RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 GPTP24298 496 aa29.38■■■□□ 2.29
PABPN1-207ENST00000556821 TPTE2Q6XPS3 522 aa29.38■■■□□ 2.29
PABPN1-207ENST00000556821 C8orf58Q8NAV2 365 aa29.38■■■□□ 2.29
PABPN1-207ENST00000556821 DDX60Q8IY21 1712 aaKnown RBP29.37■■■□□ 2.29
PABPN1-207ENST00000556821 TTLL6Q8N841 843 aa29.37■■■□□ 2.29
PABPN1-207ENST00000556821 SRGNP10124 158 aa29.36■■■□□ 2.29
PABPN1-207ENST00000556821 AIMP1Q12904 312 aaKnown RBP29.36■■■□□ 2.29
PABPN1-207ENST00000556821 TSR2Q969E8 191 aaKnown RBP29.36■■■□□ 2.29
PABPN1-207ENST00000556821 DBF4Q9UBU7 674 aaPredicted RBP29.36■■■□□ 2.29
PABPN1-207ENST00000556821 RIC1Q4ADV7 1423 aa29.36■■■□□ 2.29
PABPN1-207ENST00000556821 ELL2O00472 640 aaPredicted RBP29.35■■■□□ 2.29
PABPN1-207ENST00000556821 IL16Q14005 1332 aa29.35■■■□□ 2.29
PABPN1-207ENST00000556821 KLRG2A4D1S0 409 aaPredicted RBP29.34■■■□□ 2.29
PABPN1-207ENST00000556821 NUTM1Q86Y26 1132 aa29.34■■■□□ 2.29
PABPN1-207ENST00000556821 ZNF622Q969S3 477 aaKnown RBP eCLIP29.34■■■□□ 2.292e-8■■□□□ 11.7
PABPN1-207ENST00000556821 SUSD4Q5VX71 490 aa29.33■■■□□ 2.29
PABPN1-207ENST00000556821 TAF1P21675 1872 aa29.32■■■□□ 2.28
PABPN1-207ENST00000556821 NTSR2O95665 410 aa29.32■■■□□ 2.28
PABPN1-207ENST00000556821 STYK1Q6J9G0 422 aa29.32■■■□□ 2.28
PABPN1-207ENST00000556821 TSPYL6Q8N831 410 aa29.32■■■□□ 2.28
PABPN1-207ENST00000556821 NYXQ9GZU5 481 aa29.32■■■□□ 2.28
PABPN1-207ENST00000556821 SALL2Q9Y467 1007 aaPredicted RBP29.32■■■□□ 2.28
PABPN1-207ENST00000556821 NFKBIEO00221 500 aa29.31■■■□□ 2.28
PABPN1-207ENST00000556821 ERFEQ4G0M1 354 aa29.31■■■□□ 2.28
PABPN1-207ENST00000556821 MASTLQ96GX5 879 aa29.3■■■□□ 2.28
PABPN1-207ENST00000556821 CREBZFQ9NS37 354 aa29.3■■■□□ 2.28
PABPN1-207ENST00000556821 HYPKQ9NX55 129 aa29.3■■■□□ 2.28
PABPN1-207ENST00000556821 GTF2E1P29083 439 aaPredicted RBP29.29■■■□□ 2.28
PABPN1-207ENST00000556821 PARP10Q53GL7 1025 aa29.29■■■□□ 2.28
PABPN1-207ENST00000556821 PLBD2Q8NHP8 589 aa29.28■■■□□ 2.28
PABPN1-207ENST00000556821 CNKSR1Q969H4 720 aa29.28■■■□□ 2.28
PABPN1-207ENST00000556821 PRDM10Q9NQV6 1147 aa29.28■■■□□ 2.28
PABPN1-207ENST00000556821 FANCIQ9NVI1 1328 aa29.27■■■□□ 2.28
PABPN1-207ENST00000556821 TCIRG1Q13488 830 aa29.27■■■□□ 2.28
PABPN1-207ENST00000556821 HSP90AB3PQ58FF7 597 aa29.27■■■□□ 2.28
PABPN1-207ENST00000556821 PRPF40BQ6NWY9 871 aaKnown RBP29.27■■■□□ 2.28
PABPN1-207ENST00000556821 WDR63Q8IWG1 891 aa29.27■■■□□ 2.28
PABPN1-207ENST00000556821 FOXN1O15353 648 aa29.26■■■□□ 2.27
PABPN1-207ENST00000556821 NPR1P16066 1061 aa29.26■■■□□ 2.27
PABPN1-207ENST00000556821 CRY2Q49AN0 593 aa29.26■■■□□ 2.27
PABPN1-207ENST00000556821 ANKRD13DQ6ZTN6 518 aa29.25■■■□□ 2.27
PABPN1-207ENST00000556821 PPP1R42Q7Z4L9 355 aa29.25■■■□□ 2.27
PABPN1-207ENST00000556821 NLRP10Q86W26 655 aa29.25■■■□□ 2.27
PABPN1-207ENST00000556821 PHAXQ9H814 394 aaKnown RBP29.25■■■□□ 2.27
PABPN1-207ENST00000556821 C21orf2O43822 256 aa29.24■■■□□ 2.27
PABPN1-207ENST00000556821 ZNF219Q9P2Y4 722 aaPredicted RBP29.24■■■□□ 2.27
PABPN1-207ENST00000556821 MKRN1Q9UHC7 482 aaKnown RBP29.24■■■□□ 2.27
PABPN1-207ENST00000556821 DPY19L2Q6NUT2 758 aa29.23■■■□□ 2.27
PABPN1-207ENST00000556821 SPINK5Q9NQ38 1064 aaPredicted RBP29.23■■■□□ 2.27
PABPN1-207ENST00000556821 MYH3P11055 1940 aa29.22■■■□□ 2.27
PABPN1-207ENST00000556821 TWISTNBQ3B726 338 aaPredicted RBP29.22■■■□□ 2.27
PABPN1-207ENST00000556821 CCDC30Q5VVM6 783 aa29.22■■■□□ 2.27
PABPN1-207ENST00000556821 CHADLQ6NUI6 762 aa29.22■■■□□ 2.27
PABPN1-207ENST00000556821 C3orf67Q6ZVT6 689 aa29.22■■■□□ 2.27
PABPN1-207ENST00000556821 UTP14AQ9BVJ6 771 aaKnown RBP29.22■■■□□ 2.27
PABPN1-207ENST00000556821 RNF123Q5XPI4 1314 aa29.21■■■□□ 2.27
PABPN1-207ENST00000556821 C7orf43Q8WVR3 580 aa29.21■■■□□ 2.27
PABPN1-207ENST00000556821 ISCA1Q9BUE6 129 aa29.21■■■□□ 2.27
PABPN1-207ENST00000556821 ZNF521Q96K83 1311 aa29.2■■■□□ 2.27
PABPN1-207ENST00000556821 CNTNAP1P78357 1384 aa29.19■■■□□ 2.26
PABPN1-207ENST00000556821 SLC10A5Q5PT55 438 aa29.19■■■□□ 2.26
PABPN1-207ENST00000556821 CCER2I3L3R5 266 aa29.18■■■□□ 2.26
PABPN1-207ENST00000556821 SYNE4Q8N205 404 aa29.18■■■□□ 2.26
PABPN1-207ENST00000556821 SNED1Q8TER0 1413 aa29.18■■■□□ 2.26
PABPN1-207ENST00000556821 ATP5J2-PTCD1G3V325 749 aa29.17■■■□□ 2.26
PABPN1-207ENST00000556821 TCERG1O14776 1098 aaKnown RBP29.17■■■□□ 2.26
PABPN1-207ENST00000556821 POTEIP0CG38 1075 aa29.17■■■□□ 2.26
PABPN1-207ENST00000556821 POTEJP0CG39 1038 aa29.17■■■□□ 2.26
PABPN1-207ENST00000556821 ZNF428Q96B54 188 aa29.17■■■□□ 2.26
PABPN1-207ENST00000556821 CHMP4AQ9BY43 222 aa29.17■■■□□ 2.26
PABPN1-207ENST00000556821 HOXA10P31260 410 aaPredicted RBP29.16■■■□□ 2.26
PABPN1-207ENST00000556821 GOLGA2Q08379 1002 aa29.16■■■□□ 2.26
PABPN1-207ENST00000556821 PASKQ96RG2 1323 aa29.16■■■□□ 2.26
PABPN1-207ENST00000556821 LTBP3Q9NS15 1303 aa29.16■■■□□ 2.26
PABPN1-207ENST00000556821 LRRC37AA6NMS7 1700 aa29.15■■■□□ 2.26
PABPN1-207ENST00000556821 CTCFP49711 727 aaPredicted RBP29.15■■■□□ 2.26
PABPN1-207ENST00000556821 EXOSC9Q06265 439 aaKnown RBP29.15■■■□□ 2.26
PABPN1-207ENST00000556821 OLFM4Q6UX06 510 aa29.15■■■□□ 2.26
PABPN1-207ENST00000556821 RIC3Q7Z5B4 369 aa29.15■■■□□ 2.26
PABPN1-207ENST00000556821 TRMT112Q9UI30 125 aaKnown RBP29.15■■■□□ 2.26
PABPN1-207ENST00000556821 SH3TC1Q8TE82 1336 aa29.15■■■□□ 2.26
PABPN1-207ENST00000556821 ALDH1B1P30837 517 aa29.14■■■□□ 2.26
PABPN1-207ENST00000556821 RPGRQ92834 1020 aaKnown RBP29.14■■■□□ 2.26
PABPN1-207ENST00000556821 COL4A1P02462 1669 aa29.13■■■□□ 2.25
PABPN1-207ENST00000556821 TRIM28Q13263 835 aaKnown RBP29.13■■■□□ 2.25
PABPN1-207ENST00000556821 SOGA3Q5TF21 947 aa29.13■■■□□ 2.25
PABPN1-207ENST00000556821 TAOK3Q9H2K8 898 aa29.13■■■□□ 2.25
PABPN1-207ENST00000556821 VAMP4O75379 141 aa29.12■■■□□ 2.25
PABPN1-207ENST00000556821 HCLS1P14317 486 aaPredicted RBP29.12■■■□□ 2.25
PABPN1-207ENST00000556821 G2E3Q7L622 706 aa29.12■■■□□ 2.25
PABPN1-207ENST00000556821 NLRP3Q96P20 1036 aa29.12■■■□□ 2.25
PABPN1-207ENST00000556821 STK31Q9BXU1 1019 aa29.12■■■□□ 2.25
PABPN1-207ENST00000556821 WBP1LQ9NX94 342 aa29.12■■■□□ 2.25
PABPN1-207ENST00000556821 CCDC93Q567U6 631 aa29.11■■■□□ 2.25
PABPN1-207ENST00000556821 CRAMP1Q96RY5 1269 aa29.11■■■□□ 2.25
PABPN1-207ENST00000556821 DDNO94850 711 aaPredicted RBP29.1■■■□□ 2.25
PABPN1-207ENST00000556821 VEGFBP49765 207 aa29.1■■■□□ 2.25
PABPN1-207ENST00000556821 SLC51AQ86UW1 340 aa29.1■■■□□ 2.25
PABPN1-207ENST00000556821 MYD88Q99836 296 aa29.1■■■□□ 2.25
PABPN1-207ENST00000556821 MYH16Q9H6N6 1097 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms