RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CRY2Q49AN0 593 aa22.99■■□□□ 1.27
FOXN3-204ENST00000553840 DUSP27Q5VZP5 1158 aa22.99■■□□□ 1.27
FOXN3-204ENST00000553840 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
FOXN3-204ENST00000553840 ABCC12Q96J65 1359 aa22.99■■□□□ 1.27
FOXN3-204ENST00000553840 NTSR2O95665 410 aa22.98■■□□□ 1.27
FOXN3-204ENST00000553840 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
FOXN3-204ENST00000553840 RTKN2Q8IZC4 609 aa22.98■■□□□ 1.27
FOXN3-204ENST00000553840 RBM46Q8TBY0 533 aaKnown RBP22.98■■□□□ 1.27
FOXN3-204ENST00000553840 C7orf43Q8WVR3 580 aa22.98■■□□□ 1.27
FOXN3-204ENST00000553840 UTP14AQ9BVJ6 771 aaKnown RBP22.98■■□□□ 1.27
FOXN3-204ENST00000553840 RNF123Q5XPI4 1314 aa22.98■■□□□ 1.27
FOXN3-204ENST00000553840 NLRP3Q96P20 1036 aa22.97■■□□□ 1.27
FOXN3-204ENST00000553840 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
FOXN3-204ENST00000553840 TCIRG1Q13488 830 aa22.96■■□□□ 1.27
FOXN3-204ENST00000553840 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
FOXN3-204ENST00000553840 RBM17Q96I25 401 aaKnown RBP22.96■■□□□ 1.27
FOXN3-204ENST00000553840 MRS2Q9HD23 443 aa22.96■■□□□ 1.27
FOXN3-204ENST00000553840 HYPKQ9NX55 129 aa22.96■■□□□ 1.27
FOXN3-204ENST00000553840 VEGFAP15692 232 aaPredicted RBP22.95■■□□□ 1.26
FOXN3-204ENST00000553840 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.26
FOXN3-204ENST00000553840 CC2D2BQ6DHV5 1058 aa22.95■■□□□ 1.26
FOXN3-204ENST00000553840 HOXA10P31260 410 aaPredicted RBP22.94■■□□□ 1.26
FOXN3-204ENST00000553840 ANKRD13DQ6ZTN6 518 aa22.94■■□□□ 1.26
FOXN3-204ENST00000553840 PLBD2Q8NHP8 589 aa22.94■■□□□ 1.26
FOXN3-204ENST00000553840 FSTL1Q12841 308 aa22.93■■□□□ 1.26
FOXN3-204ENST00000553840 GRIPAP1Q4V328 841 aa22.93■■□□□ 1.26
FOXN3-204ENST00000553840 SLC10A5Q5PT55 438 aa22.93■■□□□ 1.26
FOXN3-204ENST00000553840 NLRP10Q86W26 655 aa22.93■■□□□ 1.26
FOXN3-204ENST00000553840 CRAMP1Q96RY5 1269 aa22.93■■□□□ 1.26
FOXN3-204ENST00000553840 TMX4Q9H1E5 349 aaPredicted RBP22.93■■□□□ 1.26
FOXN3-204ENST00000553840 TRMT112Q9UI30 125 aaKnown RBP22.92■■□□□ 1.26
FOXN3-204ENST00000553840 WDR90Q96KV7 1748 aa22.91■■□□□ 1.26
FOXN3-204ENST00000553840 APLP1P51693 650 aa22.91■■□□□ 1.26
FOXN3-204ENST00000553840 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
FOXN3-204ENST00000553840 ELL2O00472 640 aaPredicted RBP22.9■■□□□ 1.26
FOXN3-204ENST00000553840 SMC1BQ8NDV3 1235 aa22.9■■□□□ 1.26
FOXN3-204ENST00000553840 SH3TC1Q8TE82 1336 aa22.89■■□□□ 1.26
FOXN3-204ENST00000553840 OLFM4Q6UX06 510 aa22.89■■□□□ 1.25
FOXN3-204ENST00000553840 PSMD1Q99460 953 aa22.89■■□□□ 1.25
FOXN3-204ENST00000553840 PPEF1O14829 653 aaPredicted RBP22.88■■□□□ 1.25
FOXN3-204ENST00000553840 GOLGA2Q08379 1002 aa22.88■■□□□ 1.25
FOXN3-204ENST00000553840 SYNE4Q8N205 404 aa22.88■■□□□ 1.25
FOXN3-204ENST00000553840 ZNF277Q9NRM2 450 aaPredicted RBP22.88■■□□□ 1.25
FOXN3-204ENST00000553840 LAMB2P55268 1798 aa22.88■■□□□ 1.25
FOXN3-204ENST00000553840 IARSP41252 1262 aaKnown RBP22.87■■□□□ 1.25
FOXN3-204ENST00000553840 NCBP3Q53F19 620 aaKnown RBP22.87■■□□□ 1.25
FOXN3-204ENST00000553840 CCDC30Q5VVM6 783 aa22.87■■□□□ 1.25
FOXN3-204ENST00000553840 RIC3Q7Z5B4 369 aa22.87■■□□□ 1.25
FOXN3-204ENST00000553840 C8orf58Q8NAV2 365 aa22.87■■□□□ 1.25
FOXN3-204ENST00000553840 C3orf67Q6ZVT6 689 aa22.86■■□□□ 1.25
FOXN3-204ENST00000553840 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
FOXN3-204ENST00000553840 JDP2Q8WYK2 163 aa22.86■■□□□ 1.25
FOXN3-204ENST00000553840 DDNO94850 711 aaPredicted RBP22.85■■□□□ 1.25
FOXN3-204ENST00000553840 HCLS1P14317 486 aaPredicted RBP22.85■■□□□ 1.25
FOXN3-204ENST00000553840 ISCA1Q9BUE6 129 aa22.85■■□□□ 1.25
FOXN3-204ENST00000553840 ATP5J2-PTCD1G3V325 749 aa22.84■■□□□ 1.25
FOXN3-204ENST00000553840 TCERG1O14776 1098 aaKnown RBP22.84■■□□□ 1.25
FOXN3-204ENST00000553840 DDX58O95786 925 aaKnown RBP22.84■■□□□ 1.25
FOXN3-204ENST00000553840 DDX46Q7L014 1031 aaKnown RBP22.84■■□□□ 1.25
FOXN3-204ENST00000553840 SCN4AP35499 1836 aa22.83■■□□□ 1.25
FOXN3-204ENST00000553840 IQCA1LA6NCM1 817 aa22.83■■□□□ 1.25
FOXN3-204ENST00000553840 BBOX1O75936 387 aa22.83■■□□□ 1.25
FOXN3-204ENST00000553840 ATP6V0A2Q9Y487 856 aa22.83■■□□□ 1.25
FOXN3-204ENST00000553840 ABCC4O15439 1325 aa22.82■■□□□ 1.24
FOXN3-204ENST00000553840 IL16Q14005 1332 aa22.82■■□□□ 1.24
FOXN3-204ENST00000553840 TRIM28Q13263 835 aaKnown RBP22.82■■□□□ 1.24
FOXN3-204ENST00000553840 TSR2Q969E8 191 aaKnown RBP22.82■■□□□ 1.24
FOXN3-204ENST00000553840 STK31Q9BXU1 1019 aa22.82■■□□□ 1.24
FOXN3-204ENST00000553840 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
FOXN3-204ENST00000553840 SNED1Q8TER0 1413 aa22.82■■□□□ 1.24
FOXN3-204ENST00000553840 POTECB2RU33 542 aa22.81■■□□□ 1.24
FOXN3-204ENST00000553840 HSP90B1P14625 803 aaKnown RBP22.81■■□□□ 1.24
FOXN3-204ENST00000553840 DDX60Q8IY21 1712 aaKnown RBP22.81■■□□□ 1.24
FOXN3-204ENST00000553840 SUPT20HQ8NEM7 779 aa22.8■■□□□ 1.24
FOXN3-204ENST00000553840 FAM89AQ96GI7 184 aa22.8■■□□□ 1.24
FOXN3-204ENST00000553840 FZD9O00144 591 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 EIF6P56537 245 aaKnown RBP22.79■■□□□ 1.24
FOXN3-204ENST00000553840 TMC4Q7Z404 712 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 SP8Q8IXZ3 490 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 LARGE2Q8N3Y3 721 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 TSPYL6Q8N831 410 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 ZNF428Q96B54 188 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 L3MBTL3Q96JM7 780 aaPredicted RBP22.79■■□□□ 1.24
FOXN3-204ENST00000553840 VPS33BQ9H267 617 aa22.79■■□□□ 1.24
FOXN3-204ENST00000553840 GRAPQ13588 217 aa22.78■■□□□ 1.24
FOXN3-204ENST00000553840 TWISTNBQ3B726 338 aaPredicted RBP22.78■■□□□ 1.24
FOXN3-204ENST00000553840 GRAPLQ8TC17 118 aaPredicted RBP22.78■■□□□ 1.24
FOXN3-204ENST00000553840 MYD88Q99836 296 aa22.78■■□□□ 1.24
FOXN3-204ENST00000553840 ZNF541Q9H0D2 1346 aa22.78■■□□□ 1.24
FOXN3-204ENST00000553840 WDR63Q8IWG1 891 aa22.77■■□□□ 1.24
FOXN3-204ENST00000553840 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
FOXN3-204ENST00000553840 GPC2Q8N158 579 aa22.77■■□□□ 1.24
FOXN3-204ENST00000553840 CCDC191Q8NCU4 936 aa22.77■■□□□ 1.24
FOXN3-204ENST00000553840 SALL2Q9Y467 1007 aaPredicted RBP22.77■■□□□ 1.24
FOXN3-204ENST00000553840 IRS4O14654 1257 aaPredicted RBP22.76■■□□□ 1.23
FOXN3-204ENST00000553840 SF3B3Q15393 1217 aaKnown RBP22.76■■□□□ 1.23
FOXN3-204ENST00000553840 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
FOXN3-204ENST00000553840 DPP8Q6V1X1 898 aaPredicted RBP22.76■■□□□ 1.23
FOXN3-204ENST00000553840 NIM1KQ8IY84 436 aa22.76■■□□□ 1.23
FOXN3-204ENST00000553840 MPNDQ8N594 471 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 778.6 ms