RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-208	ENST00000554698	NOB1	Q9ULX3	412 aa	Known RBP	27.28	■■□□□ 1.96
SDR39U1-208	ENST00000554698	TGFB2	P61812	414 aa		27.27	■■□□□ 1.96
SDR39U1-208	ENST00000554698	LINS1	Q8NG48	757 aa		27.27	■■□□□ 1.96
SDR39U1-208	ENST00000554698	GTF2E1	P29083	439 aa	Predicted RBP	27.26	■■□□□ 1.95
SDR39U1-208	ENST00000554698	ERFE	Q4G0M1	354 aa		27.26	■■□□□ 1.95
SDR39U1-208	ENST00000554698	NUTM1	Q86Y26	1132 aa		27.26	■■□□□ 1.95
SDR39U1-208	ENST00000554698	TRMT112	Q9UI30	125 aa	Known RBP	27.26	■■□□□ 1.95
SDR39U1-208	ENST00000554698	ABCC12	Q96J65	1359 aa		27.26	■■□□□ 1.95
SDR39U1-208	ENST00000554698	NEURL1B	A8MQ27	555 aa		27.25	■■□□□ 1.95
SDR39U1-208	ENST00000554698	BEND3	Q5T5X7	828 aa		27.25	■■□□□ 1.95
SDR39U1-208	ENST00000554698	ARHGAP45	Q92619	1136 aa		27.25	■■□□□ 1.95
SDR39U1-208	ENST00000554698	CWC25	Q9NXE8	425 aa	Predicted RBP	27.25	■■□□□ 1.95
SDR39U1-208	ENST00000554698	PXDNL	A1KZ92	1463 aa		27.25	■■□□□ 1.95
SDR39U1-208	ENST00000554698	RIC1	Q4ADV7	1423 aa		27.25	■■□□□ 1.95
SDR39U1-208	ENST00000554698	CWF19L2	Q2TBE0	894 aa	Known RBP	27.24	■■□□□ 1.95
SDR39U1-208	ENST00000554698	SH3TC1	Q8TE82	1336 aa		27.24	■■□□□ 1.95
SDR39U1-208	ENST00000554698	KLRG2	A4D1S0	409 aa	Predicted RBP	27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698	PDE6B	P35913	854 aa		27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698	SLC10A5	Q5PT55	438 aa		27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698	KIAA1551	Q9HCM1	1747 aa		27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698	SLC4A10	Q6U841	1118 aa		27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698	API5	Q9BZZ5	524 aa	Known RBP	27.22	■■□□□ 1.95
SDR39U1-208	ENST00000554698		A0A0G2JLW4	131 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	IPO8	O15397	1037 aa	Known RBP	27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	PCCA	P05165	728 aa	Predicted RBP	27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	DPEP1	P16444	411 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	GCKR	Q14397	625 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	SYNE4	Q8N205	404 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	FAM89A	Q96GI7	184 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	RCAN3	Q9UKA8	241 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	PDZRN3	Q9UPQ7	1066 aa		27.21	■■□□□ 1.95
SDR39U1-208	ENST00000554698	ANKRD31	Q8N7Z5	1873 aa		27.2	■■□□□ 1.95
SDR39U1-208	ENST00000554698	ALDH1L1	O75891	902 aa		27.19	■■□□□ 1.94
SDR39U1-208	ENST00000554698	KCNA3	P22001	575 aa		27.19	■■□□□ 1.94
SDR39U1-208	ENST00000554698	CHRNA5	P30532	468 aa		27.19	■■□□□ 1.94
SDR39U1-208	ENST00000554698	SRCIN1	Q9C0H9	1055 aa		27.19	■■□□□ 1.94
SDR39U1-208	ENST00000554698	C2CD5	Q86YS7	1000 aa		27.18	■■□□□ 1.94
SDR39U1-208	ENST00000554698	FRAT1	Q92837	279 aa	Predicted RBP	27.18	■■□□□ 1.94
SDR39U1-208	ENST00000554698		H0YIN7	160 aa		27.17	■■□□□ 1.94
SDR39U1-208	ENST00000554698	CRY2	Q49AN0	593 aa		27.17	■■□□□ 1.94
SDR39U1-208	ENST00000554698	ATF7IP	Q6VMQ6	1270 aa		27.17	■■□□□ 1.94
SDR39U1-208	ENST00000554698	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698		H7C1W4	665 aa		27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698	SRGN	P10124	158 aa		27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698	HCLS1	P14317	486 aa	Predicted RBP	27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698	TRIM27	P14373	513 aa		27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698	RTL5	Q5HYW3	569 aa	Predicted RBP	27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698	ZKSCAN2	Q63HK3	967 aa		27.16	■■□□□ 1.94
SDR39U1-208	ENST00000554698	ABCC4	O15439	1325 aa		27.15	■■□□□ 1.94
SDR39U1-208	ENST00000554698	CDHR2	Q9BYE9	1310 aa		27.15	■■□□□ 1.94
SDR39U1-208	ENST00000554698	C3orf67	Q6ZVT6	689 aa		27.15	■■□□□ 1.94
SDR39U1-208	ENST00000554698	IRS4	O14654	1257 aa	Predicted RBP	27.14	■■□□□ 1.94
SDR39U1-208	ENST00000554698	NLRP3	Q96P20	1036 aa		27.14	■■□□□ 1.94
SDR39U1-208	ENST00000554698	CCT4	P50991	539 aa	Known RBP	27.13	■■□□□ 1.93
SDR39U1-208	ENST00000554698	CASP7	P55210	303 aa		27.13	■■□□□ 1.93
SDR39U1-208	ENST00000554698	JARID2	Q92833	1246 aa	Predicted RBP	27.13	■■□□□ 1.93
SDR39U1-208	ENST00000554698	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.13	■■□□□ 1.93
SDR39U1-208	ENST00000554698	HSP90B1	P14625	803 aa	Known RBP	27.12	■■□□□ 1.93
SDR39U1-208	ENST00000554698	STYK1	Q6J9G0	422 aa		27.12	■■□□□ 1.93
SDR39U1-208	ENST00000554698	UBE3B	Q7Z3V4	1068 aa		27.12	■■□□□ 1.93
SDR39U1-208	ENST00000554698	PIM2	Q9P1W9	311 aa		27.12	■■□□□ 1.93
SDR39U1-208	ENST00000554698	COL11A2	P13942	1736 aa	Predicted RBP	27.12	■■□□□ 1.93
SDR39U1-208	ENST00000554698	NPR1	P16066	1061 aa		27.11	■■□□□ 1.93
SDR39U1-208	ENST00000554698	MASTL	Q96GX5	879 aa		27.11	■■□□□ 1.93
SDR39U1-208	ENST00000554698	TNN	Q9UQP3	1299 aa		27.11	■■□□□ 1.93
SDR39U1-208	ENST00000554698	GRM8	O00222	908 aa		27.1	■■□□□ 1.93
SDR39U1-208	ENST00000554698	INTS3	Q68E01	1043 aa	Known RBP	27.1	■■□□□ 1.93
SDR39U1-208	ENST00000554698	DLEC1	Q9Y238	1755 aa		27.1	■■□□□ 1.93
SDR39U1-208	ENST00000554698	HOXA10	P31260	410 aa	Predicted RBP	27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	DDX60	Q8IY21	1712 aa	Known RBP	27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	UTY	O14607	1347 aa		27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	PDE8A	O60658	829 aa		27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	SF3B3	Q15393	1217 aa	Known RBP	27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.09	■■□□□ 1.93
SDR39U1-208	ENST00000554698	RPGR	Q92834	1020 aa	Known RBP	27.08	■■□□□ 1.93
SDR39U1-208	ENST00000554698	CLUAP1	Q96AJ1	413 aa		27.08	■■□□□ 1.93
SDR39U1-208	ENST00000554698	PLA2G12B	Q9BX93	195 aa		27.08	■■□□□ 1.93
SDR39U1-208	ENST00000554698	LAMB2	P55268	1798 aa		27.08	■■□□□ 1.92
SDR39U1-208	ENST00000554698	DALRD3	Q5D0E6	543 aa	Known RBP	27.07	■■□□□ 1.92
SDR39U1-208	ENST00000554698	TTLL6	Q8N841	843 aa		27.07	■■□□□ 1.92
SDR39U1-208	ENST00000554698	CNKSR1	Q969H4	720 aa		27.07	■■□□□ 1.92
SDR39U1-208	ENST00000554698	USP44	Q9H0E7	712 aa		27.07	■■□□□ 1.92
SDR39U1-208	ENST00000554698	WWC3	Q9ULE0	1092 aa		27.07	■■□□□ 1.92
SDR39U1-208	ENST00000554698	BRCA1	P38398	1863 aa	Known RBP	27.06	■■□□□ 1.92
SDR39U1-208	ENST00000554698	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.05	■■□□□ 1.92
SDR39U1-208	ENST00000554698	YBX3	P16989	372 aa	Known RBP eCLIP	27.05	■■□□□ 1.92
SDR39U1-208	ENST00000554698	DZIP1L	Q8IYY4	767 aa	Known RBP	27.05	■■□□□ 1.92
SDR39U1-208	ENST00000554698	CRAMP1	Q96RY5	1269 aa		27.05	■■□□□ 1.92
SDR39U1-208	ENST00000554698	CTSW	P56202	376 aa		27.04	■■□□□ 1.92
SDR39U1-208	ENST00000554698	RBM17	Q96I25	401 aa	Known RBP	27.04	■■□□□ 1.92
SDR39U1-208	ENST00000554698	BCS1L	Q9Y276	419 aa		27.04	■■□□□ 1.92
SDR39U1-208	ENST00000554698	RLBP1	P12271	317 aa		27.03	■■□□□ 1.92
SDR39U1-208	ENST00000554698	ALDH1B1	P30837	517 aa		27.03	■■□□□ 1.92
SDR39U1-208	ENST00000554698	PRPF40B	Q6NWY9	871 aa	Known RBP	27.03	■■□□□ 1.92
SDR39U1-208	ENST00000554698	FTSJ3	Q8IY81	847 aa	Known RBP	27.03	■■□□□ 1.92
SDR39U1-208	ENST00000554698	GPR162	Q16538	588 aa		27.02	■■□□□ 1.92
SDR39U1-208	ENST00000554698	PELP1	Q8IZL8	1130 aa	Known RBP	27.02	■■□□□ 1.92
SDR39U1-208	ENST00000554698	TMEM57	Q8N5G2	664 aa		27.02	■■□□□ 1.92

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms