RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 C1orf115Q9H7X2 142 aa20.55■□□□□ 0.88
TNFAIP2-205ENST00000559406 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
TNFAIP2-205ENST00000559406 ZNF652Q9Y2D9 606 aa20.55■□□□□ 0.88
TNFAIP2-205ENST00000559406 IBTKQ9P2D0 1353 aaPredicted RBP20.55■□□□□ 0.88
TNFAIP2-205ENST00000559406 RGL2O15211 777 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 CASP7P55210 303 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 SUSD4Q5VX71 490 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 SYNE4Q8N205 404 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 FLAD1Q8NFF5 587 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 CWC25Q9NXE8 425 aaPredicted RBP20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 GRM8O00222 908 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 UTYO14607 1347 aa20.54■□□□□ 0.88
TNFAIP2-205ENST00000559406 NFIXQ14938 502 aa20.53■□□□□ 0.88
TNFAIP2-205ENST00000559406 RTL5Q5HYW3 569 aaPredicted RBP20.53■□□□□ 0.88
TNFAIP2-205ENST00000559406 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
TNFAIP2-205ENST00000559406 H7C1W4 665 aa20.52■□□□□ 0.88
TNFAIP2-205ENST00000559406 DDX60Q8IY21 1712 aaKnown RBP20.52■□□□□ 0.88
TNFAIP2-205ENST00000559406 UBE3BQ7Z3V4 1068 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 KAZALD1Q96I82 304 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 C9orf78Q9NZ63 289 aaPredicted RBP20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 NTSR2O95665 410 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 TM4SF1P30408 202 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 MSL1Q68DK7 614 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 FAM89AQ96GI7 184 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 SUCLG2Q96I99 432 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 PCDHB15Q9Y5E8 787 aa20.51■□□□□ 0.87
TNFAIP2-205ENST00000559406 DDR1Q08345 913 aa20.5■□□□□ 0.87
TNFAIP2-205ENST00000559406 R3HDM1Q15032 1099 aaKnown RBP20.5■□□□□ 0.87
TNFAIP2-205ENST00000559406 UBTFL1P0CB47 393 aaPredicted RBP20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 EPHA10Q5JZY3 1008 aa20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 LRRFIP2Q9Y608 721 aaKnown RBP20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 LAMB2P55268 1798 aa20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 PCCAP05165 728 aaPredicted RBP20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 GNAI3P08754 354 aa20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 PARP10Q53GL7 1025 aa20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 ZBTB38Q8NAP3 1195 aaPredicted RBP20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
TNFAIP2-205ENST00000559406 NRXN2Q9P2S2 1712 aa20.48■□□□□ 0.87
TNFAIP2-205ENST00000559406 MYH3P11055 1940 aa20.48■□□□□ 0.87
TNFAIP2-205ENST00000559406 NUTM1Q86Y26 1132 aa20.48■□□□□ 0.87
TNFAIP2-205ENST00000559406 TRMT112Q9UI30 125 aaKnown RBP20.48■□□□□ 0.87
TNFAIP2-205ENST00000559406 PSDA5PKW4 1024 aaPredicted RBP20.47■□□□□ 0.87
TNFAIP2-205ENST00000559406 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 ABCC12Q96J65 1359 aa20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 GNAI2P04899 355 aa20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 SIRT2Q8IXJ6 389 aa20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 NLGN1Q8N2Q7 840 aa20.46■□□□□ 0.87
TNFAIP2-205ENST00000559406 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.87
TNFAIP2-205ENST00000559406 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
TNFAIP2-205ENST00000559406 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
TNFAIP2-205ENST00000559406 BICC1Q9H694 974 aaKnown RBP20.45■□□□□ 0.86
TNFAIP2-205ENST00000559406 FOXO4P98177 505 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 CEP85Q6P2H3 762 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 CDHR2Q9BYE9 1310 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 MMP10P09238 476 aa20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 CHMP4BQ9H444 224 aaKnown RBP20.44■□□□□ 0.86
TNFAIP2-205ENST00000559406 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
TNFAIP2-205ENST00000559406 SERPINB2P05120 415 aa20.43■□□□□ 0.86
TNFAIP2-205ENST00000559406 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
TNFAIP2-205ENST00000559406 PNMA6EA0A0J9YXQ4 647 aa20.42■□□□□ 0.86
TNFAIP2-205ENST00000559406 AAMPQ13685 434 aa20.42■□□□□ 0.86
TNFAIP2-205ENST00000559406 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
TNFAIP2-205ENST00000559406 ZBTB7AO95365 584 aa20.41■□□□□ 0.86
TNFAIP2-205ENST00000559406 PRR5LQ6MZQ0 368 aa20.41■□□□□ 0.86
TNFAIP2-205ENST00000559406 TAF1P21675 1872 aa20.41■□□□□ 0.86
TNFAIP2-205ENST00000559406 IGHDP01880 384 aa20.41■□□□□ 0.86
TNFAIP2-205ENST00000559406 PLA2G12BQ9BX93 195 aa20.41■□□□□ 0.86
TNFAIP2-205ENST00000559406 COL4A1P02462 1669 aa20.41■□□□□ 0.86
TNFAIP2-205ENST00000559406 RABL6Q3YEC7 729 aaPredicted RBP20.4■□□□□ 0.86
TNFAIP2-205ENST00000559406 B4GALNT3Q6L9W6 998 aa20.4■□□□□ 0.86
TNFAIP2-205ENST00000559406 SLC16A10Q8TF71 515 aa20.4■□□□□ 0.86
TNFAIP2-205ENST00000559406 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
TNFAIP2-205ENST00000559406 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
TNFAIP2-205ENST00000559406 TPTE2Q6XPS3 522 aa20.39■□□□□ 0.86
TNFAIP2-205ENST00000559406 ATP8B2P98198 1209 aa20.39■□□□□ 0.85
TNFAIP2-205ENST00000559406 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
TNFAIP2-205ENST00000559406 LMBR1LQ6UX01 489 aa20.39■□□□□ 0.85
TNFAIP2-205ENST00000559406 CNBD1Q8NA66 436 aa20.39■□□□□ 0.85
TNFAIP2-205ENST00000559406 MTX1Q13505 466 aa20.38■□□□□ 0.85
TNFAIP2-205ENST00000559406 CCDC85AQ96PX6 553 aaPredicted RBP20.38■□□□□ 0.85
TNFAIP2-205ENST00000559406 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
TNFAIP2-205ENST00000559406 PDE8AO60658 829 aa20.37■□□□□ 0.85
TNFAIP2-205ENST00000559406 CTSWP56202 376 aa20.37■□□□□ 0.85
TNFAIP2-205ENST00000559406 RPAP2Q8IXW5 612 aaPredicted RBP20.37■□□□□ 0.85
TNFAIP2-205ENST00000559406 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
TNFAIP2-205ENST00000559406 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
TNFAIP2-205ENST00000559406 CSF1RP07333 972 aa20.36■□□□□ 0.85
TNFAIP2-205ENST00000559406 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
TNFAIP2-205ENST00000559406 POLA2Q14181 598 aa20.36■□□□□ 0.85
TNFAIP2-205ENST00000559406 COL11A2P13942 1736 aaPredicted RBP20.35■□□□□ 0.85
TNFAIP2-205ENST00000559406 SRGAP3O43295 1099 aa20.35■□□□□ 0.85
TNFAIP2-205ENST00000559406 RFX5P48382 616 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms