RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ALS2Q96Q42 1657 aa10.11□□□□□ -0.79
SPG11-209ENST00000558253 ADCY9O60503 1353 aa10.11□□□□□ -0.79
SPG11-209ENST00000558253 TMEM94Q12767 1356 aa10.11□□□□□ -0.79
SPG11-209ENST00000558253 TNS3Q68CZ2 1445 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 FSD2A1L4K1 749 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
SPG11-209ENST00000558253 PHKG2P15735 406 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 ZNF790Q6PG37 636 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
SPG11-209ENST00000558253 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
SPG11-209ENST00000558253 AXIN2Q9Y2T1 843 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 MAP3K2Q9Y2U5 619 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 COL15A1P39059 1388 aa10.1□□□□□ -0.79
SPG11-209ENST00000558253 NBPF7P0C2Y1 421 aaPredicted RBP10.09□□□□□ -0.79
SPG11-209ENST00000558253 KIAA1211Q6ZU35 1233 aa10.09□□□□□ -0.79
SPG11-209ENST00000558253 RILPL2Q969X0 211 aa10.09□□□□□ -0.79
SPG11-209ENST00000558253 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
SPG11-209ENST00000558253 SPATA31A3Q5VYP0 1347 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 C2orf72A6NCS6 295 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 GRM8O00222 908 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 KCNQ3O43525 872 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 CYP2E1P05181 493 aaPredicted RBP10.08□□□□□ -0.8
SPG11-209ENST00000558253 HSPA4P34932 840 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 OS9Q13438 667 aaPredicted RBP10.08□□□□□ -0.8
SPG11-209ENST00000558253 CUL4AQ13619 759 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 TTC5Q8N0Z6 440 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 PI4K2BQ8TCG2 481 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 FMNL2Q96PY5 1086 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 ECHDC1Q9NTX5 307 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 MRC1P22897 1456 aa10.08□□□□□ -0.8
SPG11-209ENST00000558253 CD2BP2O95400 341 aaKnown RBP10.07□□□□□ -0.8
SPG11-209ENST00000558253 IFIT2P09913 472 aaKnown RBP10.07□□□□□ -0.8
SPG11-209ENST00000558253 CSB-PGBD3P0DP91 1061 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 NEK4P51957 841 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 XPCQ01831 940 aaPredicted RBP10.07□□□□□ -0.8
SPG11-209ENST00000558253 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
SPG11-209ENST00000558253 KLHL40Q2TBA0 621 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 RIC3Q7Z5B4 369 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 EVI5LQ96CN4 794 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
SPG11-209ENST00000558253 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
SPG11-209ENST00000558253 SIPA1L3O60292 1781 aaPredicted RBP10.06□□□□□ -0.8
SPG11-209ENST00000558253 PXDNQ92626 1479 aa10.06□□□□□ -0.8
SPG11-209ENST00000558253 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
SPG11-209ENST00000558253 SGSM2O43147 1006 aa10.06□□□□□ -0.8
SPG11-209ENST00000558253 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
SPG11-209ENST00000558253 ZC3H6P61129 1189 aaKnown RBP10.06□□□□□ -0.8
SPG11-209ENST00000558253 METTL22Q9BUU2 404 aaPredicted RBP10.06□□□□□ -0.8
SPG11-209ENST00000558253 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
SPG11-209ENST00000558253 RAD50Q92878 1312 aa10.06□□□□□ -0.8
SPG11-209ENST00000558253 PDIA6Q15084 440 aa10.05□□□□□ -0.8
SPG11-209ENST00000558253 ANKRD13DQ6ZTN6 518 aa10.05□□□□□ -0.8
SPG11-209ENST00000558253 TM6SF1Q9BZW5 370 aa10.05□□□□□ -0.8
SPG11-209ENST00000558253 IL1RAPL2Q9NP60 686 aa10.05□□□□□ -0.8
SPG11-209ENST00000558253 SNRKQ9NRH2 765 aa10.05□□□□□ -0.8
SPG11-209ENST00000558253 DIAPH3Q9NSV4 1193 aa10.05□□□□□ -0.8
SPG11-209ENST00000558253 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 CABP4P57796 275 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 GCKRQ14397 625 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 FAM43AQ8N2R8 423 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 NFATC2IPQ8NCF5 419 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 KCNB2Q92953 911 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 TMX3Q96JJ7 454 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
SPG11-209ENST00000558253 KDM6AO15550 1401 aaPredicted RBP10.04□□□□□ -0.8
SPG11-209ENST00000558253 PCDH11XQ9BZA7 1347 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 PCDH11YQ9BZA8 1340 aa10.04□□□□□ -0.8
SPG11-209ENST00000558253 COL18A1P39060 1754 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 MBD3O95983 291 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 SSFA2P28290 1259 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 FOXK1P85037 733 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.03□□□□□ -0.8
SPG11-209ENST00000558253 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 SCN11AQ9UI33 1791 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 WDR17Q8IZU2 1322 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
SPG11-209ENST00000558253 RFX7Q2KHR2 1363 aa10.02□□□□□ -0.8
SPG11-209ENST00000558253 ZKSCAN1P17029 563 aaPredicted RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 PROSER3Q2NL68 480 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 COPS6Q7L5N1 327 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 XAGE3Q8WTP9 111 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 ANP32BQ92688 251 aaKnown RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 CARD10Q9BWT7 1032 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 TEX13AQ9BXU3 409 aaPredicted RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 GRPEL1Q9HAV7 217 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 LIMCH1Q9UPQ0 1083 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 ATP6V1DQ9Y5K8 247 aa10.02□□□□□ -0.81
SPG11-209ENST00000558253 DDX49Q9Y6V7 483 aaKnown RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
SPG11-209ENST00000558253 WDR33Q9C0J8 1336 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms