RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
PABPN1-205ENST00000555295 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
PABPN1-205ENST00000555295 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
PABPN1-205ENST00000555295 NTSR2O95665 410 aa16.72■□□□□ 0.27
PABPN1-205ENST00000555295 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
PABPN1-205ENST00000555295 PDIA6Q15084 440 aa16.72■□□□□ 0.27
PABPN1-205ENST00000555295 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
PABPN1-205ENST00000555295 COPS6Q7L5N1 327 aa16.72■□□□□ 0.27
PABPN1-205ENST00000555295 ANXA1P04083 346 aa16.71■□□□□ 0.27
PABPN1-205ENST00000555295 HOXA10P31260 410 aaPredicted RBP16.71■□□□□ 0.27
PABPN1-205ENST00000555295 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
PABPN1-205ENST00000555295 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
PABPN1-205ENST00000555295 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
PABPN1-205ENST00000555295 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
PABPN1-205ENST00000555295 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
PABPN1-205ENST00000555295 LRP10Q7Z4F1 713 aa16.7■□□□□ 0.26
PABPN1-205ENST00000555295 JDP2Q8WYK2 163 aa16.7■□□□□ 0.26
PABPN1-205ENST00000555295 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
PABPN1-205ENST00000555295 PSMD1Q99460 953 aa16.7■□□□□ 0.26
PABPN1-205ENST00000555295 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
PABPN1-205ENST00000555295 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
PABPN1-205ENST00000555295 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
PABPN1-205ENST00000555295 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
PABPN1-205ENST00000555295 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
PABPN1-205ENST00000555295 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
PABPN1-205ENST00000555295 GNAI1P63096 354 aa16.68■□□□□ 0.26
PABPN1-205ENST00000555295 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
PABPN1-205ENST00000555295 HYPKQ9NX55 129 aa16.68■□□□□ 0.26
PABPN1-205ENST00000555295 APAF1O14727 1248 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 SLC10A5Q5PT55 438 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 OLFM4Q6UX06 510 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
PABPN1-205ENST00000555295 IFT57Q9NWB7 429 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
PABPN1-205ENST00000555295 SH3TC1Q8TE82 1336 aa16.67■□□□□ 0.26
PABPN1-205ENST00000555295 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
PABPN1-205ENST00000555295 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
PABPN1-205ENST00000555295 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
PABPN1-205ENST00000555295 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
PABPN1-205ENST00000555295 KLRG1Q96E93 195 aa16.66■□□□□ 0.26
PABPN1-205ENST00000555295 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
PABPN1-205ENST00000555295 POTECB2RU33 542 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
PABPN1-205ENST00000555295 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
PABPN1-205ENST00000555295 LARGE2Q8N3Y3 721 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 DNAJC5GQ8N7S2 189 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 SUPT20HQ8NEM7 779 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
PABPN1-205ENST00000555295 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
PABPN1-205ENST00000555295 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
PABPN1-205ENST00000555295 ZNF541Q9H0D2 1346 aa16.64■□□□□ 0.25
PABPN1-205ENST00000555295 FZD9O00144 591 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 BBOX1O75936 387 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
PABPN1-205ENST00000555295 HTRA3P83110 453 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 NIM1KQ8IY84 436 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 GPC2Q8N158 579 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 ATP6V0A2Q9Y487 856 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 SCN4AP35499 1836 aa16.63■□□□□ 0.25
PABPN1-205ENST00000555295 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
PABPN1-205ENST00000555295 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
PABPN1-205ENST00000555295 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
PABPN1-205ENST00000555295 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
PABPN1-205ENST00000555295 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
PABPN1-205ENST00000555295 TMC4Q7Z404 712 aa16.62■□□□□ 0.25
PABPN1-205ENST00000555295 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
PABPN1-205ENST00000555295 VPS33BQ9H267 617 aa16.62■□□□□ 0.25
PABPN1-205ENST00000555295 TAF1DQ9H5J8 278 aaPredicted RBP16.62■□□□□ 0.25
PABPN1-205ENST00000555295 ABCC4O15439 1325 aa16.62■□□□□ 0.25
PABPN1-205ENST00000555295 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
PABPN1-205ENST00000555295 PPIP5K2O43314 1243 aa16.61■□□□□ 0.25
PABPN1-205ENST00000555295 EPHX2P34913 555 aa16.61■□□□□ 0.25
PABPN1-205ENST00000555295 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
PABPN1-205ENST00000555295 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
PABPN1-205ENST00000555295 GJA3Q9Y6H8 435 aa16.61■□□□□ 0.25
PABPN1-205ENST00000555295 ANP32CO43423 234 aa16.6■□□□□ 0.25
PABPN1-205ENST00000555295 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
PABPN1-205ENST00000555295 GRAPQ13588 217 aa16.6■□□□□ 0.25
PABPN1-205ENST00000555295 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
PABPN1-205ENST00000555295 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
PABPN1-205ENST00000555295 ELL2O00472 640 aaPredicted RBP16.59■□□□□ 0.25
PABPN1-205ENST00000555295 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
PABPN1-205ENST00000555295 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
PABPN1-205ENST00000555295 MPNDQ8N594 471 aa16.59■□□□□ 0.25
PABPN1-205ENST00000555295 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
PABPN1-205ENST00000555295 ISCA1Q9BUE6 129 aa16.59■□□□□ 0.25
PABPN1-205ENST00000555295 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.24
PABPN1-205ENST00000555295 CREBZFQ9NS37 354 aa16.58■□□□□ 0.24
PABPN1-205ENST00000555295 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
PABPN1-205ENST00000555295 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
PABPN1-205ENST00000555295 AOC3Q16853 763 aa16.57■□□□□ 0.24
PABPN1-205ENST00000555295 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
PABPN1-205ENST00000555295 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
PABPN1-205ENST00000555295 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
PABPN1-205ENST00000555295 TRIM28Q13263 835 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms