RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 KIAA1551Q9HCM1 1747 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.57
SPG11-207ENST00000558138 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 PI4KAP2A4QPH2 592 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 NTSR2O95665 410 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 NPR1P16066 1061 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 FLIIQ13045 1269 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
SPG11-207ENST00000558138 PI4KAP1Q8N8J0 262 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
SPG11-207ENST00000558138 CACNA1SQ13698 1873 aa11.45□□□□□ -0.58
SPG11-207ENST00000558138 RNF123Q5XPI4 1314 aa11.45□□□□□ -0.58
SPG11-207ENST00000558138 KCNA3P22001 575 aa11.45□□□□□ -0.58
SPG11-207ENST00000558138 STYK1Q6J9G0 422 aa11.45□□□□□ -0.58
SPG11-207ENST00000558138 KSR2Q6VAB6 950 aa11.45□□□□□ -0.58
SPG11-207ENST00000558138 G2E3Q7L622 706 aa11.45□□□□□ -0.58
SPG11-207ENST00000558138 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
SPG11-207ENST00000558138 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
SPG11-207ENST00000558138 COL11A2P13942 1736 aaPredicted RBP11.45□□□□□ -0.58
SPG11-207ENST00000558138 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
SPG11-207ENST00000558138 C21orf2O43822 256 aa11.44□□□□□ -0.58
SPG11-207ENST00000558138 SRGNP10124 158 aa11.44□□□□□ -0.58
SPG11-207ENST00000558138 HCLS1P14317 486 aaPredicted RBP11.44□□□□□ -0.58
SPG11-207ENST00000558138 PRPF40BQ6NWY9 871 aaKnown RBP11.44□□□□□ -0.58
SPG11-207ENST00000558138 METTL22Q9BUU2 404 aaPredicted RBP11.44□□□□□ -0.58
SPG11-207ENST00000558138 BCL2L13Q9BXK5 485 aa11.44□□□□□ -0.58
SPG11-207ENST00000558138 CWC25Q9NXE8 425 aaPredicted RBP11.44□□□□□ -0.58
SPG11-207ENST00000558138 CHD4Q14839 1912 aa11.44□□□□□ -0.58
SPG11-207ENST00000558138 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
SPG11-207ENST00000558138 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
SPG11-207ENST00000558138 ALDH1B1P30837 517 aa11.43□□□□□ -0.58
SPG11-207ENST00000558138 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
SPG11-207ENST00000558138 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
SPG11-207ENST00000558138 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
SPG11-207ENST00000558138 ISCA1Q9BUE6 129 aa11.43□□□□□ -0.58
SPG11-207ENST00000558138 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
SPG11-207ENST00000558138 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
SPG11-207ENST00000558138 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
SPG11-207ENST00000558138 CACNA1FO60840 1977 aa11.42□□□□□ -0.58
SPG11-207ENST00000558138 IRS4O14654 1257 aaPredicted RBP11.42□□□□□ -0.58
SPG11-207ENST00000558138 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
SPG11-207ENST00000558138 DDX46Q7L014 1031 aaKnown RBP11.42□□□□□ -0.58
SPG11-207ENST00000558138 CCDC191Q8NCU4 936 aa11.42□□□□□ -0.58
SPG11-207ENST00000558138 ADCY9O60503 1353 aa11.41□□□□□ -0.58
SPG11-207ENST00000558138 RASSF7Q02833 373 aa11.41□□□□□ -0.58
SPG11-207ENST00000558138 CWF19L2Q2TBE0 894 aaKnown RBP11.41□□□□□ -0.58
SPG11-207ENST00000558138 SYNE4Q8N205 404 aa11.41□□□□□ -0.58
SPG11-207ENST00000558138 ZBTB38Q8NAP3 1195 aaPredicted RBP11.41□□□□□ -0.58
SPG11-207ENST00000558138 JARID2Q92833 1246 aaPredicted RBP11.41□□□□□ -0.58
SPG11-207ENST00000558138 RNF181Q9P0P0 153 aa11.41□□□□□ -0.58
SPG11-207ENST00000558138 F6X3S4 739 aa11.4□□□□□ -0.58
SPG11-207ENST00000558138 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
SPG11-207ENST00000558138 CT47B1P0C2W7 299 aaPredicted RBP11.4□□□□□ -0.58
SPG11-207ENST00000558138 TRIM28Q13263 835 aaKnown RBP11.4□□□□□ -0.58
SPG11-207ENST00000558138 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
SPG11-207ENST00000558138 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.58
SPG11-207ENST00000558138 RIC1Q4ADV7 1423 aa11.4□□□□□ -0.58
SPG11-207ENST00000558138 ZBED9Q6R2W3 1325 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 NEURL1BA8MQ27 555 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
SPG11-207ENST00000558138 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 CRY2Q49AN0 593 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 C9orf131Q5VYM1 1079 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
SPG11-207ENST00000558138 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 CCDC85AQ96PX6 553 aaPredicted RBP11.39□□□□□ -0.59
SPG11-207ENST00000558138 TAOK3Q9H2K8 898 aa11.39□□□□□ -0.59
SPG11-207ENST00000558138 PTPRCP08575 1304 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 SLX4Q8IY92 1834 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 KLRG2A4D1S0 409 aaPredicted RBP11.38□□□□□ -0.59
SPG11-207ENST00000558138 PDE8AO60658 829 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 IGKV5-2P06315 115 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 UBE3BQ7Z3V4 1068 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 LINS1Q8NG48 757 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 CRAMP1Q96RY5 1269 aa11.38□□□□□ -0.59
SPG11-207ENST00000558138 C9orf78Q9NZ63 289 aaPredicted RBP11.38□□□□□ -0.59
SPG11-207ENST00000558138 ABCC4O15439 1325 aa11.37□□□□□ -0.59
SPG11-207ENST00000558138 LMNB1P20700 586 aa11.37□□□□□ -0.59
SPG11-207ENST00000558138 GCKRQ14397 625 aa11.37□□□□□ -0.59
SPG11-207ENST00000558138 RTKN2Q8IZC4 609 aa11.37□□□□□ -0.59
SPG11-207ENST00000558138 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
SPG11-207ENST00000558138 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
SPG11-207ENST00000558138 CHMP3Q9Y3E7 222 aa11.37□□□□□ -0.59
SPG11-207ENST00000558138 LAMB2P55268 1798 aa11.36□□□□□ -0.59
SPG11-207ENST00000558138 DDX60Q8IY21 1712 aaKnown RBP11.36□□□□□ -0.59
SPG11-207ENST00000558138 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
SPG11-207ENST00000558138 GRAPQ13588 217 aa11.36□□□□□ -0.59
SPG11-207ENST00000558138 TRMT2AQ8IZ69 625 aaKnown RBP11.36□□□□□ -0.59
SPG11-207ENST00000558138 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
SPG11-207ENST00000558138 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
SPG11-207ENST00000558138 KIF16BQ96L93 1317 aa11.35□□□□□ -0.59
SPG11-207ENST00000558138 CDHR2Q9BYE9 1310 aa11.35□□□□□ -0.59
SPG11-207ENST00000558138 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
SPG11-207ENST00000558138 CTSWP56202 376 aa11.35□□□□□ -0.59
SPG11-207ENST00000558138 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms