RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
SLIRP-206ENST00000556375 NLRP10Q86W26 655 aa14.86□□□□□ -0.03
SLIRP-206ENST00000556375 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
SLIRP-206ENST00000556375 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
SLIRP-206ENST00000556375 TIAM2Q8IVF5 1701 aa14.86□□□□□ -0.03
SLIRP-206ENST00000556375 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
SLIRP-206ENST00000556375 CRY2Q49AN0 593 aa14.85□□□□□ -0.03
SLIRP-206ENST00000556375 DIEXFQ68CQ4 756 aaKnown RBP14.85□□□□□ -0.03
SLIRP-206ENST00000556375 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
SLIRP-206ENST00000556375 UTP14AQ9BVJ6 771 aaKnown RBP14.85□□□□□ -0.03
SLIRP-206ENST00000556375 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
SLIRP-206ENST00000556375 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
SLIRP-206ENST00000556375 ISCA1Q9BUE6 129 aa14.84□□□□□ -0.03
SLIRP-206ENST00000556375 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
SLIRP-206ENST00000556375 DICER1Q9UPY3 1922 aaKnown RBP14.84□□□□□ -0.03
SLIRP-206ENST00000556375 DDX58O95786 925 aaKnown RBP14.83□□□□□ -0.04
SLIRP-206ENST00000556375 RASSF7Q02833 373 aa14.82□□□□□ -0.04
SLIRP-206ENST00000556375 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
SLIRP-206ENST00000556375 SOGA3Q5TF21 947 aa14.82□□□□□ -0.04
SLIRP-206ENST00000556375 RIC3Q7Z5B4 369 aa14.82□□□□□ -0.04
SLIRP-206ENST00000556375 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
SLIRP-206ENST00000556375 SH3TC1Q8TE82 1336 aa14.82□□□□□ -0.04
SLIRP-206ENST00000556375 NFKBIEO00221 500 aa14.81□□□□□ -0.04
SLIRP-206ENST00000556375 C21orf2O43822 256 aa14.81□□□□□ -0.04
SLIRP-206ENST00000556375 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
SLIRP-206ENST00000556375 HOXA10P31260 410 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-206ENST00000556375 TRIM28Q13263 835 aaKnown RBP14.81□□□□□ -0.04
SLIRP-206ENST00000556375 SLC10A5Q5PT55 438 aa14.81□□□□□ -0.04
SLIRP-206ENST00000556375 C9orf131Q5VYM1 1079 aa14.81□□□□□ -0.04
SLIRP-206ENST00000556375 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
SLIRP-206ENST00000556375 ATP5J2-PTCD1G3V325 749 aa14.8□□□□□ -0.04
SLIRP-206ENST00000556375 TCERG1O14776 1098 aaKnown RBP14.8□□□□□ -0.04
SLIRP-206ENST00000556375 VAMP4O75379 141 aa14.8□□□□□ -0.04
SLIRP-206ENST00000556375 NLRP3Q96P20 1036 aa14.8□□□□□ -0.04
SLIRP-206ENST00000556375 RNF181Q9P0P0 153 aa14.8□□□□□ -0.04
SLIRP-206ENST00000556375 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-206ENST00000556375 LTBP3Q9NS15 1303 aa14.8□□□□□ -0.04
SLIRP-206ENST00000556375 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
SLIRP-206ENST00000556375 LMNB1P20700 586 aa14.79□□□□□ -0.04
SLIRP-206ENST00000556375 CCDC93Q567U6 631 aa14.79□□□□□ -0.04
SLIRP-206ENST00000556375 C3orf67Q6ZVT6 689 aa14.79□□□□□ -0.04
SLIRP-206ENST00000556375 C7orf43Q8WVR3 580 aa14.79□□□□□ -0.04
SLIRP-206ENST00000556375 METTL22Q9BUU2 404 aaPredicted RBP14.79□□□□□ -0.04
SLIRP-206ENST00000556375 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
SLIRP-206ENST00000556375 SNED1Q8TER0 1413 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 E9PSI1 815 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 KSR2Q6VAB6 950 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 MIER1Q8N108 512 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
SLIRP-206ENST00000556375 CRAMP1Q96RY5 1269 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 MYD88Q99836 296 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 TAOK3Q9H2K8 898 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 MAP3K2Q9Y2U5 619 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 MYH3P11055 1940 aa14.78□□□□□ -0.04
SLIRP-206ENST00000556375 PI4KAP2A4QPH2 592 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 HCLS1P14317 486 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-206ENST00000556375 PRELPP51888 382 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 FLIIQ13045 1269 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 G2E3Q7L622 706 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 SYNE4Q8N205 404 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 PI4KAP1Q8N8J0 262 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 CCDC191Q8NCU4 936 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-206ENST00000556375 LRRC37AA6NMS7 1700 aa14.77□□□□□ -0.05
SLIRP-206ENST00000556375 TAF1P21675 1872 aa14.76□□□□□ -0.05
SLIRP-206ENST00000556375 ZNF428Q96B54 188 aa14.76□□□□□ -0.05
SLIRP-206ENST00000556375 FAM89AQ96GI7 184 aa14.76□□□□□ -0.05
SLIRP-206ENST00000556375 CWC25Q9NXE8 425 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-206ENST00000556375 ABCC4O15439 1325 aa14.75□□□□□ -0.05
SLIRP-206ENST00000556375 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-206ENST00000556375 SLFN5Q08AF3 891 aa14.75□□□□□ -0.05
SLIRP-206ENST00000556375 NEXNQ0ZGT2 675 aa14.75□□□□□ -0.05
SLIRP-206ENST00000556375 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-206ENST00000556375 CC2D2BQ6DHV5 1058 aa14.75□□□□□ -0.05
SLIRP-206ENST00000556375 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-206ENST00000556375 ZNF526Q8TF50 670 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-206ENST00000556375 PCCAP05165 728 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-206ENST00000556375 IGKV5-2P06315 115 aa14.74□□□□□ -0.05
SLIRP-206ENST00000556375 HSP90B1P14625 803 aaKnown RBP14.74□□□□□ -0.05
SLIRP-206ENST00000556375 FKBP4Q02790 459 aaKnown RBP eCLIP14.74□□□□□ -0.05
SLIRP-206ENST00000556375 OLFM4Q6UX06 510 aa14.74□□□□□ -0.05
SLIRP-206ENST00000556375 RTKN2Q8IZC4 609 aa14.74□□□□□ -0.05
SLIRP-206ENST00000556375 IRS4O14654 1257 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-206ENST00000556375 SF3B3Q15393 1217 aaKnown RBP14.73□□□□□ -0.05
SLIRP-206ENST00000556375 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
SLIRP-206ENST00000556375 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
SLIRP-206ENST00000556375 DDX46Q7L014 1031 aaKnown RBP14.73□□□□□ -0.05
SLIRP-206ENST00000556375 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
SLIRP-206ENST00000556375 KDM2BQ8NHM5 1336 aa14.72□□□□□ -0.05
SLIRP-206ENST00000556375 CDHR2Q9BYE9 1310 aa14.72□□□□□ -0.05
SLIRP-206ENST00000556375 NEURL1BA8MQ27 555 aa14.72□□□□□ -0.05
SLIRP-206ENST00000556375 GRAPQ13588 217 aa14.72□□□□□ -0.05
SLIRP-206ENST00000556375 GRAPLQ8TC17 118 aaPredicted RBP14.72□□□□□ -0.05
SLIRP-206ENST00000556375 PSMD1Q99460 953 aa14.72□□□□□ -0.05
SLIRP-206ENST00000556375 COL4A1P02462 1669 aa14.71□□□□□ -0.05
SLIRP-206ENST00000556375 CWF19L2Q2TBE0 894 aaKnown RBP14.71□□□□□ -0.05
SLIRP-206ENST00000556375 TRMT2AQ8IZ69 625 aaKnown RBP14.71□□□□□ -0.05
SLIRP-206ENST00000556375 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
SLIRP-206ENST00000556375 ATP6V0A2Q9Y487 856 aa14.71□□□□□ -0.05
SLIRP-206ENST00000556375 LTBP1Q14766 1721 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms