RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 A1BGP04217 495 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 PSMA5P28066 241 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 DDIT3P35638 169 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 IL15P40933 162 aaPredicted RBP12.3□□□□□ -0.44
CNOT2-243ENST00000553078 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
CNOT2-243ENST00000553078 ARXQ96QS3 562 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
CNOT2-243ENST00000553078 FPGT-TNNI3KV9GXZ4 949 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 TOGARAM1Q9Y4F4 1720 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
CNOT2-243ENST00000553078 A0A0G2JS52 829 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 SASH1O94885 1247 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 CD2BP2O95400 341 aaKnown RBP12.29□□□□□ -0.44
CNOT2-243ENST00000553078 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
CNOT2-243ENST00000553078 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
CNOT2-243ENST00000553078 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
CNOT2-243ENST00000553078 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
CNOT2-243ENST00000553078 KAZALD1Q96I82 304 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 AKAP2Q9Y2D5 859 aa12.29□□□□□ -0.44
CNOT2-243ENST00000553078 TRAK2O60296 914 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 CIAO1O76071 339 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 ATP5JP18859 108 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 PTPN12Q05209 780 aaKnown RBP12.28□□□□□ -0.44
CNOT2-243ENST00000553078 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 DDB1Q16531 1140 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 PIGBQ92521 554 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
CNOT2-243ENST00000553078 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
CNOT2-243ENST00000553078 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
CNOT2-243ENST00000553078 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 MAP3K15Q6ZN16 1313 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 BCL9O00512 1426 aa12.28□□□□□ -0.44
CNOT2-243ENST00000553078 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-243ENST00000553078 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-243ENST00000553078 TFCP2Q12800 502 aa12.27□□□□□ -0.45
CNOT2-243ENST00000553078 KRT32Q14532 448 aa12.27□□□□□ -0.45
CNOT2-243ENST00000553078 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.45
CNOT2-243ENST00000553078 TMX3Q96JJ7 454 aa12.27□□□□□ -0.45
CNOT2-243ENST00000553078 ZSCAN31Q96LW9 406 aaPredicted RBP12.27□□□□□ -0.45
CNOT2-243ENST00000553078 LSG1Q9H089 658 aaKnown RBP12.27□□□□□ -0.45
CNOT2-243ENST00000553078 GOLGA6L3A6NEY3 463 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 EYA2O00167 538 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 CASP7P55210 303 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
CNOT2-243ENST00000553078 ANKRD1Q15327 319 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 EPHA10Q5JZY3 1008 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 GORABQ5T7V8 394 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 DNAJC2Q99543 621 aaKnown RBP12.26□□□□□ -0.45
CNOT2-243ENST00000553078 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
CNOT2-243ENST00000553078 TJP1Q07157 1748 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 ADAMTS2O95450 1211 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 NCLP19338 710 aaKnown RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 SSFA2P28290 1259 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 CUL4AQ13619 759 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 ZBTB38Q8NAP3 1195 aaPredicted RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 KLHDC4Q8TBB5 520 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 NEUROD6Q96NK8 337 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 SH2B1Q9NRF2 756 aaPredicted RBP12.25□□□□□ -0.45
CNOT2-243ENST00000553078 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 CDHR2Q9BYE9 1310 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 ZNF609O15014 1411 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
CNOT2-243ENST00000553078 CASTP20810 708 aaKnown RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 FOXO4P98177 505 aa12.24□□□□□ -0.45
CNOT2-243ENST00000553078 IFIT5Q13325 482 aaKnown RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 PRPF40BQ6NWY9 871 aaKnown RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
CNOT2-243ENST00000553078 NOL8Q76FK4 1167 aaKnown RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
CNOT2-243ENST00000553078 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
CNOT2-243ENST00000553078 JARID2Q92833 1246 aaPredicted RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
CNOT2-243ENST00000553078 HAUS7Q99871 368 aa12.24□□□□□ -0.45
CNOT2-243ENST00000553078 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
CNOT2-243ENST00000553078 UPF3BQ9BZI7 483 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms