TE49 926 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-209ENST00000559551 LAMB2P55268 1798 aa17.77■□□□□ 0.43
RABGGTA-209ENST00000559551 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 PLSCR1O15162 318 aa17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 APBA3O96018 575 aa17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 SUSD4Q5VX71 490 aa17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 ZBTB38Q8NAP3 1195 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 KLHDC4Q8TBB5 520 aa17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 ARHGEF1Q92888 912 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
RABGGTA-209ENST00000559551 SURF6O75683 361 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-209ENST00000559551 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
RABGGTA-209ENST00000559551 RTCBQ9Y3I0 505 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-209ENST00000559551 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
RABGGTA-209ENST00000559551 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
RABGGTA-209ENST00000559551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-209ENST00000559551 CDHR2Q9BYE9 1310 aa17.74■□□□□ 0.43
RABGGTA-209ENST00000559551 MSH5O43196 834 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 PLA2G12BQ9BX93 195 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 PHF14O94880 888 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 PTPN12Q05209 780 aaKnown RBP17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 PLEKHM2Q8IWE5 1019 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 AK7Q96M32 723 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 SALL3Q9BXA9 1300 aa17.73■□□□□ 0.43
RABGGTA-209ENST00000559551 NTSR2O95665 410 aa17.72■□□□□ 0.43
RABGGTA-209ENST00000559551 TBC1D9BQ66K14 1250 aa17.72■□□□□ 0.43
RABGGTA-209ENST00000559551 TRMT112Q9UI30 125 aaKnown RBP17.72■□□□□ 0.43
RABGGTA-209ENST00000559551 ZNF827Q17R98 1081 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 USP42Q9H9J4 1324 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 FAM177BA6PVY3 158 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 SASH1O94885 1247 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 C8orf34Q49A92 452 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 IL1RAPL2Q9NP60 686 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 COPRSQ9NQ92 184 aa17.71■□□□□ 0.43
RABGGTA-209ENST00000559551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 RGL2O15211 777 aa17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 CSF1RP07333 972 aa17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 TAF1P21675 1872 aa17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 COL4A1P02462 1669 aa17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 TRAPPC3LQ5T215 181 aa17.7■□□□□ 0.42
RABGGTA-209ENST00000559551 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
RABGGTA-209ENST00000559551 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
RABGGTA-209ENST00000559551 SIL1Q9H173 461 aa17.69■□□□□ 0.42
RABGGTA-209ENST00000559551 ZNF652Q9Y2D9 606 aa17.69■□□□□ 0.42
RABGGTA-209ENST00000559551 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 ZNF594Q96JF6 807 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 BACH2Q9BYV9 841 aa17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 SPEF2Q9C093 1822 aa17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
RABGGTA-209ENST00000559551 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 ZPR1O75312 459 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 HCLS1P14317 486 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 ADRA2BP18089 450 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 CHMP3Q9Y3E7 222 aa17.67■□□□□ 0.42
RABGGTA-209ENST00000559551 GSPT1P15170 499 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms