RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 RIC1Q4ADV7 1423 aa16.1■□□□□ 0.17
MTHFD1-207ENST00000554677 ANXA1P04083 346 aa16.09■□□□□ 0.17
MTHFD1-207ENST00000554677 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-207ENST00000554677 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-207ENST00000554677 COL13A1Q5TAT6 717 aaPredicted RBP16.09■□□□□ 0.17
MTHFD1-207ENST00000554677 PSMD1Q99460 953 aa16.09■□□□□ 0.17
MTHFD1-207ENST00000554677 COL4A5P29400 1685 aa16.08■□□□□ 0.17
MTHFD1-207ENST00000554677 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
MTHFD1-207ENST00000554677 IQCA1LA6NCM1 817 aa16.07■□□□□ 0.16
MTHFD1-207ENST00000554677 SLC10A5Q5PT55 438 aa16.07■□□□□ 0.16
MTHFD1-207ENST00000554677 CRAMP1Q96RY5 1269 aa16.07■□□□□ 0.16
MTHFD1-207ENST00000554677 PASKQ96RG2 1323 aa16.07■□□□□ 0.16
MTHFD1-207ENST00000554677 ADAMTSL1Q8N6G6 1762 aa16.07■□□□□ 0.16
MTHFD1-207ENST00000554677 CHL1O00533 1208 aa16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 LDHDQ86WU2 507 aa16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
MTHFD1-207ENST00000554677 TAF1P21675 1872 aa16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 LAMB2P55268 1798 aa16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 PARP10Q53GL7 1025 aa16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 RPGRQ92834 1020 aaKnown RBP16.05■□□□□ 0.16
MTHFD1-207ENST00000554677 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
MTHFD1-207ENST00000554677 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
MTHFD1-207ENST00000554677 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
MTHFD1-207ENST00000554677 RBM17Q96I25 401 aaKnown RBP16.04■□□□□ 0.16
MTHFD1-207ENST00000554677 HACL1Q9UJ83 578 aa16.04■□□□□ 0.16
MTHFD1-207ENST00000554677 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 HSPA1AP0DMV8 641 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 HSPA1BP0DMV9 641 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 EPHX2P34913 555 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 LMOD3Q0VAK6 560 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 GPC2Q8N158 579 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-207ENST00000554677 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 AIMP1Q12904 312 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 GRIPAP1Q4V328 841 aa16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 RUNDC1Q96C34 613 aa16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 DDX21Q9NR30 783 aaKnown RBP eCLIP16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 MKRN1Q9UHC7 482 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 ADAMTS8Q9UP79 889 aa16.02■□□□□ 0.16
MTHFD1-207ENST00000554677 PPEF1O14829 653 aaPredicted RBP16.01■□□□□ 0.15
MTHFD1-207ENST00000554677 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
MTHFD1-207ENST00000554677 EAPPQ56P03 285 aaPredicted RBP16.01■□□□□ 0.15
MTHFD1-207ENST00000554677 JDP2Q8WYK2 163 aa16.01■□□□□ 0.15
MTHFD1-207ENST00000554677 ABCC4O15439 1325 aa16■□□□□ 0.15
MTHFD1-207ENST00000554677 ATP6V0A2Q9Y487 856 aa16■□□□□ 0.15
MTHFD1-207ENST00000554677 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 SCNN1DP51172 638 aa15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 MAP1SQ66K74 1059 aaPredicted RBP15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 PNMA8AQ86V59 439 aaPredicted RBP15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 LARGE2Q8N3Y3 721 aa15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 RTFDC1Q9BY42 306 aaPredicted RBP15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 CNTNAP1P78357 1384 aa15.99■□□□□ 0.15
MTHFD1-207ENST00000554677 TMEM88BA6NKF7 163 aa15.98■□□□□ 0.15
MTHFD1-207ENST00000554677 EPS15P42566 896 aa15.98■□□□□ 0.15
MTHFD1-207ENST00000554677 HSP90AB3PQ58FF7 597 aa15.98■□□□□ 0.15
MTHFD1-207ENST00000554677 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
MTHFD1-207ENST00000554677 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
MTHFD1-207ENST00000554677 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
MTHFD1-207ENST00000554677 BBOX1O75936 387 aa15.97■□□□□ 0.15
MTHFD1-207ENST00000554677 AOC3Q16853 763 aa15.97■□□□□ 0.15
MTHFD1-207ENST00000554677 SP8Q8IXZ3 490 aa15.97■□□□□ 0.15
MTHFD1-207ENST00000554677 VPS33BQ9H267 617 aa15.97■□□□□ 0.15
MTHFD1-207ENST00000554677 VEGFBP49765 207 aa15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 CFAP44Q96MT7 982 aa15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 ISCA1Q9BUE6 129 aa15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 TRMT112Q9UI30 125 aaKnown RBP15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 TRPM7Q96QT4 1865 aa15.96■□□□□ 0.15
MTHFD1-207ENST00000554677 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 HOXB7P09629 217 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 FMR1Q06787 632 aaKnown RBP eCLIP15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 HDGFL1Q5TGJ6 251 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 ANKRD13DQ6ZTN6 518 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
MTHFD1-207ENST00000554677 SH3TC1Q8TE82 1336 aa15.94■□□□□ 0.14
MTHFD1-207ENST00000554677 CXCL9Q07325 125 aa15.94■□□□□ 0.14
MTHFD1-207ENST00000554677 GRAPQ13588 217 aa15.94■□□□□ 0.14
MTHFD1-207ENST00000554677 DUSP27Q5VZP5 1158 aa15.94■□□□□ 0.14
MTHFD1-207ENST00000554677 TNS4Q8IZW8 715 aa15.94■□□□□ 0.14
MTHFD1-207ENST00000554677 GRAPLQ8TC17 118 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms