RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SYTL4Q96C24 671 aaPredicted RBP12.79□□□□□ -0.36
TPM1-210ENST00000558264 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
TPM1-210ENST00000558264 SNX14Q9Y5W7 946 aa12.79□□□□□ -0.36
TPM1-210ENST00000558264 ARFGEF2Q9Y6D5 1785 aa12.79□□□□□ -0.36
TPM1-210ENST00000558264 AFDNP55196 1824 aaKnown RBP12.79□□□□□ -0.36
TPM1-210ENST00000558264 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
TPM1-210ENST00000558264 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
TPM1-210ENST00000558264 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
TPM1-210ENST00000558264 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 FOXD4L6Q3SYB3 417 aaPredicted RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 FOXD4L3Q6VB84 417 aaPredicted RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 PIGBQ92521 554 aa12.78□□□□□ -0.36
TPM1-210ENST00000558264 FSD1Q9BTV5 496 aa12.78□□□□□ -0.36
TPM1-210ENST00000558264 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
TPM1-210ENST00000558264 CASP7P55210 303 aa12.78□□□□□ -0.36
TPM1-210ENST00000558264 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 PRPF40BQ6NWY9 871 aaKnown RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
TPM1-210ENST00000558264 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
TPM1-210ENST00000558264 ANAPC15P60006 121 aa12.77□□□□□ -0.36
TPM1-210ENST00000558264 EVI5LQ96CN4 794 aa12.77□□□□□ -0.36
TPM1-210ENST00000558264 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
TPM1-210ENST00000558264 COL9A3Q14050 684 aaPredicted RBP12.77□□□□□ -0.37
TPM1-210ENST00000558264 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
TPM1-210ENST00000558264 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.37
TPM1-210ENST00000558264 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
TPM1-210ENST00000558264 SHANK3Q9BYB0 1731 aa12.77□□□□□ -0.37
TPM1-210ENST00000558264 FOXO4P98177 505 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 ADCK5Q3MIX3 580 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
TPM1-210ENST00000558264 CASTP20810 708 aaKnown RBP12.76□□□□□ -0.37
TPM1-210ENST00000558264 NUCB2P80303 420 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
TPM1-210ENST00000558264 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
TPM1-210ENST00000558264 KCNJ4P48050 445 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 GOLGA6L3A6NEY3 463 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
TPM1-210ENST00000558264 AK2P54819 239 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 RUFY2Q8WXA3 655 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 PANK2Q9BZ23 570 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 CWC22Q9HCG8 908 aaKnown RBP12.75□□□□□ -0.37
TPM1-210ENST00000558264 H7C1W4 665 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 LRRC24Q50LG9 513 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 SYNE4Q8N205 404 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 JAKMIP1Q96N16 626 aaKnown RBP12.75□□□□□ -0.37
TPM1-210ENST00000558264 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
TPM1-210ENST00000558264 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 TIMM10P62072 90 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 ZNF589Q86UQ0 364 aaPredicted RBP12.74□□□□□ -0.37
TPM1-210ENST00000558264 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
TPM1-210ENST00000558264 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 GPTP24298 496 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
TPM1-210ENST00000558264 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
TPM1-210ENST00000558264 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
TPM1-210ENST00000558264 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
TPM1-210ENST00000558264 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 LARGE1O95461 756 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 MCM2P49736 904 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 UBR2Q8IWV8 1755 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 PRPF40AO75400 957 aaKnown RBP12.73□□□□□ -0.37
TPM1-210ENST00000558264 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
TPM1-210ENST00000558264 CUL4AQ13619 759 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 SEC62Q99442 399 aaKnown RBP12.73□□□□□ -0.37
TPM1-210ENST00000558264 TNS2Q63HR2 1409 aa12.73□□□□□ -0.37
TPM1-210ENST00000558264 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
TPM1-210ENST00000558264 ATG9AQ7Z3C6 839 aa12.72□□□□□ -0.37
TPM1-210ENST00000558264 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
TPM1-210ENST00000558264 TTC14Q96N46 770 aa12.72□□□□□ -0.37
TPM1-210ENST00000558264 SLC4A9Q96Q91 983 aa12.72□□□□□ -0.37
TPM1-210ENST00000558264 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
TPM1-210ENST00000558264 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
TPM1-210ENST00000558264 HLFQ16534 295 aa12.71□□□□□ -0.37
TPM1-210ENST00000558264 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
TPM1-210ENST00000558264 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
TPM1-210ENST00000558264 CCDC191Q8NCU4 936 aa12.71□□□□□ -0.37
TPM1-210ENST00000558264 PAPPAQ13219 1627 aa12.71□□□□□ -0.38
TPM1-210ENST00000558264 FSD2A1L4K1 749 aa12.71□□□□□ -0.38
TPM1-210ENST00000558264 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.38
TPM1-210ENST00000558264 ATP5JP18859 108 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
TPM1-210ENST00000558264 NECTIN1Q15223 517 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 ACSBG1Q96GR2 724 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
TPM1-210ENST00000558264 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms