RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KDM2BQ8NHM5 1336 aa9.21□□□□□ -0.94
PRPF40B-214ENST00000551320 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 DDNO94850 711 aaPredicted RBP9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 CAMTA2O94983 1202 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 STARD3NLO95772 234 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 LMNB1P20700 586 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 PDE4AP27815 886 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 LARP6Q9BRS8 491 aaKnown RBP9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 CRISPLD2Q9H0B8 497 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 HEG1Q9ULI3 1381 aa9.2□□□□□ -0.94
PRPF40B-214ENST00000551320 UBR2Q8IWV8 1755 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 SLX4Q8IY92 1834 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 CACNA1SQ13698 1873 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 GLTPD2A6NH11 291 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 NBPF26B4DH59 902 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 G3V3G9 751 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 NPHP1O15259 732 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 NBPF10Q6P3W6 841 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 NBPF15Q8N660 670 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 NRXN2Q9P2S2 1712 aa9.19□□□□□ -0.94
PRPF40B-214ENST00000551320 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 U2AF1L5P0DN76 240 aaPredicted RBP9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 U2AF1Q01081 240 aaKnown RBP eCLIP9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 HLFQ16534 295 aa9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-214ENST00000551320 TIAM2Q8IVF5 1701 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 VEGFAP15692 232 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 PPP2R1AP30153 589 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 FSTL1Q12841 308 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 CNBD1Q8NA66 436 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 GAS2L2Q8NHY3 880 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 SETDB2Q96T68 719 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 ZNF277Q9NRM2 450 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 SIPA1L3O60292 1781 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-214ENST00000551320 ZNF541Q9H0D2 1346 aa9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 NBR1Q14596 966 aa9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 NBPF5PQ86XG9 351 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 L3MBTL3Q96JM7 780 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 DLEC1Q9Y238 1755 aa9.16□□□□□ -0.94
PRPF40B-214ENST00000551320 CEMIPQ8WUJ3 1361 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 A0A087WZG4 1122 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 HSPA1AP0DMV8 641 aaKnown RBP9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 HSPA1BP0DMV9 641 aaKnown RBP9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 SRGNP10124 158 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 PDE6BP35913 854 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 IL6STP40189 918 aaPredicted RBP9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 MFSD10Q14728 455 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 JMYQ8N9B5 988 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 SCN7AQ01118 1682 aa9.15□□□□□ -0.94
PRPF40B-214ENST00000551320 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 ANXA1P04083 346 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 MYL6BP14649 208 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 GPTP24298 496 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 E2F4Q16254 413 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 TTLL7Q6ZT98 887 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 TNS4Q8IZW8 715 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 TAOK3Q9H2K8 898 aa9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 NIP7Q9Y221 180 aaKnown RBP eCLIP9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
PRPF40B-214ENST00000551320 ST5P78524 1137 aa9.13□□□□□ -0.95
PRPF40B-214ENST00000551320 C7orf43Q8WVR3 580 aa9.13□□□□□ -0.95
PRPF40B-214ENST00000551320 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
PRPF40B-214ENST00000551320 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
PRPF40B-214ENST00000551320 FER1L6Q2WGJ9 1857 aa9.13□□□□□ -0.95
PRPF40B-214ENST00000551320 ABCC12Q96J65 1359 aa9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 SNRPA1P09661 255 aaKnown RBP9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 STYK1Q6J9G0 422 aa9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 NPM2Q86SE8 214 aaKnown RBP9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 TMC2Q8TDI7 906 aa9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 MASTLQ96GX5 879 aa9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 CFAP53Q96M91 514 aa9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 TEX13AQ9BXU3 409 aaPredicted RBP9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 COL4A5P29400 1685 aa9.12□□□□□ -0.95
PRPF40B-214ENST00000551320 RNF123Q5XPI4 1314 aa9.11□□□□□ -0.95
PRPF40B-214ENST00000551320 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
PRPF40B-214ENST00000551320 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
PRPF40B-214ENST00000551320 SYNE4Q8N205 404 aa9.11□□□□□ -0.95
PRPF40B-214ENST00000551320 CNKSR1Q969H4 720 aa9.11□□□□□ -0.95
PRPF40B-214ENST00000551320 BCORQ6W2J9 1755 aa9.11□□□□□ -0.95
PRPF40B-214ENST00000551320 UBN2Q6ZU65 1347 aa9.1□□□□□ -0.95
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