RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 PGAP2Q9UHJ9 254 aa14.11□□□□□ -0.15
TRAV33-201ENST00000557514 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAV33-201ENST00000557514 IL17REQ8NFR9 667 aa14.1□□□□□ -0.15
TRAV33-201ENST00000557514 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
TRAV33-201ENST00000557514 CEMIPQ8WUJ3 1361 aa14.09□□□□□ -0.15
TRAV33-201ENST00000557514 PIP4K2AP48426 406 aaPredicted RBP14.09□□□□□ -0.15
TRAV33-201ENST00000557514 GRIPAP1Q4V328 841 aa14.09□□□□□ -0.15
TRAV33-201ENST00000557514 SLC51AQ86UW1 340 aa14.09□□□□□ -0.15
TRAV33-201ENST00000557514 NIM1KQ8IY84 436 aa14.09□□□□□ -0.15
TRAV33-201ENST00000557514 CDHR2Q9BYE9 1310 aa14.09□□□□□ -0.15
TRAV33-201ENST00000557514 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
TRAV33-201ENST00000557514 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
TRAV33-201ENST00000557514 KIF7Q2M1P5 1343 aa14.08□□□□□ -0.16
TRAV33-201ENST00000557514 TRPM7Q96QT4 1865 aa14.08□□□□□ -0.16
TRAV33-201ENST00000557514 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.16
TRAV33-201ENST00000557514 FAM155AB1AL88 458 aaPredicted RBP14.07□□□□□ -0.16
TRAV33-201ENST00000557514 KCNQ3O43525 872 aa14.07□□□□□ -0.16
TRAV33-201ENST00000557514 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
TRAV33-201ENST00000557514 ZNF408Q9H9D4 720 aa14.07□□□□□ -0.16
TRAV33-201ENST00000557514 USP16Q9Y5T5 823 aa14.07□□□□□ -0.16
TRAV33-201ENST00000557514 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
TRAV33-201ENST00000557514 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
TRAV33-201ENST00000557514 GMPSP49915 693 aaPredicted RBP14.06□□□□□ -0.16
TRAV33-201ENST00000557514 HUNKP57058 714 aa14.06□□□□□ -0.16
TRAV33-201ENST00000557514 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
TRAV33-201ENST00000557514 HTTP42858 3142 aa14.06□□□□□ -0.16
TRAV33-201ENST00000557514 PRAMEF22A3QJZ6 481 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 NBPF26B4DH59 902 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 PPIP5K2O43314 1243 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 HIRAP54198 1017 aaPredicted RBP14.05□□□□□ -0.16
TRAV33-201ENST00000557514 CXCL9Q07325 125 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 NBPF10Q6P3W6 841 aaKnown RBP14.05□□□□□ -0.16
TRAV33-201ENST00000557514 CDC37L1Q7L3B6 337 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 CTU1Q7Z7A3 348 aaKnown RBP14.05□□□□□ -0.16
TRAV33-201ENST00000557514 NBPF15Q8N660 670 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
TRAV33-201ENST00000557514 IBTKQ9P2D0 1353 aaPredicted RBP14.05□□□□□ -0.16
TRAV33-201ENST00000557514 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
TRAV33-201ENST00000557514 AOC3Q16853 763 aa14.04□□□□□ -0.16
TRAV33-201ENST00000557514 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
TRAV33-201ENST00000557514 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
TRAV33-201ENST00000557514 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
TRAV33-201ENST00000557514 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
TRAV33-201ENST00000557514 BTBD11A6QL63 1104 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 DIAPH1O60610 1272 aaKnown RBP14.03□□□□□ -0.16
TRAV33-201ENST00000557514 GTF2E1P29083 439 aaPredicted RBP14.03□□□□□ -0.16
TRAV33-201ENST00000557514 HLFQ16534 295 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 ZNRF3Q9ULT6 936 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 HPS5Q9UPZ3 1129 aa14.03□□□□□ -0.16
TRAV33-201ENST00000557514 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.16
TRAV33-201ENST00000557514 SNRPA1P09661 255 aaKnown RBP14.02□□□□□ -0.17
TRAV33-201ENST00000557514 KIF23Q02241 960 aaPredicted RBP14.02□□□□□ -0.17
TRAV33-201ENST00000557514 RGMBQ6NW40 437 aa14.02□□□□□ -0.17
TRAV33-201ENST00000557514 CRAMP1Q96RY5 1269 aa14.02□□□□□ -0.17
TRAV33-201ENST00000557514 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.17
TRAV33-201ENST00000557514 TRPA1O75762 1119 aa14.01□□□□□ -0.17
TRAV33-201ENST00000557514 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
TRAV33-201ENST00000557514 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
TRAV33-201ENST00000557514 GBA2Q9HCG7 927 aaPredicted RBP14□□□□□ -0.17
TRAV33-201ENST00000557514 UBN2Q6ZU65 1347 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 SHTN1A0MZ66 631 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 SLC10A3P09131 477 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
TRAV33-201ENST00000557514 DLK2Q6UY11 383 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
TRAV33-201ENST00000557514 ATP6V0A2Q9Y487 856 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 BRCA2P51587 3418 aa13.99□□□□□ -0.17
TRAV33-201ENST00000557514 KIAA2012Q0VF49 1180 aa13.98□□□□□ -0.17
TRAV33-201ENST00000557514 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
TRAV33-201ENST00000557514 BCL2L13Q9BXK5 485 aa13.98□□□□□ -0.17
TRAV33-201ENST00000557514 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
TRAV33-201ENST00000557514 RAD17O75943 681 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 ZNF157P51786 506 aaPredicted RBP13.97□□□□□ -0.17
TRAV33-201ENST00000557514 TNIP1Q15025 636 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 KRT26Q7Z3Y9 468 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 MICALL2Q8IY33 904 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 SUPT20HQ8NEM7 779 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 CSRNP1Q96S65 589 aa13.97□□□□□ -0.17
TRAV33-201ENST00000557514 CNOT7Q9UIV1 285 aaKnown RBP13.97□□□□□ -0.17
TRAV33-201ENST00000557514 MAP3K15Q6ZN16 1313 aa13.96□□□□□ -0.17
TRAV33-201ENST00000557514 NTSR2O95665 410 aa13.96□□□□□ -0.17
TRAV33-201ENST00000557514 C2orf69Q8N8R5 385 aa13.96□□□□□ -0.17
TRAV33-201ENST00000557514 YDJCA8MPS7 323 aa13.95□□□□□ -0.18
TRAV33-201ENST00000557514 ADM5C9JUS6 153 aa13.95□□□□□ -0.18
TRAV33-201ENST00000557514 H7C1D1 291 aa13.95□□□□□ -0.18
TRAV33-201ENST00000557514 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
TRAV33-201ENST00000557514 CENPFP49454 3210 aa13.95□□□□□ -0.18
TRAV33-201ENST00000557514 ABCC4O15439 1325 aa13.94□□□□□ -0.18
TRAV33-201ENST00000557514 EGFRP00533 1210 aa13.94□□□□□ -0.18
TRAV33-201ENST00000557514 GPTP24298 496 aa13.94□□□□□ -0.18
TRAV33-201ENST00000557514 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
TRAV33-201ENST00000557514 DPP8Q6V1X1 898 aaPredicted RBP13.94□□□□□ -0.18
TRAV33-201ENST00000557514 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms