RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 WDR33Q9C0J8 1336 aaKnown RBP14.84□□□□□ -0.03
TMEM116-218ENST00000552839 LTBP1Q14766 1721 aa14.83□□□□□ -0.03
TMEM116-218ENST00000552839 TRPM7Q96QT4 1865 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 NBPF26B4DH59 902 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 APAF1O14727 1248 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 SNRPA1P09661 255 aaKnown RBP14.83□□□□□ -0.04
TMEM116-218ENST00000552839 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 RIPK4P57078 832 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 NBPF10Q6P3W6 841 aaKnown RBP14.83□□□□□ -0.04
TMEM116-218ENST00000552839 NBPF15Q8N660 670 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 SNED1Q8TER0 1413 aa14.83□□□□□ -0.04
TMEM116-218ENST00000552839 COL4A5P29400 1685 aa14.82□□□□□ -0.04
TMEM116-218ENST00000552839 MAP2K1Q02750 393 aaPredicted RBP14.82□□□□□ -0.04
TMEM116-218ENST00000552839 HLFQ16534 295 aa14.82□□□□□ -0.04
TMEM116-218ENST00000552839 GPC2Q8N158 579 aa14.82□□□□□ -0.04
TMEM116-218ENST00000552839 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
TMEM116-218ENST00000552839 ABT1Q9ULW3 272 aaKnown RBP14.82□□□□□ -0.04
TMEM116-218ENST00000552839 SALL2Q9Y467 1007 aaPredicted RBP14.82□□□□□ -0.04
TMEM116-218ENST00000552839 NUP98P52948 1817 aa14.81□□□□□ -0.04
TMEM116-218ENST00000552839 SLC34A2O95436 690 aa14.81□□□□□ -0.04
TMEM116-218ENST00000552839 TMPOP42166 694 aaKnown RBP14.81□□□□□ -0.04
TMEM116-218ENST00000552839 FMR1Q06787 632 aaKnown RBP eCLIP14.81□□□□□ -0.04
TMEM116-218ENST00000552839 FAM161AQ3B820 660 aa14.81□□□□□ -0.04
TMEM116-218ENST00000552839 PSMD1Q99460 953 aa14.81□□□□□ -0.04
TMEM116-218ENST00000552839 DDX21Q9NR30 783 aaKnown RBP eCLIP14.81□□□□□ -0.04
TMEM116-218ENST00000552839 THSD7BQ9C0I4 1608 aa14.81□□□□□ -0.04
TMEM116-218ENST00000552839 RGL2O15211 777 aa14.8□□□□□ -0.04
TMEM116-218ENST00000552839 MCM10Q7L590 875 aa14.8□□□□□ -0.04
TMEM116-218ENST00000552839 JDP2Q8WYK2 163 aa14.8□□□□□ -0.04
TMEM116-218ENST00000552839 GTF2E1P29083 439 aaPredicted RBP14.79□□□□□ -0.04
TMEM116-218ENST00000552839 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
TMEM116-218ENST00000552839 CALD1Q05682 793 aaKnown RBP14.79□□□□□ -0.04
TMEM116-218ENST00000552839 CRY2Q49AN0 593 aa14.79□□□□□ -0.04
TMEM116-218ENST00000552839 GJA3Q9Y6H8 435 aa14.79□□□□□ -0.04
TMEM116-218ENST00000552839 DLG5Q8TDM6 1919 aa14.78□□□□□ -0.04
TMEM116-218ENST00000552839 LAMB4A4D0S4 1761 aa14.78□□□□□ -0.04
TMEM116-218ENST00000552839 ABCC12Q96J65 1359 aa14.78□□□□□ -0.04
TMEM116-218ENST00000552839 HTATSF1O43719 755 aaKnown RBP14.78□□□□□ -0.04
TMEM116-218ENST00000552839 EPS15P42566 896 aa14.78□□□□□ -0.04
TMEM116-218ENST00000552839 EIF6P56537 245 aaKnown RBP14.78□□□□□ -0.04
TMEM116-218ENST00000552839 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
TMEM116-218ENST00000552839 NUTM1Q86Y26 1132 aa14.78□□□□□ -0.04
TMEM116-218ENST00000552839 LMOD1P29536 600 aaPredicted RBP14.77□□□□□ -0.05
TMEM116-218ENST00000552839 SCNN1DP51172 638 aa14.77□□□□□ -0.05
TMEM116-218ENST00000552839 CYP4F22Q6NT55 531 aa14.77□□□□□ -0.05
TMEM116-218ENST00000552839 NGEFQ8N5V2 710 aa14.77□□□□□ -0.05
TMEM116-218ENST00000552839 CAPNS2Q96L46 248 aa14.77□□□□□ -0.05
TMEM116-218ENST00000552839 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.05
TMEM116-218ENST00000552839 GRM1Q13255 1194 aa14.76□□□□□ -0.05
TMEM116-218ENST00000552839 CST9Q5W186 159 aa14.76□□□□□ -0.05
TMEM116-218ENST00000552839 CC2D2BQ6DHV5 1058 aa14.76□□□□□ -0.05
TMEM116-218ENST00000552839 PAXIP1Q6ZW49 1069 aaPredicted RBP14.76□□□□□ -0.05
TMEM116-218ENST00000552839 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
TMEM116-218ENST00000552839 GPR101Q96P66 508 aaPredicted RBP14.76□□□□□ -0.05
TMEM116-218ENST00000552839 CCDC85CA6NKD9 419 aa14.75□□□□□ -0.05
TMEM116-218ENST00000552839 TRAF5O00463 557 aa14.75□□□□□ -0.05
TMEM116-218ENST00000552839 ECE1P42892 770 aa14.75□□□□□ -0.05
TMEM116-218ENST00000552839 LARGE2Q8N3Y3 721 aa14.75□□□□□ -0.05
TMEM116-218ENST00000552839 NYXQ9GZU5 481 aa14.75□□□□□ -0.05
TMEM116-218ENST00000552839 LAS1LQ9Y4W2 734 aaKnown RBP14.75□□□□□ -0.05
TMEM116-218ENST00000552839 HOXA10P31260 410 aaPredicted RBP14.74□□□□□ -0.05
TMEM116-218ENST00000552839 USP50Q70EL3 339 aaPredicted RBP14.74□□□□□ -0.05
TMEM116-218ENST00000552839 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
TMEM116-218ENST00000552839 BEGAINQ9BUH8 593 aa14.74□□□□□ -0.05
TMEM116-218ENST00000552839 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
TMEM116-218ENST00000552839 TLL2Q9Y6L7 1015 aa14.74□□□□□ -0.05
TMEM116-218ENST00000552839 CASP8AP2Q9UKL3 1982 aa14.74□□□□□ -0.05
TMEM116-218ENST00000552839 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
TMEM116-218ENST00000552839 RGS19P49795 217 aa14.73□□□□□ -0.05
TMEM116-218ENST00000552839 TAF7Q15545 349 aaPredicted RBP14.73□□□□□ -0.05
TMEM116-218ENST00000552839 THUMPD2Q9BTF0 503 aaKnown RBP14.73□□□□□ -0.05
TMEM116-218ENST00000552839 TSKSQ9UJT2 592 aa14.73□□□□□ -0.05
TMEM116-218ENST00000552839 RIC1Q4ADV7 1423 aa14.73□□□□□ -0.05
TMEM116-218ENST00000552839 MAP3K15Q6ZN16 1313 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 UBN2Q6ZU65 1347 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 TCERG1O14776 1098 aaKnown RBP14.72□□□□□ -0.05
TMEM116-218ENST00000552839 AOC2O75106 756 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 MLLT1Q03111 559 aaPredicted RBP14.72□□□□□ -0.05
TMEM116-218ENST00000552839 GRIPAP1Q4V328 841 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 TTLL7Q6ZT98 887 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 CRAMP1Q96RY5 1269 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 KDM3BQ7LBC6 1761 aa14.72□□□□□ -0.05
TMEM116-218ENST00000552839 GPTP24298 496 aa14.71□□□□□ -0.05
TMEM116-218ENST00000552839 MAP2K2P36507 400 aa14.71□□□□□ -0.05
TMEM116-218ENST00000552839 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
TMEM116-218ENST00000552839 SUSD4Q5VX71 490 aa14.71□□□□□ -0.05
TMEM116-218ENST00000552839 NIM1KQ8IY84 436 aa14.71□□□□□ -0.05
TMEM116-218ENST00000552839 PPEF1O14829 653 aaPredicted RBP14.7□□□□□ -0.06
TMEM116-218ENST00000552839 AOC3Q16853 763 aa14.7□□□□□ -0.06
TMEM116-218ENST00000552839 C3orf67Q6ZVT6 689 aa14.7□□□□□ -0.06
TMEM116-218ENST00000552839 RBM17Q96I25 401 aaKnown RBP14.7□□□□□ -0.06
TMEM116-218ENST00000552839 GPRC5DQ9NZD1 345 aa14.7□□□□□ -0.06
TMEM116-218ENST00000552839 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
TMEM116-218ENST00000552839 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
TMEM116-218ENST00000552839 IBTKQ9P2D0 1353 aaPredicted RBP14.7□□□□□ -0.06
TMEM116-218ENST00000552839 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
TMEM116-218ENST00000552839 GNAI1P63096 354 aa14.69□□□□□ -0.06
TMEM116-218ENST00000552839 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
TMEM116-218ENST00000552839 KIF6Q6ZMV9 814 aa14.69□□□□□ -0.06
TMEM116-218ENST00000552839 SAPCD2Q86UD0 394 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms