RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ZBBXA8MT70 800 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 SKIV2LQ15477 1246 aaKnown RBP5.02□□□□□ -1.61
RDH11-204ENST00000553578 PNISRQ8TF01 805 aaKnown RBP5.02□□□□□ -1.61
RDH11-204ENST00000553578 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 CEP170BQ9Y4F5 1589 aaPredicted RBP5.02□□□□□ -1.61
RDH11-204ENST00000553578 CRYBG1Q9Y4K1 1723 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 SH3D19Q5HYK7 790 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 PPP1R18Q6NYC8 613 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 PLEKHG2Q9H7P9 1386 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 ADAMTS7Q9UKP4 1686 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 PLEKHG3A1L390 1219 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 NPHP1O15259 732 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 TCF3P15923 654 aa5.02□□□□□ -1.61
RDH11-204ENST00000553578 ZBTB24O43167 697 aaPredicted RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 CCDC24Q8N4L8 307 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 PRPF38AQ8NAV1 312 aaKnown RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 HELBQ8NG08 1087 aaPredicted RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 SYMPKQ92797 1274 aaKnown RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 ZNF594Q96JF6 807 aaPredicted RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 MAP7D2Q96T17 732 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 PRDM16Q9HAZ2 1276 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 ANKRD36BQ8N2N9 1353 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 LRRC37A3O60309 1634 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 KIF3BO15066 747 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 ANP32CO43423 234 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 ST20-MTHFSA0A0A6YYL1 179 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 MARSP56192 900 aaKnown RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 LMOD3Q0VAK6 560 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 NFKBIBQ15653 356 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 TRMT2AQ8IZ69 625 aaKnown RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 ADGRF5Q8IZF2 1346 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 LMO7Q8WWI1 1683 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 CHMP4CQ96CF2 233 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 DRC1Q96MC2 740 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 CARD11Q9BXL7 1154 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 CDK12Q9NYV4 1490 aaPredicted RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 CGNQ9P2M7 1197 aaKnown RBP5.01□□□□□ -1.61
RDH11-204ENST00000553578 COG6Q9Y2V7 657 aa5.01□□□□□ -1.61
RDH11-204ENST00000553578 NBPF1Q3BBV0 1214 aa5□□□□□ -1.61
RDH11-204ENST00000553578 L1TD1Q5T7N2 865 aaKnown RBP5□□□□□ -1.61
RDH11-204ENST00000553578 VTI1AQ96AJ9 217 aa5□□□□□ -1.61
RDH11-204ENST00000553578 PBXIP1Q96AQ6 731 aa5□□□□□ -1.61
RDH11-204ENST00000553578 ZSWIM4Q9H7M6 989 aa5□□□□□ -1.61
RDH11-204ENST00000553578 ZMYM3Q14202 1370 aa5□□□□□ -1.61
RDH11-204ENST00000553578 A6NJR5 290 aa5□□□□□ -1.61
RDH11-204ENST00000553578 MSS51Q4VC12 460 aa5□□□□□ -1.61
RDH11-204ENST00000553578 PRPF38BQ5VTL8 546 aaKnown RBP5□□□□□ -1.61
RDH11-204ENST00000553578 CCAR1Q8IX12 1150 aaKnown RBP5□□□□□ -1.61
RDH11-204ENST00000553578 PRR7Q8TB68 274 aa5□□□□□ -1.61
RDH11-204ENST00000553578 CAPN10Q9HC96 672 aa5□□□□□ -1.61
RDH11-204ENST00000553578 PCDHGC3Q9UN70 934 aa5□□□□□ -1.61
RDH11-204ENST00000553578 PCDHB15Q9Y5E8 787 aa5□□□□□ -1.61
RDH11-204ENST00000553578 THAP11Q96EK4 314 aa5□□□□□ -1.61
RDH11-204ENST00000553578 LIMD1Q9UGP4 676 aa5□□□□□ -1.61
RDH11-204ENST00000553578 NCOA3Q9Y6Q9 1424 aa5□□□□□ -1.61
RDH11-204ENST00000553578 TRPM3Q9HCF6 1732 aaPredicted RBP5□□□□□ -1.61
RDH11-204ENST00000553578 MAPK8P45983 427 aa5□□□□□ -1.61
RDH11-204ENST00000553578 SERPINB4P48594 390 aa5□□□□□ -1.61
RDH11-204ENST00000553578 MPNDQ8N594 471 aa5□□□□□ -1.61
RDH11-204ENST00000553578 RIMS2Q9UQ26 1411 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 TMEM2Q9UHN6 1383 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 TMF1P82094 1093 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 CABLES1Q8TDN4 633 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 MICAL1Q8TDZ2 1067 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 ZBTB9Q96C00 473 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 ANKARQ7Z5J8 1434 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 AATKQ6ZMQ8 1374 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 RNF223E7ERA6 249 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 BMS1Q14692 1282 aaKnown RBP4.99□□□□□ -1.61
RDH11-204ENST00000553578 ANKLE1Q8NAG6 615 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 FCF1Q9Y324 198 aaKnown RBP4.99□□□□□ -1.61
RDH11-204ENST00000553578 PIK3C2AO00443 1686 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 NCAPD2Q15021 1401 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 JUNDP17535 347 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 HNRNPUQ00839 825 aaKnown RBP eCLIP4.99□□□□□ -1.61
RDH11-204ENST00000553578 PDE3BQ13370 1112 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 FOXD4L6Q3SYB3 417 aaPredicted RBP4.99□□□□□ -1.61
RDH11-204ENST00000553578 FOXD4L3Q6VB84 417 aaPredicted RBP4.99□□□□□ -1.61
RDH11-204ENST00000553578 TMA7Q9Y2S6 64 aaKnown RBP4.99□□□□□ -1.61
RDH11-204ENST00000553578 PPIP5K1Q6PFW1 1433 aa4.99□□□□□ -1.61
RDH11-204ENST00000553578 KIF1AQ12756 1690 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 CTHP32929 405 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 SEMA3FQ13275 785 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 NAALADL2Q58DX5 795 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 FAM160A2Q8N612 972 aaPredicted RBP4.98□□□□□ -1.61
RDH11-204ENST00000553578 SREK1Q8WXA9 508 aaKnown RBP4.98□□□□□ -1.61
RDH11-204ENST00000553578 ATAD2Q6PL18 1390 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 PPEF1O14829 653 aaPredicted RBP4.98□□□□□ -1.61
RDH11-204ENST00000553578 SH3BP5O60239 455 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 BRD1O95696 1058 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 XPCQ01831 940 aaPredicted RBP4.98□□□□□ -1.61
RDH11-204ENST00000553578 GPATCH11Q8N954 259 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 PRDM9Q9NQV7 894 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 SETD1BQ9UPS6 1966 aaKnown RBP4.98□□□□□ -1.61
RDH11-204ENST00000553578 VIRMAQ69YN4 1812 aaKnown RBP4.98□□□□□ -1.61
RDH11-204ENST00000553578 RAPGEF3O95398 923 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 SCNN1AP37088 669 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 RAB15P59190 212 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 DMTNQ08495 405 aa4.98□□□□□ -1.61
RDH11-204ENST00000553578 TUSC1Q2TAM9 212 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms