RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 COL13A1Q5TAT6 717 aaPredicted RBP22.61■■□□□ 1.21
SEC23A-206ENST00000553970 ZBTB3Q9H5J0 574 aa22.61■■□□□ 1.21
SEC23A-206ENST00000553970 RNF123Q5XPI4 1314 aa22.6■■□□□ 1.21
SEC23A-206ENST00000553970 GPTP24298 496 aa22.6■■□□□ 1.21
SEC23A-206ENST00000553970 EAPPQ56P03 285 aaPredicted RBP22.6■■□□□ 1.21
SEC23A-206ENST00000553970 ZNF34Q8IZ26 560 aa22.6■■□□□ 1.21
SEC23A-206ENST00000553970 TNS4Q8IZW8 715 aa22.6■■□□□ 1.21
SEC23A-206ENST00000553970 CRAMP1Q96RY5 1269 aa22.6■■□□□ 1.21
SEC23A-206ENST00000553970 THUMPD2Q9BTF0 503 aaKnown RBP22.6■■□□□ 1.21
SEC23A-206ENST00000553970 ZNF541Q9H0D2 1346 aa22.59■■□□□ 1.21
SEC23A-206ENST00000553970 POTEIP0CG38 1075 aa22.59■■□□□ 1.21
SEC23A-206ENST00000553970 POTEJP0CG39 1038 aa22.59■■□□□ 1.21
SEC23A-206ENST00000553970 EPHX2P34913 555 aa22.59■■□□□ 1.21
SEC23A-206ENST00000553970 RIPK4P57078 832 aa22.59■■□□□ 1.21
SEC23A-206ENST00000553970 UBN2Q6ZU65 1347 aa22.58■■□□□ 1.21
SEC23A-206ENST00000553970 PASKQ96RG2 1323 aa22.58■■□□□ 1.21
SEC23A-206ENST00000553970 HSP90AB3PQ58FF7 597 aa22.58■■□□□ 1.21
SEC23A-206ENST00000553970 OLFM4Q6UX06 510 aa22.58■■□□□ 1.21
SEC23A-206ENST00000553970 NLRP3Q96P20 1036 aa22.58■■□□□ 1.21
SEC23A-206ENST00000553970 CLEC11AQ9Y240 323 aa22.58■■□□□ 1.21
SEC23A-206ENST00000553970 TMEM88BA6NKF7 163 aa22.57■■□□□ 1.2
SEC23A-206ENST00000553970 PPEF1O14829 653 aaPredicted RBP22.57■■□□□ 1.2
SEC23A-206ENST00000553970 NTSR2O95665 410 aa22.57■■□□□ 1.2
SEC23A-206ENST00000553970 LMOD1P29536 600 aaPredicted RBP22.57■■□□□ 1.2
SEC23A-206ENST00000553970 SUSD4Q5VX71 490 aa22.57■■□□□ 1.2
SEC23A-206ENST00000553970 VPS33BQ9H267 617 aa22.57■■□□□ 1.2
SEC23A-206ENST00000553970 CNTNAP1P78357 1384 aa22.57■■□□□ 1.2
SEC23A-206ENST00000553970 SNED1Q8TER0 1413 aa22.57■■□□□ 1.2
SEC23A-206ENST00000553970 UTP14AQ9BVJ6 771 aaKnown RBP22.56■■□□□ 1.2
SEC23A-206ENST00000553970 MKRN1Q9UHC7 482 aaKnown RBP22.56■■□□□ 1.2
SEC23A-206ENST00000553970 EIF2S2P20042 333 aaKnown RBP22.55■■□□□ 1.2
SEC23A-206ENST00000553970 LARGE2Q8N3Y3 721 aa22.55■■□□□ 1.2
SEC23A-206ENST00000553970 ITGBL1O95965 494 aaPredicted RBP22.53■■□□□ 1.2
SEC23A-206ENST00000553970 TMPOP42166 694 aaKnown RBP22.53■■□□□ 1.2
SEC23A-206ENST00000553970 NIM1KQ8IY84 436 aa22.53■■□□□ 1.2
SEC23A-206ENST00000553970 SUPT20HQ8NEM7 779 aa22.53■■□□□ 1.2
SEC23A-206ENST00000553970 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
SEC23A-206ENST00000553970 CNTROBQ8N137 903 aa22.52■■□□□ 1.2
SEC23A-206ENST00000553970 AIDAQ96BJ3 306 aa22.52■■□□□ 1.2
SEC23A-206ENST00000553970 ADAMTSL1Q8N6G6 1762 aa22.52■■□□□ 1.2
SEC23A-206ENST00000553970 ATP6V0A2Q9Y487 856 aa22.51■■□□□ 1.19
SEC23A-206ENST00000553970 GJA3Q9Y6H8 435 aa22.51■■□□□ 1.19
SEC23A-206ENST00000553970 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
SEC23A-206ENST00000553970 PDIA6Q15084 440 aa22.5■■□□□ 1.19
SEC23A-206ENST00000553970 LRP10Q7Z4F1 713 aa22.5■■□□□ 1.19
SEC23A-206ENST00000553970 PPIP5K2O43314 1243 aa22.49■■□□□ 1.19
SEC23A-206ENST00000553970 BBOX1O75936 387 aa22.49■■□□□ 1.19
SEC23A-206ENST00000553970 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
SEC23A-206ENST00000553970 ANKRD36CQ5JPF3 1778 aa22.48■■□□□ 1.19
SEC23A-206ENST00000553970 USP50Q70EL3 339 aaPredicted RBP22.48■■□□□ 1.19
SEC23A-206ENST00000553970 TMC4Q7Z404 712 aa22.48■■□□□ 1.19
SEC23A-206ENST00000553970 DDX21Q9NR30 783 aaKnown RBP eCLIP22.48■■□□□ 1.19
SEC23A-206ENST00000553970 HOXB7P09629 217 aa22.47■■□□□ 1.19
SEC23A-206ENST00000553970 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
SEC23A-206ENST00000553970 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
SEC23A-206ENST00000553970 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
SEC23A-206ENST00000553970 TCERG1O14776 1098 aaKnown RBP22.46■■□□□ 1.19
SEC23A-206ENST00000553970 TCIRG1Q13488 830 aa22.46■■□□□ 1.19
SEC23A-206ENST00000553970 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
SEC23A-206ENST00000553970 RUNDC1Q96C34 613 aa22.46■■□□□ 1.19
SEC23A-206ENST00000553970 SH3TC1Q8TE82 1336 aa22.46■■□□□ 1.19
SEC23A-206ENST00000553970 CHL1O00533 1208 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 CTCFP49711 727 aaPredicted RBP22.45■■□□□ 1.18
SEC23A-206ENST00000553970 VEGFBP49765 207 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 AIMP1Q12904 312 aaKnown RBP22.45■■□□□ 1.18
SEC23A-206ENST00000553970 PROSER3Q2NL68 480 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 DEFB115Q30KQ5 88 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 DPP8Q6V1X1 898 aaPredicted RBP22.45■■□□□ 1.18
SEC23A-206ENST00000553970 NLRP10Q86W26 655 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 XAGE3Q8WTP9 111 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 RTFDC1Q9BY42 306 aaPredicted RBP22.45■■□□□ 1.18
SEC23A-206ENST00000553970 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 TRMT112Q9UI30 125 aaKnown RBP22.45■■□□□ 1.18
SEC23A-206ENST00000553970 ABCC4O15439 1325 aa22.45■■□□□ 1.18
SEC23A-206ENST00000553970 SCNN1DP51172 638 aa22.44■■□□□ 1.18
SEC23A-206ENST00000553970 NEUROD2Q15784 382 aa22.44■■□□□ 1.18
SEC23A-206ENST00000553970 C3orf67Q6ZVT6 689 aa22.44■■□□□ 1.18
SEC23A-206ENST00000553970 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
SEC23A-206ENST00000553970 ZNRF3Q9ULT6 936 aa22.44■■□□□ 1.18
SEC23A-206ENST00000553970 ABT1Q9ULW3 272 aaKnown RBP22.44■■□□□ 1.18
SEC23A-206ENST00000553970 COL4A5P29400 1685 aa22.43■■□□□ 1.18
SEC23A-206ENST00000553970 CAPN15O75808 1086 aa22.43■■□□□ 1.18
SEC23A-206ENST00000553970 ANXA1P04083 346 aa22.43■■□□□ 1.18
SEC23A-206ENST00000553970 AOC3Q16853 763 aa22.43■■□□□ 1.18
SEC23A-206ENST00000553970 MPNDQ8N594 471 aa22.43■■□□□ 1.18
SEC23A-206ENST00000553970 MAP2K1Q02750 393 aaPredicted RBP22.42■■□□□ 1.18
SEC23A-206ENST00000553970 GRAPQ13588 217 aa22.42■■□□□ 1.18
SEC23A-206ENST00000553970 HDGFL1Q5TGJ6 251 aa22.42■■□□□ 1.18
SEC23A-206ENST00000553970 GRAPLQ8TC17 118 aaPredicted RBP22.42■■□□□ 1.18
SEC23A-206ENST00000553970 NECTIN2Q92692 538 aa22.42■■□□□ 1.18
SEC23A-206ENST00000553970 ADARB2Q9NS39 739 aaKnown RBP22.42■■□□□ 1.18
SEC23A-206ENST00000553970 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
SEC23A-206ENST00000553970 EPS15P42566 896 aa22.41■■□□□ 1.18
SEC23A-206ENST00000553970 TNIP1Q15025 636 aa22.41■■□□□ 1.18
SEC23A-206ENST00000553970 PLBD2Q8NHP8 589 aa22.41■■□□□ 1.18
SEC23A-206ENST00000553970 LAS1LQ9Y4W2 734 aaKnown RBP22.41■■□□□ 1.18
SEC23A-206ENST00000553970 FOXN1O15353 648 aa22.4■■□□□ 1.18
SEC23A-206ENST00000553970 HCLS1P14317 486 aaPredicted RBP22.4■■□□□ 1.18
SEC23A-206ENST00000553970 ECE1P42892 770 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms