RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 CCDC191Q8NCU4 936 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 SSH1Q8WYL5 1049 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 FER1L6Q2WGJ9 1857 aa15.24■□□□□ 0.03
PFDN5-208ENST00000549995 PTPRCP08575 1304 aa15.23■□□□□ 0.03
PFDN5-208ENST00000549995 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
PFDN5-208ENST00000549995 IGKV5-2P06315 115 aa15.23■□□□□ 0.03
PFDN5-208ENST00000549995 KLHL34Q8N239 644 aa15.23■□□□□ 0.03
PFDN5-208ENST00000549995 UTP14AQ9BVJ6 771 aaKnown RBP15.23■□□□□ 0.03
PFDN5-208ENST00000549995 MAP3K2Q9Y2U5 619 aa15.23■□□□□ 0.03
PFDN5-208ENST00000549995 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
PFDN5-208ENST00000549995 SLX4Q8IY92 1834 aa15.22■□□□□ 0.03
PFDN5-208ENST00000549995 UTRNP46939 3433 aa15.22■□□□□ 0.03
PFDN5-208ENST00000549995 SRGNP10124 158 aa15.22■□□□□ 0.03
PFDN5-208ENST00000549995 ERFEQ4G0M1 354 aa15.22■□□□□ 0.03
PFDN5-208ENST00000549995 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
PFDN5-208ENST00000549995 SNED1Q8TER0 1413 aa15.21■□□□□ 0.03
PFDN5-208ENST00000549995 A0A0G2JLW4 131 aa15.21■□□□□ 0.03
PFDN5-208ENST00000549995 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
PFDN5-208ENST00000549995 FKBP5Q13451 457 aaPredicted RBP15.21■□□□□ 0.03
PFDN5-208ENST00000549995 STYK1Q6J9G0 422 aa15.21■□□□□ 0.03
PFDN5-208ENST00000549995 SH3TC1Q8TE82 1336 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 CDHR2Q9BYE9 1310 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 H0YIN7 160 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
PFDN5-208ENST00000549995 CHRNA5P30532 468 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 HOXA10P31260 410 aaPredicted RBP15.2■□□□□ 0.02
PFDN5-208ENST00000549995 NUTM1Q86Y26 1132 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 C2CD5Q86YS7 1000 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 ZBTB38Q8NAP3 1195 aaPredicted RBP15.2■□□□□ 0.02
PFDN5-208ENST00000549995 LINS1Q8NG48 757 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 MYD88Q99836 296 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 PIM2Q9P1W9 311 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 SBF1O95248 1867 aa15.2■□□□□ 0.02
PFDN5-208ENST00000549995 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
PFDN5-208ENST00000549995 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
PFDN5-208ENST00000549995 PCCAP05165 728 aaPredicted RBP15.19■□□□□ 0.02
PFDN5-208ENST00000549995 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
PFDN5-208ENST00000549995 MASTLQ96GX5 879 aa15.19■□□□□ 0.02
PFDN5-208ENST00000549995 CWC25Q9NXE8 425 aaPredicted RBP15.19■□□□□ 0.02
PFDN5-208ENST00000549995 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
PFDN5-208ENST00000549995 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
PFDN5-208ENST00000549995 NPR1P16066 1061 aa15.18■□□□□ 0.02
PFDN5-208ENST00000549995 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
PFDN5-208ENST00000549995 CCDC24Q8N4L8 307 aa15.18■□□□□ 0.02
PFDN5-208ENST00000549995 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
PFDN5-208ENST00000549995 KIF16BQ96L93 1317 aa15.17■□□□□ 0.02
PFDN5-208ENST00000549995 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
PFDN5-208ENST00000549995 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
PFDN5-208ENST00000549995 CASP7P55210 303 aa15.17■□□□□ 0.02
PFDN5-208ENST00000549995 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
PFDN5-208ENST00000549995 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
PFDN5-208ENST00000549995 TAF1P21675 1872 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 COL4A1P02462 1669 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 RTL9Q8NET4 1388 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 H7C1W4 665 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 ALDH1L1O75891 902 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 GTF2E1P29083 439 aaPredicted RBP15.16■□□□□ 0.02
PFDN5-208ENST00000549995 GCKRQ14397 625 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 SF3B3Q15393 1217 aaKnown RBP15.16■□□□□ 0.02
PFDN5-208ENST00000549995 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
PFDN5-208ENST00000549995 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 TTLL6Q8N841 843 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 CNKSR1Q969H4 720 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 CRAMP1Q96RY5 1269 aa15.16■□□□□ 0.02
PFDN5-208ENST00000549995 F6X3S4 739 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 NPHP1O15259 732 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
PFDN5-208ENST00000549995 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 C7orf43Q8WVR3 580 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 FAM89AQ96GI7 184 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 PLA2G12BQ9BX93 195 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 UTYO14607 1347 aa15.15■□□□□ 0.02
PFDN5-208ENST00000549995 A0A1B0GUL6 1792 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
PFDN5-208ENST00000549995 ALDH1B1P30837 517 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 GPR162Q16538 588 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 BCL2L13Q9BXK5 485 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 CCDC88AQ3V6T2 1871 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 ABCC4O15439 1325 aa15.14■□□□□ 0.01
PFDN5-208ENST00000549995 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
PFDN5-208ENST00000549995 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
PFDN5-208ENST00000549995 BCS1LQ9Y276 419 aa15.13■□□□□ 0.01
PFDN5-208ENST00000549995 LTBP3Q9NS15 1303 aa15.13■□□□□ 0.01
PFDN5-208ENST00000549995 PDE8AO60658 829 aa15.12■□□□□ 0.01
PFDN5-208ENST00000549995 HCLS1P14317 486 aaPredicted RBP15.12■□□□□ 0.01
PFDN5-208ENST00000549995 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
PFDN5-208ENST00000549995 SRCIN1Q9C0H9 1055 aa15.12■□□□□ 0.01
PFDN5-208ENST00000549995 SPEF2Q9C093 1822 aa15.11■□□□□ 0.01
PFDN5-208ENST00000549995 SOGA3Q5TF21 947 aa15.11■□□□□ 0.01
PFDN5-208ENST00000549995 ZNF622Q969S3 477 aaKnown RBP eCLIP15.11■□□□□ 0.01
PFDN5-208ENST00000549995 RBM17Q96I25 401 aaKnown RBP15.11■□□□□ 0.01
PFDN5-208ENST00000549995 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
PFDN5-208ENST00000549995 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
PFDN5-208ENST00000549995 GRM8O00222 908 aa15.1■□□□□ 0.01
PFDN5-208ENST00000549995 BCAR3O75815 825 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms