RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
PCNX4-209ENST00000555569 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
PCNX4-209ENST00000555569 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
PCNX4-209ENST00000555569 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
PCNX4-209ENST00000555569 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.47
PCNX4-209ENST00000555569 IFT57Q9NWB7 429 aa17.96■□□□□ 0.47
PCNX4-209ENST00000555569 GNAI1P63096 354 aa17.95■□□□□ 0.46
PCNX4-209ENST00000555569 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
PCNX4-209ENST00000555569 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
PCNX4-209ENST00000555569 RPGRQ92834 1020 aaKnown RBP17.95■□□□□ 0.46
PCNX4-209ENST00000555569 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
PCNX4-209ENST00000555569 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
PCNX4-209ENST00000555569 VEGFAP15692 232 aaPredicted RBP17.94■□□□□ 0.46
PCNX4-209ENST00000555569 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
PCNX4-209ENST00000555569 RTKN2Q8IZC4 609 aa17.94■□□□□ 0.46
PCNX4-209ENST00000555569 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
PCNX4-209ENST00000555569 CEP350Q5VT06 3117 aa17.94■□□□□ 0.46
PCNX4-209ENST00000555569 HOXA10P31260 410 aaPredicted RBP17.93■□□□□ 0.46
PCNX4-209ENST00000555569 FSTL1Q12841 308 aa17.93■□□□□ 0.46
PCNX4-209ENST00000555569 TCIRG1Q13488 830 aa17.93■□□□□ 0.46
PCNX4-209ENST00000555569 NLRP10Q86W26 655 aa17.93■□□□□ 0.46
PCNX4-209ENST00000555569 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
PCNX4-209ENST00000555569 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
PCNX4-209ENST00000555569 LAMB2P55268 1798 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 ANP32CO43423 234 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 APLP1P51693 650 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 CRAMP1Q96RY5 1269 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
PCNX4-209ENST00000555569 HYPKQ9NX55 129 aa17.92■□□□□ 0.46
PCNX4-209ENST00000555569 CC2D2BQ6DHV5 1058 aa17.91■□□□□ 0.46
PCNX4-209ENST00000555569 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
PCNX4-209ENST00000555569 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
PCNX4-209ENST00000555569 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
PCNX4-209ENST00000555569 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
PCNX4-209ENST00000555569 POTECB2RU33 542 aa17.89■□□□□ 0.45
PCNX4-209ENST00000555569 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
PCNX4-209ENST00000555569 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
PCNX4-209ENST00000555569 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
PCNX4-209ENST00000555569 PPEF1O14829 653 aaPredicted RBP17.88■□□□□ 0.45
PCNX4-209ENST00000555569 DDNO94850 711 aaPredicted RBP17.88■□□□□ 0.45
PCNX4-209ENST00000555569 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
PCNX4-209ENST00000555569 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
PCNX4-209ENST00000555569 PSMD1Q99460 953 aa17.88■□□□□ 0.45
PCNX4-209ENST00000555569 SH3TC1Q8TE82 1336 aa17.88■□□□□ 0.45
PCNX4-209ENST00000555569 CCDC27Q2M243 656 aa17.87■□□□□ 0.45
PCNX4-209ENST00000555569 GRIPAP1Q4V328 841 aa17.87■□□□□ 0.45
PCNX4-209ENST00000555569 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
PCNX4-209ENST00000555569 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
PCNX4-209ENST00000555569 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
PCNX4-209ENST00000555569 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
PCNX4-209ENST00000555569 SCN4AP35499 1836 aa17.86■□□□□ 0.45
PCNX4-209ENST00000555569 ATP5J2-PTCD1G3V325 749 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 ABCC4O15439 1325 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 ZNF541Q9H0D2 1346 aa17.85■□□□□ 0.45
PCNX4-209ENST00000555569 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
PCNX4-209ENST00000555569 PHAXQ9H814 394 aaKnown RBP17.85■□□□□ 0.45
PCNX4-209ENST00000555569 TAF1P21675 1872 aa17.84■□□□□ 0.45
PCNX4-209ENST00000555569 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
PCNX4-209ENST00000555569 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
PCNX4-209ENST00000555569 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
PCNX4-209ENST00000555569 SLC51AQ86UW1 340 aa17.84■□□□□ 0.45
PCNX4-209ENST00000555569 L3MBTL3Q96JM7 780 aaPredicted RBP17.84■□□□□ 0.45
PCNX4-209ENST00000555569 ATP6V0A2Q9Y487 856 aa17.84■□□□□ 0.45
PCNX4-209ENST00000555569 FZD9O00144 591 aa17.83■□□□□ 0.44
PCNX4-209ENST00000555569 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
PCNX4-209ENST00000555569 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.44
PCNX4-209ENST00000555569 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
PCNX4-209ENST00000555569 JDP2Q8WYK2 163 aa17.83■□□□□ 0.44
PCNX4-209ENST00000555569 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
PCNX4-209ENST00000555569 IL16Q14005 1332 aa17.82■□□□□ 0.44
PCNX4-209ENST00000555569 IQCA1LA6NCM1 817 aa17.82■□□□□ 0.44
PCNX4-209ENST00000555569 BBOX1O75936 387 aa17.82■□□□□ 0.44
PCNX4-209ENST00000555569 DNAJC5GQ8N7S2 189 aa17.82■□□□□ 0.44
PCNX4-209ENST00000555569 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
PCNX4-209ENST00000555569 COL4A5P29400 1685 aa17.82■□□□□ 0.44
PCNX4-209ENST00000555569 GRAPQ13588 217 aa17.81■□□□□ 0.44
PCNX4-209ENST00000555569 LARGE2Q8N3Y3 721 aa17.81■□□□□ 0.44
PCNX4-209ENST00000555569 GRAPLQ8TC17 118 aaPredicted RBP17.81■□□□□ 0.44
PCNX4-209ENST00000555569 DDX58O95786 925 aaKnown RBP17.8■□□□□ 0.44
PCNX4-209ENST00000555569 HTRA3P83110 453 aa17.8■□□□□ 0.44
PCNX4-209ENST00000555569 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
PCNX4-209ENST00000555569 MYD88Q99836 296 aa17.8■□□□□ 0.44
PCNX4-209ENST00000555569 EIF6P56537 245 aaKnown RBP17.79■□□□□ 0.44
PCNX4-209ENST00000555569 SF3B3Q15393 1217 aaKnown RBP17.79■□□□□ 0.44
PCNX4-209ENST00000555569 RTL5Q5HYW3 569 aaPredicted RBP17.79■□□□□ 0.44
PCNX4-209ENST00000555569 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
PCNX4-209ENST00000555569 GPC2Q8N158 579 aa17.79■□□□□ 0.44
PCNX4-209ENST00000555569 SUPT20HQ8NEM7 779 aa17.79■□□□□ 0.44
PCNX4-209ENST00000555569 TAF1DQ9H5J8 278 aaPredicted RBP17.79■□□□□ 0.44
PCNX4-209ENST00000555569 IRS4O14654 1257 aaPredicted RBP17.78■□□□□ 0.44
PCNX4-209ENST00000555569 PPIP5K2O43314 1243 aa17.78■□□□□ 0.44
PCNX4-209ENST00000555569 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms