RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
LINC00517-202ENST00000554257 TBC1D9BQ66K14 1250 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 ANKRD44Q8N8A2 993 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 CLUAP1Q96AJ1 413 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 PLA2G12BQ9BX93 195 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 SLX4Q8IY92 1834 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 FOXO4P98177 505 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 RABL6Q3YEC7 729 aaPredicted RBP8.59□□□□□ -1.03
LINC00517-202ENST00000554257 CARMIL3Q8ND23 1372 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.59□□□□□ -1.04
LINC00517-202ENST00000554257 MTX1Q13505 466 aa8.59□□□□□ -1.04
LINC00517-202ENST00000554257 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.04
LINC00517-202ENST00000554257 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.04
LINC00517-202ENST00000554257 TBC1D2BQ9UPU7 963 aa8.59□□□□□ -1.04
LINC00517-202ENST00000554257 C10orf71Q711Q0 1435 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 AIMP1Q12904 312 aaKnown RBP8.58□□□□□ -1.04
LINC00517-202ENST00000554257 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.58□□□□□ -1.04
LINC00517-202ENST00000554257 MYD88Q99836 296 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 MYH7P12883 1935 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 A0A087WZG4 1122 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 DDR1Q08345 913 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 POLA2Q14181 598 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 FKBP8Q14318 412 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 CCDC191Q8NCU4 936 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
LINC00517-202ENST00000554257 RTL9Q8NET4 1388 aa8.58□□□□□ -1.04
LINC00517-202ENST00000554257 POLRMTO00411 1230 aaKnown RBP8.57□□□□□ -1.04
LINC00517-202ENST00000554257 BAG6P46379 1132 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 RFX5P48382 616 aaPredicted RBP8.57□□□□□ -1.04
LINC00517-202ENST00000554257 SUSD4Q5VX71 490 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 DDX19BQ9UMR2 479 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 AAMPQ13685 434 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 DDX58O95786 925 aaKnown RBP8.57□□□□□ -1.04
LINC00517-202ENST00000554257 MS4A1P11836 297 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 AK7Q96M32 723 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
LINC00517-202ENST00000554257 DICER1Q9UPY3 1922 aaKnown RBP8.57□□□□□ -1.04
LINC00517-202ENST00000554257 KLRG2A4D1S0 409 aaPredicted RBP8.56□□□□□ -1.04
LINC00517-202ENST00000554257 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
LINC00517-202ENST00000554257 CEP85Q6P2H3 762 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 SBF1O95248 1867 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 GRM8O00222 908 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 IGHDP01880 384 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 CSF1RP07333 972 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 SLC10A5Q5PT55 438 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 NFIXQ14938 502 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 TRAPPC3LQ5T215 181 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
LINC00517-202ENST00000554257 ZBTB38Q8NAP3 1195 aaPredicted RBP8.56□□□□□ -1.04
LINC00517-202ENST00000554257 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
LINC00517-202ENST00000554257 CHD4Q14839 1912 aa8.55□□□□□ -1.04
LINC00517-202ENST00000554257 HDAC1Q13547 482 aaPredicted RBP8.55□□□□□ -1.04
LINC00517-202ENST00000554257 ITPRIPQ8IWB1 547 aa8.55□□□□□ -1.04
LINC00517-202ENST00000554257 CCDC88AQ3V6T2 1871 aa8.55□□□□□ -1.04
LINC00517-202ENST00000554257 CWC25Q9NXE8 425 aaPredicted RBP8.55□□□□□ -1.04
LINC00517-202ENST00000554257 PNMA6EA0A0J9YXQ4 647 aa8.54□□□□□ -1.04
LINC00517-202ENST00000554257 HSP90AB3PQ58FF7 597 aa8.54□□□□□ -1.04
LINC00517-202ENST00000554257 FTSJ3Q8IY81 847 aaKnown RBP8.54□□□□□ -1.04
LINC00517-202ENST00000554257 SSH3Q8TE77 659 aa8.54□□□□□ -1.04
LINC00517-202ENST00000554257 MAST2Q6P0Q8 1798 aa8.54□□□□□ -1.04
LINC00517-202ENST00000554257 HMGB2P26583 209 aaKnown RBP8.54□□□□□ -1.04
LINC00517-202ENST00000554257 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
LINC00517-202ENST00000554257 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.54□□□□□ -1.04
LINC00517-202ENST00000554257 CDK5RAP2Q96SN8 1893 aa8.54□□□□□ -1.04
LINC00517-202ENST00000554257 PHF14O94880 888 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 SLC4A10Q6U841 1118 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 FLAD1Q8NFF5 587 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 BICC1Q9H694 974 aaKnown RBP8.53□□□□□ -1.04
LINC00517-202ENST00000554257 LRRFIP2Q9Y608 721 aaKnown RBP8.53□□□□□ -1.04
LINC00517-202ENST00000554257 PTGER2P43116 358 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 CRY2Q49AN0 593 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 ATP8B2P98198 1209 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 SALL3Q9BXA9 1300 aa8.53□□□□□ -1.04
LINC00517-202ENST00000554257 IRS2Q9Y4H2 1338 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 FOCADQ5VW36 1801 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 PRR5LQ6MZQ0 368 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 JARID2Q92833 1246 aaPredicted RBP8.52□□□□□ -1.05
LINC00517-202ENST00000554257 NOP58Q9Y2X3 529 aaKnown RBP8.52□□□□□ -1.05
LINC00517-202ENST00000554257 GNAI3P08754 354 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 GPTP24298 496 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 RFC4P35249 363 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 SMC5Q8IY18 1101 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 TTLL11Q8NHH1 800 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.05
LINC00517-202ENST00000554257 NIP7Q9Y221 180 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00517-202ENST00000554257 UBE3BQ7Z3V4 1068 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 FAM89AQ96GI7 184 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 PPP4R2Q9NY27 417 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 STK32BQ9NY57 414 aa8.51□□□□□ -1.05
LINC00517-202ENST00000554257 GNAI2P04899 355 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms