RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 KIF6Q6ZMV9 814 aa13.31□□□□□ -0.28
HNRNPC-218ENST00000555215 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
HNRNPC-218ENST00000555215 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
HNRNPC-218ENST00000555215 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
HNRNPC-218ENST00000555215 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 FMR1Q06787 632 aaKnown RBP eCLIP13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 EAPPQ56P03 285 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 CCDC146Q8IYE0 955 aa13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
HNRNPC-218ENST00000555215 EPHX2P34913 555 aa13.29□□□□□ -0.28
HNRNPC-218ENST00000555215 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-218ENST00000555215 PSMD1Q99460 953 aa13.29□□□□□ -0.28
HNRNPC-218ENST00000555215 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
HNRNPC-218ENST00000555215 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
HNRNPC-218ENST00000555215 CAPN15O75808 1086 aa13.28□□□□□ -0.28
HNRNPC-218ENST00000555215 DDX10Q13206 875 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-218ENST00000555215 NEUROD2Q15784 382 aa13.28□□□□□ -0.28
HNRNPC-218ENST00000555215 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-218ENST00000555215 CRAMP1Q96RY5 1269 aa13.28□□□□□ -0.28
HNRNPC-218ENST00000555215 LTBP1Q14766 1721 aa13.27□□□□□ -0.28
HNRNPC-218ENST00000555215 SCN4AP35499 1836 aa13.27□□□□□ -0.28
HNRNPC-218ENST00000555215 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 XAGE3Q8WTP9 111 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 TRIM35Q9UPQ4 493 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 GJA3Q9Y6H8 435 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 ERBB4Q15303 1308 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 RIC1Q4ADV7 1423 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 ADAMTSL1Q8N6G6 1762 aa13.27□□□□□ -0.29
HNRNPC-218ENST00000555215 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 EPS15P42566 896 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 VEGFBP49765 207 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 SCNN1DP51172 638 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 CNTNAP1P78357 1384 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 RALBP1Q15311 655 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 TNS4Q8IZW8 715 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 CNTROBQ8N137 903 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 GPC2Q8N158 579 aa13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-218ENST00000555215 ABCC4O15439 1325 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 CHL1O00533 1208 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 FOXN1O15353 648 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 NLRP10Q86W26 655 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 LARGE2Q8N3Y3 721 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-218ENST00000555215 TMEM88BA6NKF7 163 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 AOC3Q16853 763 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
HNRNPC-218ENST00000555215 EIF6P56537 245 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-218ENST00000555215 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
HNRNPC-218ENST00000555215 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
HNRNPC-218ENST00000555215 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
HNRNPC-218ENST00000555215 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-218ENST00000555215 TAF1P21675 1872 aa13.23□□□□□ -0.29
HNRNPC-218ENST00000555215 TRAF5O00463 557 aa13.22□□□□□ -0.29
HNRNPC-218ENST00000555215 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
HNRNPC-218ENST00000555215 CXCL9Q07325 125 aa13.22□□□□□ -0.29
HNRNPC-218ENST00000555215 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-218ENST00000555215 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
HNRNPC-218ENST00000555215 COL4A1P02462 1669 aa13.21□□□□□ -0.29
HNRNPC-218ENST00000555215 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-218ENST00000555215 SHTN1A0MZ66 631 aa13.21□□□□□ -0.29
HNRNPC-218ENST00000555215 RTFDC1Q9BY42 306 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-218ENST00000555215 TRMT112Q9UI30 125 aaKnown RBP13.21□□□□□ -0.29
HNRNPC-218ENST00000555215 RASSF10A6NK89 507 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 CST9Q5W186 159 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 SP8Q8IXZ3 490 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 LAMB2P55268 1798 aa13.2□□□□□ -0.3
HNRNPC-218ENST00000555215 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
HNRNPC-218ENST00000555215 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
HNRNPC-218ENST00000555215 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
HNRNPC-218ENST00000555215 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
HNRNPC-218ENST00000555215 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
HNRNPC-218ENST00000555215 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 BBOX1O75936 387 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 RAD17O75943 681 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 HIRAP54198 1017 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 GRAPQ13588 217 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
HNRNPC-218ENST00000555215 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms