RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TUBGCP6Q96RT7 1819 aa24.23■■□□□ 1.47
SSH1-209ENST00000551165 SYNE4Q8N205 404 aa24.23■■□□□ 1.47
SSH1-209ENST00000551165 IL6STP40189 918 aaPredicted RBP24.22■■□□□ 1.47
SSH1-209ENST00000551165 PTPN12Q05209 780 aaKnown RBP24.22■■□□□ 1.47
SSH1-209ENST00000551165 DDRGK1Q96HY6 314 aa24.22■■□□□ 1.47
SSH1-209ENST00000551165 MYH14Q7Z406 1995 aaKnown RBP24.22■■□□□ 1.47
SSH1-209ENST00000551165 G3BP1Q13283 466 aaKnown RBP eCLIP24.22■■□□□ 1.47
SSH1-209ENST00000551165 DZIP3Q86Y13 1208 aaKnown RBP24.22■■□□□ 1.47
SSH1-209ENST00000551165 CCDC87Q9NVE4 849 aa24.22■■□□□ 1.47
SSH1-209ENST00000551165 PI4K2BQ8TCG2 481 aa24.21■■□□□ 1.47
SSH1-209ENST00000551165 FAM89AQ96GI7 184 aa24.21■■□□□ 1.47
SSH1-209ENST00000551165 MAP4K4O95819 1239 aaPredicted RBP24.21■■□□□ 1.47
SSH1-209ENST00000551165 EIF5P55010 431 aaKnown RBP24.21■■□□□ 1.47
SSH1-209ENST00000551165 CHMP3Q9Y3E7 222 aa24.21■■□□□ 1.47
SSH1-209ENST00000551165 TRIM28Q13263 835 aaKnown RBP24.2■■□□□ 1.46
SSH1-209ENST00000551165 CLASRPQ8N2M8 674 aaKnown RBP24.2■■□□□ 1.46
SSH1-209ENST00000551165 COPRSQ9NQ92 184 aa24.2■■□□□ 1.46
SSH1-209ENST00000551165 ERC1Q8IUD2 1116 aa24.19■■□□□ 1.46
SSH1-209ENST00000551165 EAF2Q96CJ1 260 aaPredicted RBP24.19■■□□□ 1.46
SSH1-209ENST00000551165 ATRNO75882 1429 aa24.18■■□□□ 1.46
SSH1-209ENST00000551165 SMARCC1Q92922 1105 aaPredicted RBP24.18■■□□□ 1.46
SSH1-209ENST00000551165 RILPL2Q969X0 211 aa24.18■■□□□ 1.46
SSH1-209ENST00000551165 TRIM6-TRIM34B2RNG4 842 aa24.18■■□□□ 1.46
SSH1-209ENST00000551165 AACSQ86V21 672 aa24.18■■□□□ 1.46
SSH1-209ENST00000551165 NLRP10Q86W26 655 aa24.18■■□□□ 1.46
SSH1-209ENST00000551165 TLR7Q9NYK1 1049 aaKnown RBP24.17■■□□□ 1.46
SSH1-209ENST00000551165 LINC00116Q8NCU8 138 aa24.17■■□□□ 1.46
SSH1-209ENST00000551165 CCDC8Q9H0W5 538 aaPredicted RBP24.17■■□□□ 1.46
SSH1-209ENST00000551165 NUP98P52948 1817 aa24.17■■□□□ 1.46
SSH1-209ENST00000551165 SMIM5Q71RC9 77 aa24.16■■□□□ 1.46
SSH1-209ENST00000551165 TRPC5Q9UL62 973 aaPredicted RBP24.16■■□□□ 1.46
SSH1-209ENST00000551165 EP400Q96L91 3159 aa24.16■■□□□ 1.46
SSH1-209ENST00000551165 SEPT12Q8IYM1 358 aa24.16■■□□□ 1.46
SSH1-209ENST00000551165 CCDC85AQ96PX6 553 aaPredicted RBP24.16■■□□□ 1.46
SSH1-209ENST00000551165 AOX1Q06278 1338 aa24.16■■□□□ 1.46
SSH1-209ENST00000551165 ZNF594Q96JF6 807 aaPredicted RBP24.15■■□□□ 1.46
SSH1-209ENST00000551165 UBN2Q6ZU65 1347 aa24.15■■□□□ 1.46
SSH1-209ENST00000551165 ONECUT3O60422 494 aaPredicted RBP24.15■■□□□ 1.46
SSH1-209ENST00000551165 PCCAP05165 728 aaPredicted RBP24.15■■□□□ 1.46
SSH1-209ENST00000551165 ZBTB38Q8NAP3 1195 aaPredicted RBP24.15■■□□□ 1.46
SSH1-209ENST00000551165 QTRT2Q9H974 415 aaKnown RBP24.15■■□□□ 1.46
SSH1-209ENST00000551165 IFIT2P09913 472 aaKnown RBP24.14■■□□□ 1.46
SSH1-209ENST00000551165 RBM25P49756 843 aaKnown RBP24.14■■□□□ 1.46
SSH1-209ENST00000551165 TFCP2Q12800 502 aa24.14■■□□□ 1.46
SSH1-209ENST00000551165 RREB1Q92766 1687 aa24.14■■□□□ 1.45
SSH1-209ENST00000551165 ERVV-1B6SEH8 477 aa24.14■■□□□ 1.45
SSH1-209ENST00000551165 ERICH6Q7L0X2 663 aa24.14■■□□□ 1.45
SSH1-209ENST00000551165 USP42Q9H9J4 1324 aaKnown RBP24.13■■□□□ 1.45
SSH1-209ENST00000551165 BTAF1O14981 1849 aa24.13■■□□□ 1.45
SSH1-209ENST00000551165 CICQ96RK0 1608 aaPredicted RBP24.13■■□□□ 1.45
SSH1-209ENST00000551165 COL5A3P25940 1745 aaPredicted RBP24.13■■□□□ 1.45
SSH1-209ENST00000551165 ANKRD36CQ5JPF3 1778 aa24.12■■□□□ 1.45
SSH1-209ENST00000551165 CAMTA2O94983 1202 aa24.11■■□□□ 1.45
SSH1-209ENST00000551165 HSP90AB3PQ58FF7 597 aa24.11■■□□□ 1.45
SSH1-209ENST00000551165 ZNF34Q8IZ26 560 aa24.11■■□□□ 1.45
SSH1-209ENST00000551165 KIF2CQ99661 725 aa24.11■■□□□ 1.45
SSH1-209ENST00000551165 ECHDC1Q9NTX5 307 aa24.11■■□□□ 1.45
SSH1-209ENST00000551165 ATG9AQ7Z3C6 839 aa24.11■■□□□ 1.45
SSH1-209ENST00000551165 CHMLP26374 656 aa24.1■■□□□ 1.45
SSH1-209ENST00000551165 LRRC24Q50LG9 513 aa24.1■■□□□ 1.45
SSH1-209ENST00000551165 TTC41PQ6P2S7 1318 aa24.1■■□□□ 1.45
SSH1-209ENST00000551165 PUS3Q9BZE2 481 aaKnown RBP24.1■■□□□ 1.45
SSH1-209ENST00000551165 NHSQ6T4R5 1651 aa24.1■■□□□ 1.45
SSH1-209ENST00000551165 CASC1Q6TDU7 716 aa24.09■■□□□ 1.45
SSH1-209ENST00000551165 USP26Q9BXU7 913 aa24.09■■□□□ 1.45
SSH1-209ENST00000551165 IL25Q9H293 177 aa24.09■■□□□ 1.45
SSH1-209ENST00000551165 TRMT112Q9UI30 125 aaKnown RBP24.09■■□□□ 1.45
SSH1-209ENST00000551165 FAM177BA6PVY3 158 aa24.09■■□□□ 1.45
SSH1-209ENST00000551165 GLRX3O76003 335 aaKnown RBP24.08■■□□□ 1.44
SSH1-209ENST00000551165 TNNI3KQ59H18 835 aa24.08■■□□□ 1.44
SSH1-209ENST00000551165 SUSD4Q5VX71 490 aa24.08■■□□□ 1.44
SSH1-209ENST00000551165 TBC1D2Q9BYX2 928 aa24.08■■□□□ 1.44
SSH1-209ENST00000551165 FPGT-TNNI3KV9GXZ4 949 aa24.08■■□□□ 1.44
SSH1-209ENST00000551165 PLA2G12BQ9BX93 195 aa24.07■■□□□ 1.44
SSH1-209ENST00000551165 CSF1RP07333 972 aa24.07■■□□□ 1.44
SSH1-209ENST00000551165 ESYT1Q9BSJ8 1104 aa24.07■■□□□ 1.44
SSH1-209ENST00000551165 DAXXQ9UER7 740 aaPredicted RBP24.07■■□□□ 1.44
SSH1-209ENST00000551165 DBNLQ9UJU6 430 aaKnown RBP24.07■■□□□ 1.44
SSH1-209ENST00000551165 SBF2Q86WG5 1849 aa24.06■■□□□ 1.44
SSH1-209ENST00000551165 IRS4O14654 1257 aaPredicted RBP24.06■■□□□ 1.44
SSH1-209ENST00000551165 ERC2O15083 957 aa24.06■■□□□ 1.44
SSH1-209ENST00000551165 ZNF831Q5JPB2 1677 aa24.06■■□□□ 1.44
SSH1-209ENST00000551165 CDHR2Q9BYE9 1310 aa24.06■■□□□ 1.44
SSH1-209ENST00000551165 AK9Q5TCS8 1911 aa24.05■■□□□ 1.44
SSH1-209ENST00000551165 CCDC57Q2TAC2 916 aa24.05■■□□□ 1.44
SSH1-209ENST00000551165 AMIGO3Q86WK7 504 aa24.05■■□□□ 1.44
SSH1-209ENST00000551165 TTLL11Q8NHH1 800 aa24.05■■□□□ 1.44
SSH1-209ENST00000551165 EYA2O00167 538 aa24.04■■□□□ 1.44
SSH1-209ENST00000551165 DBNDD2Q9BQY9 259 aa24.04■■□□□ 1.44
SSH1-209ENST00000551165 BOLA2Q9H3K6 86 aa24.04■■□□□ 1.44
SSH1-209ENST00000551165 GREM2Q9H772 168 aa24.04■■□□□ 1.44
SSH1-209ENST00000551165 GPATCH3Q96I76 525 aa24.03■■□□□ 1.44
SSH1-209ENST00000551165 CCNL1Q9UK58 526 aaPredicted RBP24.03■■□□□ 1.44
SSH1-209ENST00000551165 CNTROBQ8N137 903 aa24.03■■□□□ 1.44
SSH1-209ENST00000551165 CTSWP56202 376 aa24.02■■□□□ 1.44
SSH1-209ENST00000551165 HCLS1P14317 486 aaPredicted RBP24.02■■□□□ 1.44
SSH1-209ENST00000551165 TIMM10P62072 90 aa24.02■■□□□ 1.44
SSH1-209ENST00000551165 NIP7Q9Y221 180 aaKnown RBP eCLIP24.02■■□□□ 1.44
SSH1-209ENST00000551165 CNTNAP4Q9C0A0 1308 aa24.02■■□□□ 1.44
SSH1-209ENST00000551165 IL15P40933 162 aaPredicted RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms