RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
SLIRP-207ENST00000556831 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
SLIRP-207ENST00000556831 RASSF7Q02833 373 aa18.13■□□□□ 0.49
SLIRP-207ENST00000556831 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
SLIRP-207ENST00000556831 SUSD4Q5VX71 490 aa18.13■□□□□ 0.49
SLIRP-207ENST00000556831 TTLL6Q8N841 843 aa18.13■□□□□ 0.49
SLIRP-207ENST00000556831 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
SLIRP-207ENST00000556831 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
SLIRP-207ENST00000556831 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
SLIRP-207ENST00000556831 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
SLIRP-207ENST00000556831 ERFEQ4G0M1 354 aa18.12■□□□□ 0.49
SLIRP-207ENST00000556831 ZNF34Q8IZ26 560 aa18.12■□□□□ 0.49
SLIRP-207ENST00000556831 SBF1O95248 1867 aa18.12■□□□□ 0.49
SLIRP-207ENST00000556831 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
SLIRP-207ENST00000556831 ANKRD13DQ6ZTN6 518 aa18.11■□□□□ 0.49
SLIRP-207ENST00000556831 C3orf67Q6ZVT6 689 aa18.11■□□□□ 0.49
SLIRP-207ENST00000556831 PLBD2Q8NHP8 589 aa18.11■□□□□ 0.49
SLIRP-207ENST00000556831 ARFGEF2Q9Y6D5 1785 aa18.1■□□□□ 0.49
SLIRP-207ENST00000556831 RIC3Q7Z5B4 369 aa18.1■□□□□ 0.49
SLIRP-207ENST00000556831 SYNE4Q8N205 404 aa18.1■□□□□ 0.49
SLIRP-207ENST00000556831 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
SLIRP-207ENST00000556831 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 NTSR2O95665 410 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 SRGNP10124 158 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 OLFM4Q6UX06 510 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 MASTLQ96GX5 879 aa18.09■□□□□ 0.49
SLIRP-207ENST00000556831 UTP14AQ9BVJ6 771 aaKnown RBP18.09■□□□□ 0.49
SLIRP-207ENST00000556831 HSPA1AP0DMV8 641 aaKnown RBP18.08■□□□□ 0.48
SLIRP-207ENST00000556831 HSPA1BP0DMV9 641 aaKnown RBP18.08■□□□□ 0.48
SLIRP-207ENST00000556831 TCIRG1Q13488 830 aa18.08■□□□□ 0.48
SLIRP-207ENST00000556831 STYK1Q6J9G0 422 aa18.08■□□□□ 0.48
SLIRP-207ENST00000556831 LAMB2P55268 1798 aa18.07■□□□□ 0.48
SLIRP-207ENST00000556831 NFKBIEO00221 500 aa18.07■□□□□ 0.48
SLIRP-207ENST00000556831 C21orf2O43822 256 aa18.07■□□□□ 0.48
SLIRP-207ENST00000556831 NPR1P16066 1061 aa18.07■□□□□ 0.48
SLIRP-207ENST00000556831 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
SLIRP-207ENST00000556831 RPGRQ92834 1020 aaKnown RBP18.07■□□□□ 0.48
SLIRP-207ENST00000556831 CCDC88AQ3V6T2 1871 aa18.07■□□□□ 0.48
SLIRP-207ENST00000556831 FER1L6Q2WGJ9 1857 aa18.06■□□□□ 0.48
SLIRP-207ENST00000556831 KLRG2A4D1S0 409 aaPredicted RBP18.06■□□□□ 0.48
SLIRP-207ENST00000556831 C9orf131Q5VYM1 1079 aa18.06■□□□□ 0.48
SLIRP-207ENST00000556831 RBM46Q8TBY0 533 aaKnown RBP18.06■□□□□ 0.48
SLIRP-207ENST00000556831 TRMT112Q9UI30 125 aaKnown RBP18.06■□□□□ 0.48
SLIRP-207ENST00000556831 E9PSI1 815 aa18.05■□□□□ 0.48
SLIRP-207ENST00000556831 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
SLIRP-207ENST00000556831 PRPF40BQ6NWY9 871 aaKnown RBP18.05■□□□□ 0.48
SLIRP-207ENST00000556831 NLRP10Q86W26 655 aa18.05■□□□□ 0.48
SLIRP-207ENST00000556831 MIER1Q8N108 512 aa18.05■□□□□ 0.48
SLIRP-207ENST00000556831 COL4A1P02462 1669 aa18.05■□□□□ 0.48
SLIRP-207ENST00000556831 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
SLIRP-207ENST00000556831 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
SLIRP-207ENST00000556831 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
SLIRP-207ENST00000556831 ALDH1B1P30837 517 aa18.04■□□□□ 0.48
SLIRP-207ENST00000556831 NEXNQ0ZGT2 675 aa18.04■□□□□ 0.48
SLIRP-207ENST00000556831 G2E3Q7L622 706 aa18.04■□□□□ 0.48
SLIRP-207ENST00000556831 NLRP3Q96P20 1036 aa18.04■□□□□ 0.48
SLIRP-207ENST00000556831 DDX60Q8IY21 1712 aaKnown RBP18.03■□□□□ 0.48
SLIRP-207ENST00000556831 SH3TC1Q8TE82 1336 aa18.03■□□□□ 0.48
SLIRP-207ENST00000556831 FSTL1Q12841 308 aa18.03■□□□□ 0.48
SLIRP-207ENST00000556831 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
SLIRP-207ENST00000556831 TIAM2Q8IVF5 1701 aa18.03■□□□□ 0.48
SLIRP-207ENST00000556831 TAF1P21675 1872 aa18.03■□□□□ 0.48
SLIRP-207ENST00000556831 ZNF521Q96K83 1311 aa18.02■□□□□ 0.48
SLIRP-207ENST00000556831 HCLS1P14317 486 aaPredicted RBP18.02■□□□□ 0.48
SLIRP-207ENST00000556831 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.48
SLIRP-207ENST00000556831 C7orf43Q8WVR3 580 aa18.02■□□□□ 0.48
SLIRP-207ENST00000556831 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
SLIRP-207ENST00000556831 MYD88Q99836 296 aa18.02■□□□□ 0.48
SLIRP-207ENST00000556831 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.48
SLIRP-207ENST00000556831 CRY2Q49AN0 593 aa18.01■□□□□ 0.47
SLIRP-207ENST00000556831 ISCA1Q9BUE6 129 aa18.01■□□□□ 0.47
SLIRP-207ENST00000556831 MAP3K2Q9Y2U5 619 aa18.01■□□□□ 0.47
SLIRP-207ENST00000556831 SNED1Q8TER0 1413 aa18■□□□□ 0.47
SLIRP-207ENST00000556831 VAMP4O75379 141 aa18■□□□□ 0.47
SLIRP-207ENST00000556831 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
SLIRP-207ENST00000556831 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
SLIRP-207ENST00000556831 KSR2Q6VAB6 950 aa18■□□□□ 0.47
SLIRP-207ENST00000556831 CACNA1FO60840 1977 aa18■□□□□ 0.47
SLIRP-207ENST00000556831 PI4KAP2A4QPH2 592 aa17.99■□□□□ 0.47
SLIRP-207ENST00000556831 HTRA3P83110 453 aa17.99■□□□□ 0.47
SLIRP-207ENST00000556831 FLIIQ13045 1269 aa17.99■□□□□ 0.47
SLIRP-207ENST00000556831 CCDC93Q567U6 631 aa17.99■□□□□ 0.47
SLIRP-207ENST00000556831 PI4KAP1Q8N8J0 262 aa17.99■□□□□ 0.47
SLIRP-207ENST00000556831 JARID2Q92833 1246 aaPredicted RBP17.99■□□□□ 0.47
SLIRP-207ENST00000556831 METTL22Q9BUU2 404 aaPredicted RBP17.99■□□□□ 0.47
SLIRP-207ENST00000556831 CWC25Q9NXE8 425 aaPredicted RBP17.99■□□□□ 0.47
SLIRP-207ENST00000556831 MLLT1Q03111 559 aaPredicted RBP17.98■□□□□ 0.47
SLIRP-207ENST00000556831 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
SLIRP-207ENST00000556831 CCDC191Q8NCU4 936 aa17.98■□□□□ 0.47
SLIRP-207ENST00000556831 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
SLIRP-207ENST00000556831 NMRK2Q9NPI5 230 aa17.98■□□□□ 0.47
SLIRP-207ENST00000556831 LMNB1P20700 586 aa17.97■□□□□ 0.47
SLIRP-207ENST00000556831 SLC10A5Q5PT55 438 aa17.97■□□□□ 0.47
SLIRP-207ENST00000556831 DDX46Q7L014 1031 aaKnown RBP17.97■□□□□ 0.47
SLIRP-207ENST00000556831 FAM89AQ96GI7 184 aa17.97■□□□□ 0.47
SLIRP-207ENST00000556831 COL4A5P29400 1685 aa17.96■□□□□ 0.47
SLIRP-207ENST00000556831 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
SLIRP-207ENST00000556831 SLFN5Q08AF3 891 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms