RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
NR4A1-215ENST00000550557 EPS15P42566 896 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 DNAJC10Q8IXB1 793 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 BCS1LQ9Y276 419 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 HECW2Q9P2P5 1572 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 TNIP1Q15025 636 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 CRNKL1Q9BZJ0 848 aaKnown RBP14.35□□□□□ -0.11
NR4A1-215ENST00000550557 ZHX3Q9H4I2 956 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 SH3TC1Q8TE82 1336 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
NR4A1-215ENST00000550557 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
NR4A1-215ENST00000550557 METP08581 1390 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.34□□□□□ -0.11
NR4A1-215ENST00000550557 LARGE2Q8N3Y3 721 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 BEGAINQ9BUH8 593 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 ECHDC1Q9NTX5 307 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 SPHKAPQ2M3C7 1700 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 STK38Q15208 465 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 TNNQ9UQP3 1299 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 ZNF213O14771 459 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 PDE4BQ07343 736 aa14.34□□□□□ -0.11
NR4A1-215ENST00000550557 TBC1D2Q9BYX2 928 aa14.33□□□□□ -0.11
NR4A1-215ENST00000550557 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.11
NR4A1-215ENST00000550557 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.11
NR4A1-215ENST00000550557 KIAA0232Q92628 1395 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 ZNF521Q96K83 1311 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.12
NR4A1-215ENST00000550557 JMYQ8N9B5 988 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 CUL5Q93034 780 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
NR4A1-215ENST00000550557 CLASP1Q7Z460 1538 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.12
NR4A1-215ENST00000550557 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
NR4A1-215ENST00000550557 UNC5CLQ8IV45 518 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 SEPT12Q8IYM1 358 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 ZNF408Q9H9D4 720 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 K7ELQ4 463 aaPredicted RBP14.32□□□□□ -0.12
NR4A1-215ENST00000550557 C8orf58Q8NAV2 365 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 SCLT1Q96NL6 688 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 SSBP05455 408 aaKnown RBP eCLIP14.32□□□□□ -0.12
NR4A1-215ENST00000550557 SLC4A8Q2Y0W8 1093 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 HELBQ8NG08 1087 aaPredicted RBP14.32□□□□□ -0.12
NR4A1-215ENST00000550557 WASF1Q92558 559 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 TBC1D32Q96NH3 1257 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 TSPY2A6NKD2 308 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 TRMT2AQ8IZ69 625 aaKnown RBP14.32□□□□□ -0.12
NR4A1-215ENST00000550557 GOLGA6L1Q8N7Z2 621 aa14.32□□□□□ -0.12
NR4A1-215ENST00000550557 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
NR4A1-215ENST00000550557 ERVV-2B6SEH9 535 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 A1BGP04217 495 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 CYP7A1P22680 504 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 PICALMQ13492 652 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 FAM182BQ5T319 152 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 LAMC1P11047 1609 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 MADDQ8WXG6 1647 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 TNNI2P48788 182 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
NR4A1-215ENST00000550557 UFL1O94874 794 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 BMP2KLQ5H9B9 411 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 CCDC173Q0VFZ6 552 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 CT47A1Q5JQC4 288 aaPredicted RBP14.31□□□□□ -0.12
NR4A1-215ENST00000550557 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 BRINP3Q76B58 766 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
NR4A1-215ENST00000550557 OFD1O75665 1012 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 DPP8Q6V1X1 898 aaPredicted RBP14.3□□□□□ -0.12
NR4A1-215ENST00000550557 MRPL50Q8N5N7 158 aaKnown RBP14.3□□□□□ -0.12
NR4A1-215ENST00000550557 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
NR4A1-215ENST00000550557 BMP2KQ9NSY1 1161 aaPredicted RBP14.3□□□□□ -0.12
NR4A1-215ENST00000550557 SUPT20HQ8NEM7 779 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 CARD10Q9BWT7 1032 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 LGR6Q9HBX8 967 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 NUCB1Q02818 461 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 E9PCH4 1651 aa14.3□□□□□ -0.12
NR4A1-215ENST00000550557 CWF19L2Q2TBE0 894 aaKnown RBP14.29□□□□□ -0.12
NR4A1-215ENST00000550557 ABCC3O15438 1527 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
NR4A1-215ENST00000550557 CAVIN1Q6NZI2 390 aaKnown RBP14.29□□□□□ -0.12
NR4A1-215ENST00000550557 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 AFF2P51816 1311 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 IFIT3O14879 490 aaKnown RBP14.29□□□□□ -0.12
NR4A1-215ENST00000550557 VAMP4O75379 141 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 CEBPZQ03701 1054 aaKnown RBP14.29□□□□□ -0.12
NR4A1-215ENST00000550557 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 NLGN1Q8N2Q7 840 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 MPHOSPH6Q99547 160 aaKnown RBP14.29□□□□□ -0.12
NR4A1-215ENST00000550557 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 ABCA9Q8IUA7 1624 aa14.29□□□□□ -0.12
NR4A1-215ENST00000550557 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 PDE6BP35913 854 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 ARHGAP27Q6ZUM4 889 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 PAF1Q8N7H5 531 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 GGA1Q9UJY5 639 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms