RNA–Protein interactions for RNA: ENST00000554890.1

KTN1-218, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-218ENST00000554890 KIAA1024Q9UPX6 916 aa7□□□□□ -1.29
KTN1-218ENST00000554890 RBM19Q9Y4C8 960 aaKnown RBP7□□□□□ -1.29
KTN1-218ENST00000554890 PARP3Q9Y6F1 533 aa7□□□□□ -1.29
KTN1-218ENST00000554890 ELNP15502 786 aa6.99□□□□□ -1.29
KTN1-218ENST00000554890 ADH7P40394 386 aa6.99□□□□□ -1.29
KTN1-218ENST00000554890 CRTC2Q53ET0 693 aaPredicted RBP6.99□□□□□ -1.29
KTN1-218ENST00000554890 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
KTN1-218ENST00000554890 TNFRSF25Q93038 417 aa6.99□□□□□ -1.29
KTN1-218ENST00000554890 IQSEC3Q9UPP2 1182 aaPredicted RBP6.99□□□□□ -1.29
KTN1-218ENST00000554890 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.98□□□□□ -1.29
KTN1-218ENST00000554890 A0A0A0MRY4 1105 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 FAM196BA6NMK8 535 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 BACH1O14867 736 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 SRPK2P78362 688 aaKnown RBP6.98□□□□□ -1.29
KTN1-218ENST00000554890 PTK7Q13308 1070 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 RAB44Q7Z6P3 723 aaPredicted RBP6.98□□□□□ -1.29
KTN1-218ENST00000554890 SIX5Q8N196 739 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 SLC4A9Q96Q91 983 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 ARID3AQ99856 593 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 ZNF358Q9NW07 568 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 CABP1Q9NZU7 370 aa6.98□□□□□ -1.29
KTN1-218ENST00000554890 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L10C9JJH3 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L21D6R901 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 PAX4O43316 350 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 NRG1Q02297 640 aaPredicted RBP6.97□□□□□ -1.29
KTN1-218ENST00000554890 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 SFSWAPQ12872 951 aaKnown RBP6.97□□□□□ -1.29
KTN1-218ENST00000554890 C20orf204Q6ZNR8 217 aa6.97□□□□□ -1.29
KTN1-218ENST00000554890 LENG1Q96BZ8 264 aaPredicted RBP6.97□□□□□ -1.29
KTN1-218ENST00000554890 A6NJY4 79 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 DKK1O94907 266 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 TXLNAP40222 546 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 DPYDQ12882 1025 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 LRRC69Q6ZNQ3 347 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 ANKMY2Q8IV38 441 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 PBXIP1Q96AQ6 731 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
KTN1-218ENST00000554890 RNF112Q9ULX5 631 aa6.96□□□□□ -1.3
KTN1-218ENST00000554890 COL17A1Q9UMD9 1497 aaPredicted RBP6.96□□□□□ -1.3
KTN1-218ENST00000554890 ARID1BQ8NFD5 2236 aaPredicted RBP6.96□□□□□ -1.3
KTN1-218ENST00000554890 CDK2AP1O14519 115 aa6.95□□□□□ -1.3
KTN1-218ENST00000554890 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
KTN1-218ENST00000554890 TXKP42681 527 aa6.95□□□□□ -1.3
KTN1-218ENST00000554890 SEC13P55735 322 aa6.95□□□□□ -1.3
KTN1-218ENST00000554890 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
KTN1-218ENST00000554890 USP21Q9UK80 565 aa6.95□□□□□ -1.3
KTN1-218ENST00000554890 LILRB5O75023 590 aa6.94□□□□□ -1.3
KTN1-218ENST00000554890 SPEM2Q0P670 501 aa6.94□□□□□ -1.3
KTN1-218ENST00000554890 MTFR1Q15390 333 aa6.94□□□□□ -1.3
KTN1-218ENST00000554890 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
KTN1-218ENST00000554890 FAM200AQ8TCP9 573 aa6.94□□□□□ -1.3
KTN1-218ENST00000554890 M0R2N6 131 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 ATG7O95352 703 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 RAC1P63000 192 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 FMNL2Q96PY5 1086 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 ARXQ96QS3 562 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 PCMTD2Q9NV79 361 aa6.93□□□□□ -1.3
KTN1-218ENST00000554890 SCHIP1Q9P0W5 487 aaPredicted RBP6.93□□□□□ -1.3
KTN1-218ENST00000554890 NOVA2Q9UNW9 492 aaKnown RBP6.93□□□□□ -1.3
KTN1-218ENST00000554890 PPP1R15AO75807 674 aaPredicted RBP6.92□□□□□ -1.3
KTN1-218ENST00000554890 ELOAQ14241 798 aaKnown RBP6.92□□□□□ -1.3
KTN1-218ENST00000554890 ZDHHC1Q8WTX9 485 aa6.92□□□□□ -1.3
KTN1-218ENST00000554890 EPHA4P54764 986 aa6.91□□□□□ -1.3
KTN1-218ENST00000554890 JPH1Q9HDC5 661 aaPredicted RBP6.91□□□□□ -1.3
KTN1-218ENST00000554890 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
KTN1-218ENST00000554890 LGR5O75473 907 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 TBC1D8BQ0IIM8 1120 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 NEUROD1Q13562 356 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 TBCELQ5QJ74 424 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 NUDT8Q8WV74 236 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 TSPAN10Q9H1Z9 355 aaPredicted RBP6.9□□□□□ -1.3
KTN1-218ENST00000554890 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
KTN1-218ENST00000554890 SSTR4P31391 388 aa6.89□□□□□ -1.31
KTN1-218ENST00000554890 FMR1NBQ8N0W7 255 aaPredicted RBP6.89□□□□□ -1.31
KTN1-218ENST00000554890 STK32AQ8WU08 396 aa6.89□□□□□ -1.31
KTN1-218ENST00000554890 L3MBTL2Q969R5 705 aa6.89□□□□□ -1.31
KTN1-218ENST00000554890 ATAD2Q6PL18 1390 aa6.88□□□□□ -1.31
KTN1-218ENST00000554890 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
KTN1-218ENST00000554890 DMRTC2Q8IXT2 367 aaPredicted RBP6.88□□□□□ -1.31
KTN1-218ENST00000554890 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
KTN1-218ENST00000554890 EML1O00423 815 aa6.87□□□□□ -1.31
KTN1-218ENST00000554890 NOS2P35228 1153 aa6.87□□□□□ -1.31
KTN1-218ENST00000554890 IRAK1P51617 712 aa6.87□□□□□ -1.31
KTN1-218ENST00000554890 TEAD4Q15561 434 aa6.87□□□□□ -1.31
KTN1-218ENST00000554890 WFDC12Q8WWY7 111 aa6.87□□□□□ -1.31
KTN1-218ENST00000554890 BHMTQ93088 406 aa6.87□□□□□ -1.31
KTN1-218ENST00000554890 IGFLR1Q9H665 355 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms